Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19120 and BWI76_RS19125 are separated by 90 nucleotides BWI76_RS19125 and BWI76_RS19130 are separated by 114 nucleotides BWI76_RS19130 and BWI76_RS19135 are separated by 136 nucleotides
BWI76_RS19120: BWI76_RS19120 - dCTP deaminase, at 3,975,544 to 3,976,125
_RS19120
BWI76_RS19125: BWI76_RS19125 - uridine kinase, at 3,976,216 to 3,976,857
_RS19125
BWI76_RS19130: BWI76_RS19130 - 3-methyladenine DNA glycosylase 2, at 3,976,972 to 3,977,820
_RS19130
BWI76_RS19135: BWI76_RS19135 - molecular chaperone, at 3,977,957 to 3,979,309
_RS19135
Position (kb)
3976
3977
3978 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3976.696 kb on + strand, within BWI76_RS19125 at 3976.970 kb on - strand at 3977.038 kb on - strand at 3977.207 kb on - strand, within BWI76_RS19130 at 3977.207 kb on - strand, within BWI76_RS19130 at 3977.303 kb on - strand, within BWI76_RS19130 at 3977.330 kb on + strand, within BWI76_RS19130 at 3977.414 kb on - strand, within BWI76_RS19130 at 3977.460 kb on - strand, within BWI76_RS19130 at 3977.521 kb on - strand, within BWI76_RS19130 at 3977.624 kb on - strand, within BWI76_RS19130 at 3977.809 kb on - strand at 3977.854 kb on + strand at 3977.862 kb on - strand at 3978.346 kb on - strand, within BWI76_RS19135 at 3978.508 kb on + strand, within BWI76_RS19135 at 3978.717 kb on + strand, within BWI76_RS19135
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,976,696 + BWI76_RS19125 0.75 -1.8 3,976,970 - -0.6 3,977,038 - -0.4 3,977,207 - BWI76_RS19130 0.28 -0.6 3,977,207 - BWI76_RS19130 0.28 +1.1 3,977,303 - BWI76_RS19130 0.39 +1.2 3,977,330 + BWI76_RS19130 0.42 -0.4 3,977,414 - BWI76_RS19130 0.52 -1.9 3,977,460 - BWI76_RS19130 0.57 +2.0 3,977,521 - BWI76_RS19130 0.65 +0.6 3,977,624 - BWI76_RS19130 0.77 +0.2 3,977,809 - +0.2 3,977,854 + +0.6 3,977,862 - +1.0 3,978,346 - BWI76_RS19135 0.29 -0.2 3,978,508 + BWI76_RS19135 0.41 +0.1 3,978,717 + BWI76_RS19135 0.56 -0.2
Or see this region's nucleotide sequence