Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16625 and BWI76_RS16630 are separated by 18 nucleotides BWI76_RS16630 and BWI76_RS16635 are separated by 88 nucleotides BWI76_RS16635 and BWI76_RS16640 are separated by 225 nucleotides BWI76_RS16640 and BWI76_RS16645 are separated by 9 nucleotides
BWI76_RS16625: BWI76_RS16625 - putative oxidoreductase, at 3,442,415 to 3,443,299
_RS16625
BWI76_RS16630: BWI76_RS16630 - MBL fold metallo-hydrolase, at 3,443,318 to 3,444,124
_RS16630
BWI76_RS16635: BWI76_RS16635 - carbonate dehydratase, at 3,444,213 to 3,444,848
_RS16635
BWI76_RS16640: BWI76_RS16640 - threonine transporter, at 3,445,074 to 3,445,703
_RS16640
BWI76_RS16645: BWI76_RS16645 - DeoR family transcriptional regulator, at 3,445,713 to 3,446,483
_RS16645
Position (kb)
3444
3445 Strain fitness (log2 ratio)
-2
-1
0
1 at 3443.215 kb on + strand at 3443.399 kb on + strand, within BWI76_RS16630 at 3443.415 kb on + strand, within BWI76_RS16630 at 3443.588 kb on + strand, within BWI76_RS16630 at 3443.596 kb on - strand, within BWI76_RS16630 at 3443.596 kb on - strand, within BWI76_RS16630 at 3443.672 kb on - strand, within BWI76_RS16630 at 3443.779 kb on - strand, within BWI76_RS16630 at 3443.952 kb on + strand, within BWI76_RS16630 at 3444.163 kb on - strand at 3444.163 kb on - strand at 3444.163 kb on - strand at 3444.184 kb on + strand at 3444.202 kb on - strand at 3444.637 kb on - strand, within BWI76_RS16635 at 3444.637 kb on - strand, within BWI76_RS16635 at 3444.738 kb on - strand, within BWI76_RS16635 at 3444.963 kb on + strand at 3445.112 kb on - strand at 3445.124 kb on + strand at 3445.320 kb on - strand, within BWI76_RS16640 at 3445.342 kb on - strand, within BWI76_RS16640
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,443,215 + -0.1 3,443,399 + BWI76_RS16630 0.10 +1.2 3,443,415 + BWI76_RS16630 0.12 -0.6 3,443,588 + BWI76_RS16630 0.33 -0.3 3,443,596 - BWI76_RS16630 0.34 +0.2 3,443,596 - BWI76_RS16630 0.34 +1.1 3,443,672 - BWI76_RS16630 0.44 -0.2 3,443,779 - BWI76_RS16630 0.57 -0.1 3,443,952 + BWI76_RS16630 0.79 -0.0 3,444,163 - +0.0 3,444,163 - +0.2 3,444,163 - +0.0 3,444,184 + -0.2 3,444,202 - -2.1 3,444,637 - BWI76_RS16635 0.67 -1.8 3,444,637 - BWI76_RS16635 0.67 -0.9 3,444,738 - BWI76_RS16635 0.83 -0.7 3,444,963 + -0.2 3,445,112 - +0.1 3,445,124 + +0.2 3,445,320 - BWI76_RS16640 0.39 -0.2 3,445,342 - BWI76_RS16640 0.43 +0.8
Or see this region's nucleotide sequence