Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19770 and BWI76_RS19775 are separated by 190 nucleotides BWI76_RS19775 and BWI76_RS19780 are separated by 70 nucleotides
BWI76_RS19770: BWI76_RS19770 - bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase, at 4,133,295 to 4,133,864
_RS19770
BWI76_RS19775: BWI76_RS19775 - phage resistance protein, at 4,134,055 to 4,135,617
_RS19775
BWI76_RS19780: BWI76_RS19780 - antibiotic ABC transporter substrate-binding protein, at 4,135,688 to 4,137,493
_RS19780
Position (kb) 4134
4135
4136 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4133.124 kb on - strand at 4133.124 kb on - strand at 4133.124 kb on - strand at 4133.281 kb on + strand at 4133.289 kb on - strand at 4133.289 kb on - strand at 4133.358 kb on + strand, within BWI76_RS19770 at 4133.366 kb on - strand, within BWI76_RS19770 at 4133.847 kb on + strand at 4134.051 kb on + strand at 4134.059 kb on - strand at 4134.202 kb on + strand at 4134.202 kb on + strand at 4134.202 kb on + strand at 4134.911 kb on + strand, within BWI76_RS19775 at 4134.919 kb on - strand, within BWI76_RS19775 at 4135.463 kb on - strand at 4135.637 kb on + strand at 4135.704 kb on + strand at 4135.757 kb on - strand at 4135.811 kb on - strand at 4135.811 kb on - strand at 4135.859 kb on - strand at 4135.932 kb on + strand, within BWI76_RS19780 at 4135.954 kb on - strand, within BWI76_RS19780 at 4136.348 kb on + strand, within BWI76_RS19780 at 4136.474 kb on + strand, within BWI76_RS19780
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 4,133,124 - -0.0 4,133,124 - +0.2 4,133,124 - +0.8 4,133,281 + -0.1 4,133,289 - -0.8 4,133,289 - +0.8 4,133,358 + BWI76_RS19770 0.11 +0.1 4,133,366 - BWI76_RS19770 0.12 +0.8 4,133,847 + +0.5 4,134,051 + +0.3 4,134,059 - -1.0 4,134,202 + +3.6 4,134,202 + +0.4 4,134,202 + -0.6 4,134,911 + BWI76_RS19775 0.55 +2.0 4,134,919 - BWI76_RS19775 0.55 +0.9 4,135,463 - +0.1 4,135,637 + -0.1 4,135,704 + -0.1 4,135,757 - -0.3 4,135,811 - +0.5 4,135,811 - -1.2 4,135,859 - -0.5 4,135,932 + BWI76_RS19780 0.14 +0.2 4,135,954 - BWI76_RS19780 0.15 -2.0 4,136,348 + BWI76_RS19780 0.37 -0.0 4,136,474 + BWI76_RS19780 0.44 +1.0
Or see this region's nucleotide sequence