Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1322 and Dsui_1323 are separated by 317 nucleotides Dsui_1323 and Dsui_1324 overlap by 13 nucleotides Dsui_1324 and Dsui_1325 are separated by 159 nucleotides Dsui_1325 and Dsui_1326 are separated by 54 nucleotides
Dsui_1322: Dsui_1322 - signal recognition particle protein, at 1,381,400 to 1,382,755
_1322
Dsui_1323: Dsui_1323 - soluble lytic murein transglycosylase-like protein, at 1,383,073 to 1,383,681
_1323
Dsui_1324: Dsui_1324 - prolyl-tRNA synthetase, family II, at 1,383,669 to 1,385,381
_1324
Dsui_1325: Dsui_1325 - ADP-ribose pyrophosphatase, at 1,385,541 to 1,386,065
_1325
Dsui_1326: Dsui_1326 - putative signal-transduction protein containing cAMP-binding and CBS domains, at 1,386,120 to 1,386,731
_1326
Position (kb)
1383
1384
1385
1386 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4
5 at 1382.707 kb on + strand at 1382.754 kb on + strand at 1382.774 kb on - strand at 1382.826 kb on + strand at 1382.831 kb on + strand at 1382.839 kb on - strand at 1382.851 kb on + strand at 1382.867 kb on + strand at 1382.867 kb on + strand at 1382.901 kb on - strand at 1382.971 kb on - strand at 1382.987 kb on + strand at 1382.988 kb on - strand at 1382.995 kb on - strand at 1383.002 kb on - strand at 1383.002 kb on - strand at 1383.026 kb on + strand at 1383.044 kb on + strand at 1383.049 kb on + strand at 1383.071 kb on + strand at 1383.071 kb on + strand at 1383.071 kb on + strand at 1383.079 kb on - strand at 1383.079 kb on - strand at 1383.122 kb on + strand at 1383.145 kb on - strand, within Dsui_1323 at 1383.150 kb on + strand, within Dsui_1323 at 1383.150 kb on + strand, within Dsui_1323 at 1383.158 kb on - strand, within Dsui_1323 at 1383.161 kb on + strand, within Dsui_1323 at 1383.187 kb on - strand, within Dsui_1323 at 1383.235 kb on - strand, within Dsui_1323 at 1383.264 kb on + strand, within Dsui_1323 at 1383.296 kb on - strand, within Dsui_1323 at 1383.318 kb on + strand, within Dsui_1323 at 1383.372 kb on - strand, within Dsui_1323 at 1383.411 kb on + strand, within Dsui_1323 at 1383.424 kb on - strand, within Dsui_1323 at 1383.439 kb on - strand, within Dsui_1323 at 1383.535 kb on + strand, within Dsui_1323 at 1383.571 kb on - strand, within Dsui_1323 at 1383.576 kb on - strand, within Dsui_1323 at 1383.576 kb on - strand, within Dsui_1323 at 1383.639 kb on + strand at 1383.647 kb on - strand at 1383.696 kb on - strand at 1385.442 kb on - strand at 1385.442 kb on - strand at 1385.541 kb on - strand at 1385.556 kb on + strand at 1385.645 kb on + strand, within Dsui_1325 at 1385.653 kb on - strand, within Dsui_1325 at 1385.656 kb on + strand, within Dsui_1325 at 1385.719 kb on - strand, within Dsui_1325 at 1385.894 kb on + strand, within Dsui_1325 at 1385.973 kb on - strand, within Dsui_1325 at 1386.009 kb on - strand, within Dsui_1325 at 1386.031 kb on + strand at 1386.031 kb on + strand at 1386.084 kb on + strand at 1386.084 kb on + strand at 1386.084 kb on + strand at 1386.092 kb on - strand at 1386.111 kb on - strand at 1386.112 kb on - strand at 1386.137 kb on + strand at 1386.137 kb on + strand at 1386.178 kb on + strand at 1386.215 kb on - strand, within Dsui_1326 