Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5205

Experiment: Uridine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf1N1B4_5204 and Pf1N1B4_5205 are separated by 81 nucleotidesPf1N1B4_5205 and Pf1N1B4_5206 are separated by 33 nucleotidesPf1N1B4_5206 and Pf1N1B4_5207 are separated by 252 nucleotides Pf1N1B4_5204 - Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA, at 3,231,014 to 3,232,542 _5204 Pf1N1B4_5205 - tRNA-Ile-GAT, at 3,232,624 to 3,232,697 _5205 Pf1N1B4_5206 - tRNA-Ala-TGC, at 3,232,731 to 3,232,803 _5206 Pf1N1B4_5207 - Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA, at 3,233,056 to 3,235,948 _5207 Position (kb) 3232 3233Strain fitness (log2 ratio) -1 0 1at 3233.571 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Uridine (C)
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3,233,571 + +0.1

Or see this region's nucleotide sequence