Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18665 and BWI76_RS18670 are separated by 12 nucleotides BWI76_RS18670 and BWI76_RS18675 are separated by 17 nucleotides BWI76_RS18675 and BWI76_RS18680 are separated by 109 nucleotides
BWI76_RS18665: BWI76_RS18665 - hypothetical protein, at 3,870,169 to 3,870,696
_RS18665
BWI76_RS18670: BWI76_RS18670 - hypothetical protein, at 3,870,709 to 3,871,212
_RS18670
BWI76_RS18675: BWI76_RS18675 - fimbrial protein, at 3,871,230 to 3,872,135
_RS18675
BWI76_RS18680: BWI76_RS18680 - EAL domain-containing protein, at 3,872,245 to 3,873,597
_RS18680
Position (kb)
3871
3872
3873 Strain fitness (log2 ratio)
-1
0
1 at 3870.808 kb on + strand, within BWI76_RS18670 at 3870.872 kb on + strand, within BWI76_RS18670 at 3871.055 kb on + strand, within BWI76_RS18670 at 3871.203 kb on - strand at 3871.203 kb on - strand at 3871.467 kb on - strand, within BWI76_RS18675 at 3871.598 kb on + strand, within BWI76_RS18675 at 3872.041 kb on + strand, within BWI76_RS18675 at 3872.121 kb on - strand at 3872.330 kb on - strand at 3872.465 kb on - strand, within BWI76_RS18680 at 3872.624 kb on - strand, within BWI76_RS18680 at 3872.914 kb on - strand, within BWI76_RS18680 at 3872.991 kb on - strand, within BWI76_RS18680 at 3873.036 kb on - strand, within BWI76_RS18680
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,870,808 + BWI76_RS18670 0.20 +0.1 3,870,872 + BWI76_RS18670 0.32 +0.5 3,871,055 + BWI76_RS18670 0.69 +0.2 3,871,203 - -0.2 3,871,203 - +0.0 3,871,467 - BWI76_RS18675 0.26 +1.2 3,871,598 + BWI76_RS18675 0.41 -0.1 3,872,041 + BWI76_RS18675 0.90 +0.4 3,872,121 - +0.1 3,872,330 - -0.2 3,872,465 - BWI76_RS18680 0.16 +0.5 3,872,624 - BWI76_RS18680 0.28 +0.3 3,872,914 - BWI76_RS18680 0.49 +0.2 3,872,991 - BWI76_RS18680 0.55 -0.5 3,873,036 - BWI76_RS18680 0.58 +1.5
Or see this region's nucleotide sequence