at 1386.218 kb on + strand, within Dsui_1326 at 1386.218 kb on + strand, within Dsui_1326 at 1386.220 kb on - strand, within Dsui_1326 at 1386.220 kb on - strand, within Dsui_1326 at 1386.223 kb on + strand, within Dsui_1326 at 1386.239 kb on + strand, within Dsui_1326 at 1386.247 kb on - strand, within Dsui_1326 at 1386.274 kb on + strand, within Dsui_1326 at 1386.274 kb on + strand, within Dsui_1326 at 1386.274 kb on + strand, within Dsui_1326 at 1386.293 kb on + strand, within Dsui_1326 at 1386.305 kb on - strand, within Dsui_1326 at 1386.305 kb on - strand, within Dsui_1326 at 1386.311 kb on + strand, within Dsui_1326 at 1386.311 kb on + strand, within Dsui_1326 at 1386.311 kb on + strand, within Dsui_1326 at 1386.319 kb on - strand, within Dsui_1326 at 1386.319 kb on - strand, within Dsui_1326 at 1386.319 kb on - strand, within Dsui_1326 at 1386.330 kb on + strand, within Dsui_1326
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 1,382,707 + -1.1 1,382,754 + +0.6 1,382,774 - -0.9 1,382,826 + -3.4 1,382,831 + +0.8 1,382,839 - +0.3 1,382,851 + +0.3 1,382,867 + +0.7 1,382,867 + -0.8 1,382,901 - +0.5 1,382,971 - +0.7 1,382,987 + -0.9 1,382,988 - +0.6 1,382,995 - +4.9 1,383,002 - +0.2 1,383,002 - +0.5 1,383,026 + -0.6 1,383,044 + -0.1 1,383,049 + -2.0 1,383,071 + -1.8 1,383,071 + -0.1 1,383,071 + +0.4 1,383,079 - +1.1 1,383,079 - +0.3 1,383,122 + -1.0 1,383,145 - Dsui_1323 0.12 +0.2 1,383,150 + Dsui_1323 0.13 -1.1 1,383,150 + Dsui_1323 0.13 -0.6 1,383,158 - Dsui_1323 0.14 +0.1 1,383,161 + Dsui_1323 0.14 -3.2 1,383,187 - Dsui_1323 0.19 -0.8 1,383,235 - Dsui_1323 0.27 -0.3 1,383,264 + Dsui_1323 0.31 -1.0 1,383,296 - Dsui_1323 0.37 -2.6 1,383,318 + Dsui_1323 0.40 +0.8 1,383,372 - Dsui_1323 0.49 -0.3 1,383,411 + Dsui_1323 0.56 -3.7 1,383,424 - Dsui_1323 0.58 -0.4 1,383,439 - Dsui_1323 0.60 -0.1 1,383,535 + Dsui_1323 0.76 -1.8 1,383,571 - Dsui_1323 0.82 -0.8 1,383,576 - Dsui_1323 0.83 -1.3 1,383,576 - Dsui_1323 0.83 -1.1 1,383,639 + -0.8 1,383,647 - -1.5 1,383,696 - +0.6 1,385,442 - -0.9 1,385,442 - -2.1 1,385,541 - -1.8 1,385,556 + -4.4 1,385,645 + Dsui_1325 0.20 -1.9 1,385,653 - Dsui_1325 0.21 +1.5 1,385,656 + Dsui_1325 0.22 +0.4 1,385,719 - Dsui_1325 0.34 -1.9 1,385,894 + Dsui_1325 0.67 -0.9 1,385,973 - Dsui_1325 0.82 -3.1 1,386,009 - Dsui_1325 0.89 -4.8 1,386,031 + +0.5 1,386,031 + +2.0 1,386,084 + +2.7 1,386,084 + +1.4 1,386,084 + +1.7 1,386,092 - +0.2 1,386,111 - -1.4 1,386,112 - -4.1 1,386,137 + +1.4 1,386,137 + +0.5 1,386,178 + -0.1 1,386,215 - Dsui_1326 0.16 -0.8 1,386,218 + Dsui_1326 0.16 +0.3 1,386,218 + Dsui_1326 0.16 +1.4 1,386,220 - Dsui_1326 0.16 -0.4 1,386,220 - Dsui_1326 0.16 -1.3 1,386,223 + Dsui_1326 0.17 +0.8 1,386,239 + Dsui_1326 0.19 +0.8 1,386,247 - Dsui_1326 0.21 -1.1 1,386,274 + Dsui_1326 0.25 +0.8 1,386,274 + Dsui_1326 0.25 +0.1 1,386,274 + Dsui_1326 0.25 +0.9 1,386,293 + Dsui_1326 0.28 +1.0 1,386,305 - Dsui_1326 0.30 -2.4 1,386,305 - Dsui_1326 0.30 -0.1 1,386,311 + Dsui_1326 0.31 +2.0 1,386,311 + Dsui_1326 0.31 +0.8 1,386,311 + Dsui_1326 0.31 +0.1 1,386,319 - Dsui_1326 0.33 -4.8 1,386,319 - Dsui_1326 0.33 -3.5 1,386,319 - Dsui_1326 0.33 +0.2 1,386,330 + Dsui_1326 0.34 -3.1
Or see this region's nucleotide sequence