Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2520 and Ac3H11_2521 are separated by 51 nucleotides Ac3H11_2521 and Ac3H11_2522 are separated by 372 nucleotides Ac3H11_2522 and Ac3H11_2523 are separated by 40 nucleotides
Ac3H11_2520 - 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC), at 795,691 to 797,550
_2520
Ac3H11_2521 - hypothetical protein, at 797,602 to 798,024
_2521
Ac3H11_2522 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 798,397 to 799,572
_2522
Ac3H11_2523 - Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3), at 799,613 to 801,712
_2523
Position (kb)
798
799
800 Strain fitness (log2 ratio)
-1
0
1 at 797.405 kb on + strand at 797.405 kb on + strand at 797.405 kb on + strand at 797.405 kb on + strand at 797.406 kb on - strand at 797.406 kb on - strand at 797.406 kb on - strand at 797.406 kb on - strand at 797.406 kb on - strand at 797.406 kb on - strand at 797.406 kb on - strand at 797.516 kb on + strand at 797.516 kb on + strand at 797.517 kb on - strand at 798.215 kb on + strand at 798.215 kb on + strand at 798.215 kb on + strand at 798.216 kb on - strand at 798.216 kb on - strand at 798.216 kb on - strand at 798.378 kb on + strand at 798.378 kb on + strand at 798.378 kb on + strand at 798.379 kb on - strand at 798.379 kb on - strand at 798.379 kb on - strand at 798.430 kb on - strand at 798.430 kb on - strand at 798.527 kb on + strand, within Ac3H11_2522 at 798.602 kb on + strand, within Ac3H11_2522 at 798.602 kb on + strand, within Ac3H11_2522 at 798.603 kb on - strand, within Ac3H11_2522 at 798.789 kb on - strand, within Ac3H11_2522 at 798.789 kb on - strand, within Ac3H11_2522 at 798.789 kb on - strand, within Ac3H11_2522 at 798.891 kb on + strand, within Ac3H11_2522 at 798.891 kb on + strand, within Ac3H11_2522 at 798.892 kb on - strand, within Ac3H11_2522 at 798.892 kb on - strand, within Ac3H11_2522 at 798.892 kb on - strand, within Ac3H11_2522 at 798.892 kb on - strand, within Ac3H11_2522 at 799.067 kb on + strand, within Ac3H11_2522 at 799.067 kb on + strand, within Ac3H11_2522 at 799.067 kb on + strand, within Ac3H11_2522 at 799.097 kb on + strand, within Ac3H11_2522 at 799.097 kb on + strand, within Ac3H11_2522 at 799.097 kb on + strand, within Ac3H11_2522 at 799.098 kb on - strand, within Ac3H11_2522 at 799.098 kb on - strand, within Ac3H11_2522 at 799.140 kb on - strand, within Ac3H11_2522 at 799.140 kb on - strand, within Ac3H11_2522 at 799.140 kb on - strand, within Ac3H11_2522 at 799.443 kb on + strand, within Ac3H11_2522 at 799.456 kb on + strand at 799.457 kb on - strand at 799.592 kb on + strand at 799.592 kb on + strand at 799.592 kb on + strand at 799.610 kb on + strand at 799.610 kb on + strand at 799.611 kb on - strand at 799.611 kb on - strand at 799.614 kb on + strand at 799.614 kb on + strand at 799.615 kb on - strand at 799.615 kb on - strand at 799.615 kb on - strand at 799.615 kb on - strand at 799.615 kb on - strand at 799.615 kb on - strand at 799.749 kb on + strand at 799.749 kb on + strand at 799.749 kb on + strand at 799.750 kb on - strand at 799.797 kb on + strand at 799.797 kb on + strand at 799.797 kb on + strand at 799.798 kb on - strand at 799.798 kb on - strand at 799.798 kb on - strand at 799.798 kb on - strand at 799.798 kb on - strand