Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16795

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS16790 and BWI76_RS16795 are separated by 100 nucleotidesBWI76_RS16795 and BWI76_RS16800 overlap by 14 nucleotidesBWI76_RS16800 and BWI76_RS16805 are separated by 65 nucleotides BWI76_RS16790: BWI76_RS16790 - MFS transporter, at 3,481,340 to 3,482,545 _RS16790 BWI76_RS16795: BWI76_RS16795 - amino acid ABC transporter ATPase, at 3,482,646 to 3,483,368 _RS16795 BWI76_RS16800: BWI76_RS16800 - amino acid ABC transporter permease, at 3,483,355 to 3,484,119 _RS16800 BWI76_RS16805: BWI76_RS16805 - basic amino acid ABC transporter substrate-binding protein, at 3,484,185 to 3,484,952 _RS16805 Position (kb) 3482 3483 3484Strain fitness (log2 ratio) -1 0 1at 3481.739 kb on + strand, within BWI76_RS16790at 3482.057 kb on - strand, within BWI76_RS16790at 3482.057 kb on - strand, within BWI76_RS16790at 3482.144 kb on + strand, within BWI76_RS16790at 3482.144 kb on + strand, within BWI76_RS16790at 3482.144 kb on + strand, within BWI76_RS16790at 3482.258 kb on + strand, within BWI76_RS16790at 3482.537 kb on + strandat 3482.553 kb on - strandat 3482.718 kb on - strandat 3482.878 kb on - strand, within BWI76_RS16795at 3482.894 kb on + strand, within BWI76_RS16795at 3483.505 kb on - strand, within BWI76_RS16800at 3484.146 kb on + strandat 3484.161 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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3,481,739 + BWI76_RS16790 0.33 +1.0
3,482,057 - BWI76_RS16790 0.59 +0.1
3,482,057 - BWI76_RS16790 0.59 +0.6
3,482,144 + BWI76_RS16790 0.67 -0.5
3,482,144 + BWI76_RS16790 0.67 -1.0
3,482,144 + BWI76_RS16790 0.67 -0.1
3,482,258 + BWI76_RS16790 0.76 +0.8
3,482,537 + -0.2
3,482,553 - -0.2
3,482,718 - +0.4
3,482,878 - BWI76_RS16795 0.32 -0.6
3,482,894 + BWI76_RS16795 0.34 -0.8
3,483,505 - BWI76_RS16800 0.20 +0.4
3,484,146 + -0.1
3,484,161 + -0.7

Or see this region's nucleotide sequence