Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19725

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19720 and BWI76_RS19725 are separated by 326 nucleotidesBWI76_RS19725 and BWI76_RS19730 are separated by 16 nucleotidesBWI76_RS19730 and BWI76_RS19735 are separated by 0 nucleotides BWI76_RS19720: BWI76_RS19720 - pseudouridine kinase, at 4,121,701 to 4,122,636 _RS19720 BWI76_RS19725: BWI76_RS19725 - PTS fructose transporter subunit EIIBC, at 4,122,963 to 4,124,639 _RS19725 BWI76_RS19730: BWI76_RS19730 - 1-phosphofructokinase, at 4,124,656 to 4,125,594 _RS19730 BWI76_RS19735: BWI76_RS19735 - bifunctional PTS fructose transporter subunit IIA/HPr protein, at 4,125,595 to 4,126,725 _RS19735 Position (kb) 4122 4123 4124 4125Strain fitness (log2 ratio) -3 -2 -1 0 1at 4122.040 kb on - strand, within BWI76_RS19720at 4122.087 kb on + strand, within BWI76_RS19720at 4122.088 kb on + strand, within BWI76_RS19720at 4122.089 kb on - strand, within BWI76_RS19720at 4122.127 kb on + strand, within BWI76_RS19720at 4122.127 kb on + strand, within BWI76_RS19720at 4122.135 kb on - strand, within BWI76_RS19720at 4122.159 kb on + strand, within BWI76_RS19720at 4122.167 kb on - strand, within BWI76_RS19720at 4122.182 kb on + strand, within BWI76_RS19720at 4122.182 kb on + strand, within BWI76_RS19720at 4122.182 kb on + strand, within BWI76_RS19720at 4122.182 kb on + strand, within BWI76_RS19720at 4122.190 kb on - strand, within BWI76_RS19720at 4122.190 kb on - strand, within BWI76_RS19720at 4122.190 kb on - strand, within BWI76_RS19720at 4122.190 kb on - strand, within BWI76_RS19720at 4122.190 kb on - strand, within BWI76_RS19720at 4122.190 kb on - strand, within BWI76_RS19720at 4122.192 kb on + strand, within BWI76_RS19720at 4122.195 kb on - strand, within BWI76_RS19720at 4122.200 kb on - strand, within BWI76_RS19720at 4122.200 kb on - strand, within BWI76_RS19720at 4122.222 kb on - strand, within BWI76_RS19720at 4122.258 kb on + strand, within BWI76_RS19720at 4122.258 kb on + strand, within BWI76_RS19720at 4122.266 kb on - strand, within BWI76_RS19720at 4122.266 kb on - strand, within BWI76_RS19720at 4122.266 kb on - strand, within BWI76_RS19720at 4122.266 kb on - strand, within BWI76_RS19720at 4122.266 kb on - strand, within BWI76_RS19720at 4122.266 kb on - strand, within BWI76_RS19720at 4122.282 kb on + strand, within BWI76_RS19720at 4122.282 kb on + strandat 4122.339 kb on + strand, within BWI76_RS19720at 4122.348 kb on + strand, within BWI76_RS19720at 4122.365 kb on + strand, within BWI76_RS19720at 4122.372 kb on - strand, within BWI76_RS19720at 4122.395 kb on + strandat 4122.395 kb on + strand, within BWI76_RS19720at 4122.395 kb on + strand, within BWI76_RS19720at 4122.395 kb on + strand, within BWI76_RS19720at 4122.395 kb on + strand, within BWI76_RS19720at 4122.395 kb on + strand, within BWI76_RS19720at 4122.395 kb on + strand, within