at 799.798 kb on - strand at 799.999 kb on - strand, within Ac3H11_2523 at 799.999 kb on - strand, within Ac3H11_2523 at 800.070 kb on + strand, within Ac3H11_2523 at 800.070 kb on + strand, within Ac3H11_2523 at 800.071 kb on - strand, within Ac3H11_2523 at 800.244 kb on + strand, within Ac3H11_2523 at 800.244 kb on + strand, within Ac3H11_2523 at 800.244 kb on + strand, within Ac3H11_2523 at 800.244 kb on + strand, within Ac3H11_2523 at 800.244 kb on + strand, within Ac3H11_2523 at 800.245 kb on - strand, within Ac3H11_2523 at 800.473 kb on + strand, within Ac3H11_2523 at 800.473 kb on + strand, within Ac3H11_2523 at 800.474 kb on - strand, within Ac3H11_2523 at 800.474 kb on - strand, within Ac3H11_2523 at 800.474 kb on - strand, within Ac3H11_2523 at 800.474 kb on - strand, within Ac3H11_2523 at 800.474 kb on - strand, within Ac3H11_2523 at 800.474 kb on - strand, within Ac3H11_2523
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 797,405 + +0.2 797,405 + +0.2 797,405 + -1.0 797,405 + -0.3 797,406 - +0.5 797,406 - -0.1 797,406 - +0.3 797,406 - +0.3 797,406 - -0.1 797,406 - +1.2 797,406 - -0.5 797,516 + -0.5 797,516 + -0.1 797,517 - -0.1 798,215 + -0.1 798,215 + +0.1 798,215 + -0.8 798,216 - +0.5 798,216 - +0.3 798,216 - +0.3 798,378 + -1.3 798,378 + -0.1 798,378 + -0.8 798,379 - -1.7 798,379 - -1.5 798,379 - +0.5 798,430 - +0.7 798,430 - -0.2 798,527 + Ac3H11_2522 0.11 +0.3 798,602 + Ac3H11_2522 0.17 -0.2 798,602 + Ac3H11_2522 0.17 -0.2 798,603 - Ac3H11_2522 0.18 -0.9 798,789 - Ac3H11_2522 0.33 +0.5 798,789 - Ac3H11_2522 0.33 -0.0 798,789 - Ac3H11_2522 0.33 +0.2 798,891 + Ac3H11_2522 0.42 +0.1 798,891 + Ac3H11_2522 0.42 -1.0 798,892 - Ac3H11_2522 0.42 -0.6 798,892 - Ac3H11_2522 0.42 +0.9 798,892 - Ac3H11_2522 0.42 -1.6 798,892 - Ac3H11_2522 0.42 +0.4 799,067 + Ac3H11_2522 0.57 -0.2 799,067 + Ac3H11_2522 0.57 +0.6 799,067 + Ac3H11_2522 0.57 +0.2 799,097 + Ac3H11_2522 0.60 +0.6 799,097 + Ac3H11_2522 0.60 +0.2 799,097 + Ac3H11_2522 0.60 -0.5 799,098 - Ac3H11_2522 0.60 -1.5 799,098 - Ac3H11_2522 0.60 +0.2 799,140 - Ac3H11_2522 0.63 -0.7 799,140 - Ac3H11_2522 0.63 -0.2 799,140 - Ac3H11_2522 0.63 -1.1 799,443 + Ac3H11_2522 0.89 +0.7 799,456 + +0.5 799,457 - -0.2 799,592 + -0.4 799,592 + +0.8 799,592 + +0.2 799,610 + +0.3 799,610 + +1.4 799,611 - +0.0 799,611 - +0.9 799,614 + +0.9 799,614 + +1.4 799,615 - -0.1 799,615 - +0.5 799,615 - +0.3 799,615 - +0.4 799,615 - -0.3 799,615 - -0.2 799,749 + -0.9 799,749 + +0.3 799,749 + -1.5 799,750 - -0.0 799,797 + -0.1 799,797 + +0.8 799,797 + -0.7 799,798 - -0.4 799,798 - +0.3 799,798 - -1.0 799,798 - +1.1 799,798 - -0.7 799,798 - +0.1 799,999 - Ac3H11_2523 0.18 -0.0 799,999 - Ac3H11_2523 0.18 +0.1 800,070 + Ac3H11_2523 0.22 -0.1 800,070 + Ac3H11_2523 0.22 +0.3 800,071 - Ac3H11_2523 0.22 +0.4 800,244 + Ac3H11_2523 0.30 +0.2 800,244 + Ac3H11_2523 0.30 +0.0 800,244 + Ac3H11_2523 0.30 +0.1 800,244 + Ac3H11_2523 0.30 -0.2 800,244 + Ac3H11_2523 0.30 +0.1 800,245 - Ac3H11_2523 0.30 +1.1 800,473 + Ac3H11_2523 0.41 -0.6 800,473 + Ac3H11_2523 0.41 -0.8 800,474 - Ac3H11_2523 0.41 +0.8 800,474 - Ac3H11_2523 0.41 +1.0 800,474 - Ac3H11_2523 0.41 -0.2 800,474 - Ac3H11_2523 0.41 -0.1 800,474 - Ac3H11_2523 0.41 -0.3 800,474 - Ac3H11_2523 0.41 -0.1
Or see this region's nucleotide sequence