Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14670 and BWI76_RS14675 overlap by 86 nucleotides BWI76_RS14675 and BWI76_RS14680 are separated by 12 nucleotides BWI76_RS14680 and BWI76_RS14685 overlap by 1 nucleotides BWI76_RS14685 and BWI76_RS14690 are separated by 32 nucleotides
BWI76_RS14670: BWI76_RS14670 - hypothetical protein, at 3,081,092 to 3,081,697
_RS14670
BWI76_RS14675: BWI76_RS14675 - fimbrial chaperone YfcS, at 3,081,612 to 3,082,364
_RS14675
BWI76_RS14680: BWI76_RS14680 - SefF, at 3,082,377 to 3,082,901
_RS14680
BWI76_RS14685: BWI76_RS14685 - fimbrial protein, at 3,082,901 to 3,083,494
_RS14685
BWI76_RS14690: BWI76_RS14690 - SefD, at 3,083,527 to 3,084,261
_RS14690
Position (kb)
3082
3083 Strain fitness (log2 ratio)
-1
0
1 at 3081.736 kb on - strand, within BWI76_RS14675 at 3081.752 kb on - strand, within BWI76_RS14675 at 3081.752 kb on - strand, within BWI76_RS14675 at 3081.865 kb on + strand, within BWI76_RS14675 at 3081.935 kb on + strand at 3082.639 kb on - strand, within BWI76_RS14680 at 3082.708 kb on - strand, within BWI76_RS14680 at 3082.828 kb on - strand, within BWI76_RS14680 at 3082.871 kb on + strand at 3082.924 kb on + strand at 3083.280 kb on + strand, within BWI76_RS14685 at 3083.512 kb on - strand at 3083.712 kb on + strand, within BWI76_RS14690 at 3083.894 kb on - strand, within BWI76_RS14690
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,081,736 - BWI76_RS14675 0.16 +0.4 3,081,752 - BWI76_RS14675 0.19 -0.2 3,081,752 - BWI76_RS14675 0.19 -0.1 3,081,865 + BWI76_RS14675 0.34 -0.1 3,081,935 + +0.7 3,082,639 - BWI76_RS14680 0.50 -1.2 3,082,708 - BWI76_RS14680 0.63 -0.4 3,082,828 - BWI76_RS14680 0.86 -0.6 3,082,871 + -0.1 3,082,924 + +0.7 3,083,280 + BWI76_RS14685 0.64 -1.3 3,083,512 - +0.1 3,083,712 + BWI76_RS14690 0.25 -0.0 3,083,894 - BWI76_RS14690 0.50 -0.3
Or see this region's nucleotide sequence