BWI76_RS19720at 4122.403 kb on - strandat 4122.403 kb on - strand, within BWI76_RS19720at 4122.403 kb on - strand, within BWI76_RS19720at 4122.403 kb on - strand, within BWI76_RS19720at 4122.403 kb on - strand, within BWI76_RS19720at 4122.403 kb on - strand, within BWI76_RS19720at 4122.404 kb on - strand, within BWI76_RS19720at 4122.404 kb on - strand, within BWI76_RS19720at 4122.404 kb on - strand, within BWI76_RS19720at 4122.404 kb on - strand, within BWI76_RS19720at 4122.404 kb on - strand, within BWI76_RS19720at 4122.462 kb on - strand, within BWI76_RS19720at 4122.500 kb on + strand, within BWI76_RS19720at 4122.500 kb on + strand, within BWI76_RS19720at 4122.500 kb on + strand, within BWI76_RS19720at 4122.500 kb on + strand, within BWI76_RS19720at 4122.500 kb on + strand, within BWI76_RS19720at 4122.500 kb on + strand, within BWI76_RS19720at 4122.500 kb on + strand, within BWI76_RS19720at 4122.508 kb on - strand, within BWI76_RS19720at 4122.508 kb on - strand, within BWI76_RS19720at 4122.508 kb on - strand, within BWI76_RS19720at 4122.516 kb on - strand, within BWI76_RS19720at 4122.542 kb on + strand, within BWI76_RS19720at 4122.542 kb on + strand, within BWI76_RS19720at 4122.558 kb on + strandat 4122.810 kb on + strandat 4122.810 kb on + strandat 4122.812 kb on + strandat 4122.812 kb on + strandat 4122.812 kb on + strandat 4122.812 kb on + strandat 4122.820 kb on - strandat 4122.845 kb on + strandat 4122.855 kb on + strandat 4122.855 kb on + strandat 4122.876 kb on - strandat 4122.878 kb on + strandat 4122.891 kb on + strandat 4122.901 kb on + strandat 4122.909 kb on - strandat 4122.909 kb on - strandat 4122.931 kb on + strandat 4123.002 kb on + strandat 4123.010 kb on - strandat 4123.195 kb on - strand, within BWI76_RS19725at 4123.373 kb on - strand, within BWI76_RS19725at 4123.373 kb on - strand, within BWI76_RS19725at 4123.466 kb on + strand, within BWI76_RS19725at 4123.567 kb on + strand, within BWI76_RS19725at 4123.932 kb on + strand, within BWI76_RS19725at 4124.177 kb on + strand, within BWI76_RS19725at 4124.185 kb on - strand, within BWI76_RS19725at 4124.499 kb on - strandat 4124.598 kb on + strandat 4124.856 kb on + strand, within BWI76_RS19730at 4125.000 kb on + strand, within BWI76_RS19730at 4125.011 kb on + strand, within BWI76_RS19730at 4125.207 kb on - strand, within BWI76_RS19730

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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4,122,040 - BWI76_RS19720 0.36 +0.1
4,122,087 + BWI76_RS19720 0.41 -0.5
4,122,088 + BWI76_RS19720 0.41 +0.5
4,122,089 - BWI76_RS19720 0.41 -0.1
4,122,127 + BWI76_RS19720 0.46 -0.6
4,122,127 + BWI76_RS19720 0.46 -0.6
4,122,135 - BWI76_RS19720 0.46 -0.0
4,122,159 + BWI76_RS19720 0.49 +0.8
4,122,167 - BWI76_RS19720 0.50 -0.6
4,122,182 + BWI76_RS19720 0.51 +0.1
4,122,182 + BWI76_RS19720 0.51 +0.5
4,122,182 + BWI76_RS19720 0.51 -0.2
