Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1950 and Ac3H11_1951 overlap by 4 nucleotides Ac3H11_1951 and Ac3H11_1952 are separated by 92 nucleotides Ac3H11_1952 and Ac3H11_1953 are separated by 61 nucleotides
Ac3H11_1950 - TRAP-type C4-dicarboxylate transport system, large permease component, at 164,323 to 165,621
_1950
Ac3H11_1951 - TRAP-type C4-dicarboxylate transport system, small permease component, at 165,618 to 166,166
_1951
Ac3H11_1952 - hypothetical protein, at 166,259 to 166,387
_1952
Ac3H11_1953 - Transcriptional regulator, at 166,449 to 167,381
_1953
Position (kb) 165
166
167 Strain fitness (log2 ratio) -2
-1
0
1
2 at 164.851 kb on + strand, within Ac3H11_1950 at 164.851 kb on + strand, within Ac3H11_1950 at 164.852 kb on - strand, within Ac3H11_1950 at 164.852 kb on - strand, within Ac3H11_1950 at 164.852 kb on - strand, within Ac3H11_1950 at 164.852 kb on - strand, within Ac3H11_1950 at 164.864 kb on + strand, within Ac3H11_1950 at 164.864 kb on + strand, within Ac3H11_1950 at 164.864 kb on + strand, within Ac3H11_1950 at 164.865 kb on - strand, within Ac3H11_1950 at 165.134 kb on + strand, within Ac3H11_1950 at 165.134 kb on + strand, within Ac3H11_1950 at 165.135 kb on - strand, within Ac3H11_1950 at 165.449 kb on + strand, within Ac3H11_1950 at 165.449 kb on + strand, within Ac3H11_1950 at 165.467 kb on + strand, within Ac3H11_1950 at 165.467 kb on + strand, within Ac3H11_1950 at 165.468 kb on - strand, within Ac3H11_1950 at 165.468 kb on - strand, within Ac3H11_1950 at 165.656 kb on + strand at 165.656 kb on + strand at 165.657 kb on - strand at 165.657 kb on - strand at 165.657 kb on - strand at 165.730 kb on + strand, within Ac3H11_1951 at 165.730 kb on + strand, within Ac3H11_1951 at 165.731 kb on - strand, within Ac3H11_1951 at 165.731 kb on - strand, within Ac3H11_1951 at 165.896 kb on - strand, within Ac3H11_1951 at 165.896 kb on - strand, within Ac3H11_1951 at 165.896 kb on - strand, within Ac3H11_1951 at 166.016 kb on - strand, within Ac3H11_1951 at 166.073 kb on + strand, within Ac3H11_1951 at 166.276 kb on + strand, within Ac3H11_1952 at 166.276 kb on + strand, within Ac3H11_1952 at 166.276 kb on + strand, within Ac3H11_1952 at 166.277 kb on - strand, within Ac3H11_1952 at 166.277 kb on - strand, within Ac3H11_1952 at 166.290 kb on + strand, within Ac3H11_1952 at 166.290 kb on + strand, within Ac3H11_1952 at 166.392 kb on + strand at 166.393 kb on - strand at 166.393 kb on - strand at 166.641 kb on + strand, within Ac3H11_1953 at 166.641 kb on + strand, within Ac3H11_1953 at 166.887 kb on + strand, within Ac3H11_1953 at 166.929 kb on + strand, within Ac3H11_1953 at 166.930 kb on - strand, within Ac3H11_1953
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 164,851 + Ac3H11_1950 0.41 -0.0 164,851 + Ac3H11_1950 0.41 +0.9 164,852 - Ac3H11_1950 0.41 +0.1 164,852 - Ac3H11_1950 0.41 -1.0 164,852 - Ac3H11_1950 0.41 +2.1 164,852 - Ac3H11_1950 0.41 -0.1 164,864 + Ac3H11_1950 0.42 +0.2 164,864 + Ac3H11_1950 0.42 +0.0 164,864 + Ac3H11_1950 0.42 +0.1 164,865 - Ac3H11_1950 0.42 +0.3 165,134 + Ac3H11_1950 0.62 +0.1 165,134 + Ac3H11_1950 0.62 +0.4 165,135 - Ac3H11_1950 0.63 -0.8 165,449 + Ac3H11_1950 0.87 +0.6 165,449 + Ac3H11_1950 0.87 -0.2 165,467 + Ac3H11_1950 0.88 -0.3 165,467 + Ac3H11_1950 0.88 +0.1 165,468 - Ac3H11_1950 0.88 +1.5 165,468 - Ac3H11_1950 0.88 -0.5 165,656 + +0.7 165,656 + +1.1 165,657 - +0.2 165,657 - -0.5 165,657 - -0.2 165,730 + Ac3H11_1951 0.20 +0.2 165,730 + Ac3H11_1951 0.20 -0.1 165,731 - Ac3H11_1951 0.21 -0.2 165,731 - Ac3H11_1951 0.21 +0.2 165,896 - Ac3H11_1951 0.51 -0.1 165,896 - Ac3H11_1951 0.51 +0.9 165,896 - Ac3H11_1951 0.51 -0.1 166,016 - Ac3H11_1951 0.72 +1.0 166,073 + Ac3H11_1951 0.83 +0.5 166,276 + Ac3H11_1952 0.13 -1.0 166,276 + Ac3H11_1952 0.13 -0.7 166,276 + Ac3H11_1952 0.13 +1.3 166,277 - Ac3H11_1952 0.14 -0.9 166,277 - Ac3H11_1952 0.14 +0.7 166,290 + Ac3H11_1952 0.24 -0.5 166,290 + Ac3H11_1952 0.24 -1.3 166,392 + +0.0 166,393 - +0.8 166,393 - +1.8 166,641 + Ac3H11_1953 0.21 -1.5 166,641 + Ac3H11_1953 0.21 -0.5 166,887 + Ac3H11_1953 0.47 -0.4 166,929 + Ac3H11_1953 0.51 -1.8 166,930 - Ac3H11_1953 0.52 -0.8
Or see this region's nucleotide sequence