Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06454 and H281DRAFT_06455 are separated by 159 nucleotides H281DRAFT_06455 and H281DRAFT_06456 overlap by 102 nucleotides
H281DRAFT_06454: H281DRAFT_06454 - NAD(P)H-nitrite reductase, at 63,281 to 64,810
_06454
H281DRAFT_06455: H281DRAFT_06455 - transcriptional regulator, TraR/DksA family, at 64,970 to 65,350
_06455
H281DRAFT_06456: H281DRAFT_06456 - hypothetical protein, at 65,249 to 65,656
_06456
Position (kb) 63
64
65 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 62.326 kb on + strand at 62.326 kb on + strand at 62.327 kb on - strand at 62.327 kb on - strand at 62.327 kb on - strand at 62.327 kb on - strand at 62.327 kb on - strand at 62.330 kb on + strand at 62.331 kb on - strand at 62.511 kb on + strand at 62.592 kb on + strand at 62.593 kb on - strand at 62.840 kb on - strand at 62.868 kb on + strand at 62.869 kb on - strand at 62.869 kb on - strand at 63.048 kb on - strand at 63.177 kb on + strand at 63.177 kb on + strand at 63.383 kb on - strand at 63.713 kb on - strand, within H281DRAFT_06454 at 63.731 kb on + strand, within H281DRAFT_06454 at 63.754 kb on + strand, within H281DRAFT_06454 at 63.755 kb on - strand, within H281DRAFT_06454 at 63.755 kb on - strand, within H281DRAFT_06454 at 63.776 kb on + strand, within H281DRAFT_06454 at 63.854 kb on + strand, within H281DRAFT_06454 at 64.075 kb on + strand, within H281DRAFT_06454 at 64.231 kb on + strand, within H281DRAFT_06454 at 64.231 kb on + strand, within H281DRAFT_06454 at 64.237 kb on - strand, within H281DRAFT_06454 at 64.381 kb on - strand, within H281DRAFT_06454 at 64.417 kb on - strand, within H281DRAFT_06454 at 64.493 kb on - strand, within H281DRAFT_06454 at 64.502 kb on + strand, within H281DRAFT_06454 at 64.620 kb on - strand, within H281DRAFT_06454 at 64.620 kb on - strand, within H281DRAFT_06454 at 64.622 kb on - strand, within H281DRAFT_06454 at 64.638 kb on - strand, within H281DRAFT_06454 at 64.932 kb on - strand at 64.976 kb on - strand at 65.153 kb on + strand, within H281DRAFT_06455 at 65.153 kb on + strand, within H281DRAFT_06455 at 65.153 kb on + strand, within H281DRAFT_06455 at 65.153 kb on + strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.240 kb on + strand, within H281DRAFT_06455 at 65.241 kb on - strand, within H281DRAFT_06455 at 65.241 kb on - strand, within H281DRAFT_06455 at 65.258 kb on - strand at 65.258 kb on - strand at 65.490 kb on + strand, within H281DRAFT_06456 at 65.491 kb on - strand, within H281DRAFT_06456 at 65.498 kb on - strand, within H281DRAFT_06456 at 65.498 kb on - strand, within H281DRAFT_06456 at 65.500 kb on + strand, within H281DRAFT_06456 at 65.587 kb on - strand, within H281DRAFT_06456 at 65.688 kb on + strand at 65.734 kb on + strand at 65.806 kb on - strand at 65.806 kb on - strand at 65.806 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 62,326 + +1.1 62,326 + -0.2 62,327 - -0.1 62,327 - -1.1 62,327 - +0.1 62,327 - +0.2 62,327 - +0.2 62,330 + +0.2 62,331 - -1.1 62,511 + +0.3 62,592 + -0.4 62,593 - -1.6 62,840 - -3.1 62,868 + +1.4 62,869 - +0.1 62,869 - +0.6 63,048 - +1.4 63,177 + -0.7 63,177 + +0.1 63,383 - +0.0 63,713 - H281DRAFT_06454 0.28 +0.0 63,731 + H281DRAFT_06454 0.29 +0.3 63,754 + H281DRAFT_06454 0.31 -0.5 63,755 - H281DRAFT_06454 0.31 +0.6 63,755 - H281DRAFT_06454 0.31 -0.8 63,776 + H281DRAFT_06454 0.32 -0.1 63,854 + H281DRAFT_06454 0.37 -0.0 64,075 + H281DRAFT_06454 0.52 -0.2 64,231 + H281DRAFT_06454 0.62 -3.8 64,231 + H281DRAFT_06454 0.62 -0.2 64,237 - H281DRAFT_06454 0.62 -0.7 64,381 - H281DRAFT_06454 0.72 +0.4 64,417 - H281DRAFT_06454 0.74 +0.4 64,493 - H281DRAFT_06454 0.79 -0.2 64,502 + H281DRAFT_06454 0.80 +0.9 64,620 - H281DRAFT_06454 0.88 +0.3 64,620 - H281DRAFT_06454 0.88 +0.6 64,622 - H281DRAFT_06454 0.88 +0.8 64,638 - H281DRAFT_06454 0.89 -1.0 64,932 - -0.3 64,976 - -0.0 65,153 + H281DRAFT_06455 0.48 +0.3 65,153 + H281DRAFT_06455 0.48 -0.2 65,153 + H281DRAFT_06455 0.48 -1.6 65,153 + H281DRAFT_06455 0.48 +0.1 65,154 - H281DRAFT_06455 0.48 +0.8 65,154 - H281DRAFT_06455 0.48 +0.9 65,154 - H281DRAFT_06455 0.48 +0.7 65,154 - H281DRAFT_06455 0.48 +0.6 65,154 - H281DRAFT_06455 0.48 -1.6 65,154 - H281DRAFT_06455 0.48 +0.6 65,240 + H281DRAFT_06455 0.71 +0.5 65,241 - H281DRAFT_06455 0.71 +0.8 65,241 - H281DRAFT_06455 0.71 -0.7 65,258 - -0.2 65,258 - +0.3 65,490 + H281DRAFT_06456 0.59 -0.4 65,491 - H281DRAFT_06456 0.59 +0.9 65,498 - H281DRAFT_06456 0.61 -0.1 65,498 - H281DRAFT_06456 0.61 -0.5 65,500 + H281DRAFT_06456 0.62 -0.2 65,587 - H281DRAFT_06456 0.83 -0.9 65,688 + -0.5 65,734 + +0.8 65,806 - -0.5 65,806 - -2.1 65,806 - +0.2
Or see this region's nucleotide sequence