4,122,182 + BWI76_RS19720 0.51 -0.3
4,122,190 - BWI76_RS19720 0.52 -0.2
4,122,190 - BWI76_RS19720 0.52 -0.3
4,122,190 - BWI76_RS19720 0.52 +0.1
4,122,190 - BWI76_RS19720 0.52 -2.6
4,122,190 - BWI76_RS19720 0.52 -2.8
4,122,190 - BWI76_RS19720 0.52 +0.1
4,122,192 + BWI76_RS19720 0.52 -0.1
4,122,195 - BWI76_RS19720 0.53 +0.6
4,122,200 - BWI76_RS19720 0.53 +0.3
4,122,200 - BWI76_RS19720 0.53 +0.6
4,122,222 - BWI76_RS19720 0.56 -0.5
4,122,258 + BWI76_RS19720 0.60 +0.6
4,122,258 + BWI76_RS19720 0.60 +1.1
4,122,266 - BWI76_RS19720 0.60 -0.3
4,122,266 - BWI76_RS19720 0.60 +0.3
4,122,266 - BWI76_RS19720 0.60 -0.2
4,122,266 - BWI76_RS19720 0.60 -0.3
4,122,266 - BWI76_RS19720 0.60 -0.4
4,122,266 - BWI76_RS19720 0.60 -0.2
4,122,282 + BWI76_RS19720 0.62 -0.4
4,122,282 + -0.6
4,122,339 + BWI76_RS19720 0.68 +0.6
4,122,348 + BWI76_RS19720 0.69 -0.0
4,122,365 + BWI76_RS19720 0.71 +0.4
4,122,372 - BWI76_RS19720 0.72 +1.6
4,122,395 + -1.8
4,122,395 + BWI76_RS19720 0.74 -0.6
4,122,395 + BWI76_RS19720 0.74 +0.3
4,122,395 + BWI76_RS19720 0.74 -1.3
4,122,395 + BWI76_RS19720 0.74 +1.6
4,122,395 + BWI76_RS19720 0.74 +1.0
4,122,395 + BWI76_RS19720 0.74 -0.4
4,122,403 - +0.7
4,122,403 - BWI76_RS19720 0.75 -0.3
4,122,403 - BWI76_RS19720 0.75 -0.6
4,122,403 - BWI76_RS19720 0.75 +0.6
4,122,403 - BWI76_RS19720 0.75 +0.6
4,122,403 - BWI76_RS19720 0.75 -0.0
4,122,404 - BWI76_RS19720 0.75 +0.3
4,122,404 - BWI76_RS19720 0.75 -0.0
4,122,404 - BWI76_RS19720 0.75 -0.6
4,122,404 - BWI76_RS19720 0.75 -0.1
4,122,404 - BWI76_RS19720 0.75 +1.4
4,122,462 - BWI76_RS19720 0.81 +0.8
4,122,500 + BWI76_RS19720 0.85 +0.3
4,122,500 + BWI76_RS19720 0.85 -0.1
4,122,500 + BWI76_RS19720 0.85 +1.4
4,122,500 + BWI76_RS19720 0.85 +0.1
4,122,500 + BWI76_RS19720 0.85 -2.0
4,122,500 + BWI76_RS19720 0.85 +0.2
4,122,500 + BWI76_RS19720 0.85 +1.0
4,122,508 - BWI76_RS19720 0.86 -0.7
4,122,508 - BWI76_RS19720 0.86 +0.7
4,122,508 - BWI76_RS19720 0.86 +0.3
4,122,516 - BWI76_RS19720 0.87 +0.5
4,122,542 + BWI76_RS19720 0.90 +0.7
4,122,542 + BWI76_RS19720 0.90 -0.8
4,122,558 + -0.5
4,122,810 + -0.2
4,122,810 + +0.1
4,122,812 + +0.0
4,122,812 + +1.5
4,122,812 + +0.1
4,122,812 + +0.1
4,122,820 - -0.2
4,122,845 + +0.3
4,122,855 + +0.1
4,122,855 + +0.8
4,122,876 - +0.3
4,122,878 + -0.3
4,122,891 + -0.0
4,122,901 + -1.0
4,122,909 - +0.3
4,122,909 - -0.5
4,122,931 + -1.3
4,123,002 + -0.9
4,123,010 - -2.0
4,123,195 - BWI76_RS19725 0.14 -1.3
4,123,373 - BWI76_RS19725 0.24 -1.7
4,123,373 - BWI76_RS19725 0.24 -0.7
4,123,466 + BWI76_RS19725 0.30 -0.8
4,123,567 + BWI76_RS19725 0.36 -1.2
4,123,932 + BWI76_RS19725 0.58 -0.7
4,124,177 + BWI76_RS19725 0.72 -2.9
4,124,185 - BWI76_RS19725 0.73 -1.5
4,124,499 - -1.1
4,124,598 + -2.0
4,124,856 + BWI76_RS19730 0.21 -1.8
4,125,000 + BWI76_RS19730 0.37 -2.7
4,125,011 + BWI76_RS19730 0.38 -2.1
4,125,207 - BWI76_RS19730 0.59 -3.1

Or see this region's nucleotide sequence