Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0588 and Dsui_0589 are separated by 11 nucleotides Dsui_0589 and Dsui_0590 are separated by 8 nucleotides Dsui_0590 and Dsui_0591 are separated by 91 nucleotides
Dsui_0588: Dsui_0588 - putative GTPase, G3E family, at 585,436 to 586,500
_0588
Dsui_0589: Dsui_0589 - putative GTPase, G3E family, at 586,512 to 587,507
_0589
Dsui_0590: Dsui_0590 - Fe2+/Zn2+ uptake regulation protein, at 587,516 to 587,956
_0590
Dsui_0591: Dsui_0591 - deoxyribodipyrimidine photolyase, at 588,048 to 589,496
_0591
Position (kb) 586
587
588 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 585.602 kb on - strand, within Dsui_0588 at 585.659 kb on + strand at 585.774 kb on - strand, within Dsui_0588 at 586.019 kb on - strand, within Dsui_0588 at 586.024 kb on - strand, within Dsui_0588 at 586.070 kb on - strand, within Dsui_0588 at 586.132 kb on + strand at 586.194 kb on + strand, within Dsui_0588 at 586.330 kb on + strand, within Dsui_0588 at 586.360 kb on + strand at 586.368 kb on - strand, within Dsui_0588 at 586.368 kb on - strand, within Dsui_0588 at 586.448 kb on - strand at 586.576 kb on - strand at 586.615 kb on + strand at 586.623 kb on - strand, within Dsui_0589 at 586.631 kb on + strand, within Dsui_0589 at 586.700 kb on + strand, within Dsui_0589 at 586.734 kb on - strand, within Dsui_0589 at 586.734 kb on - strand, within Dsui_0589 at 586.818 kb on + strand, within Dsui_0589 at 586.821 kb on + strand, within Dsui_0589 at 586.882 kb on - strand, within Dsui_0589 at 587.025 kb on - strand, within Dsui_0589 at 587.109 kb on - strand, within Dsui_0589 at 587.119 kb on - strand, within Dsui_0589 at 587.144 kb on - strand, within Dsui_0589 at 587.166 kb on + strand at 587.203 kb on + strand, within Dsui_0589 at 587.280 kb on - strand, within Dsui_0589 at 587.301 kb on - strand, within Dsui_0589 at 587.366 kb on - strand, within Dsui_0589 at 587.431 kb on - strand at 587.500 kb on - strand at 587.540 kb on - strand at 587.596 kb on + strand, within Dsui_0590 at 588.073 kb on + strand at 588.121 kb on + strand at 588.137 kb on - strand at 588.198 kb on + strand at 588.216 kb on - strand, within Dsui_0591 at 588.504 kb on - strand, within Dsui_0591
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 585,602 - Dsui_0588 0.16 +0.1 585,659 + -0.3 585,774 - Dsui_0588 0.32 +0.9 586,019 - Dsui_0588 0.55 +0.2 586,024 - Dsui_0588 0.55 +0.9 586,070 - Dsui_0588 0.60 +0.4 586,132 + +1.3 586,194 + Dsui_0588 0.71 +1.7 586,330 + Dsui_0588 0.84 +0.3 586,360 + +0.4 586,368 - Dsui_0588 0.88 +1.1 586,368 - Dsui_0588 0.88 +0.4 586,448 - +1.0 586,576 - +1.2 586,615 + +0.9 586,623 - Dsui_0589 0.11 +0.9 586,631 + Dsui_0589 0.12 -2.4 586,700 + Dsui_0589 0.19 +0.3 586,734 - Dsui_0589 0.22 -0.9 586,734 - Dsui_0589 0.22 +0.2 586,818 + Dsui_0589 0.31 -0.6 586,821 + Dsui_0589 0.31 +0.5 586,882 - Dsui_0589 0.37 +1.0 587,025 - Dsui_0589 0.52 +0.5 587,109 - Dsui_0589 0.60 -2.8 587,119 - Dsui_0589 0.61 +1.5 587,144 - Dsui_0589 0.63 -0.0 587,166 + -2.2 587,203 + Dsui_0589 0.69 +0.5 587,280 - Dsui_0589 0.77 -0.3 587,301 - Dsui_0589 0.79 -0.3 587,366 - Dsui_0589 0.86 +1.4 587,431 - +1.2 587,500 - +2.1 587,540 - +0.3 587,596 + Dsui_0590 0.18 -1.8 588,073 + -1.0 588,121 + -0.8 588,137 - +0.9 588,198 + -0.0 588,216 - Dsui_0591 0.12 +0.4 588,504 - Dsui_0591 0.31 -0.2
Or see this region's nucleotide sequence