Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05454 and H281DRAFT_05455 are separated by 21 nucleotides H281DRAFT_05455 and H281DRAFT_05456 are separated by 7 nucleotides H281DRAFT_05456 and H281DRAFT_05457 overlap by 4 nucleotides H281DRAFT_05457 and H281DRAFT_05458 are separated by 41 nucleotides
H281DRAFT_05454: H281DRAFT_05454 - SnoaL-like domain-containing protein, at 34,894 to 35,355
_05454
H281DRAFT_05455: H281DRAFT_05455 - 2-keto-4-pentenoate hydratase, at 35,377 to 36,180
_05455
H281DRAFT_05456: H281DRAFT_05456 - 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase, at 36,188 to 37,063
_05456
H281DRAFT_05457: H281DRAFT_05457 - 2,3-dihydroxyphenylpropionate 1,2-dioxygenase, at 37,060 to 37,995
_05457
H281DRAFT_05458: H281DRAFT_05458 - Sugar phosphate permease, at 38,037 to 39,422
_05458
Position (kb) 36
37
38 Strain fitness (log2 ratio) -1
0
1
2 at 35.244 kb on - strand, within H281DRAFT_05454 at 35.345 kb on + strand at 35.346 kb on - strand at 35.346 kb on - strand at 35.404 kb on + strand at 35.642 kb on - strand, within H281DRAFT_05455 at 35.642 kb on - strand, within H281DRAFT_05455 at 35.775 kb on - strand, within H281DRAFT_05455 at 35.817 kb on + strand, within H281DRAFT_05455 at 36.051 kb on - strand, within H281DRAFT_05455 at 36.092 kb on + strand, within H281DRAFT_05455 at 36.125 kb on + strand at 36.125 kb on + strand at 36.144 kb on + strand at 36.172 kb on - strand at 36.490 kb on - strand, within H281DRAFT_05456 at 36.493 kb on + strand, within H281DRAFT_05456 at 36.494 kb on - strand, within H281DRAFT_05456 at 36.513 kb on - strand, within H281DRAFT_05456 at 36.944 kb on + strand, within H281DRAFT_05456 at 37.006 kb on - strand at 37.239 kb on + strand, within H281DRAFT_05457 at 37.397 kb on + strand, within H281DRAFT_05457 at 37.507 kb on + strand, within H281DRAFT_05457 at 37.767 kb on - strand, within H281DRAFT_05457 at 37.814 kb on + strand, within H281DRAFT_05457 at 37.999 kb on + strand at 37.999 kb on + strand at 38.039 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 35,244 - H281DRAFT_05454 0.76 +1.0 35,345 + -0.2 35,346 - -0.4 35,346 - +0.6 35,404 + +0.0 35,642 - H281DRAFT_05455 0.33 -0.1 35,642 - H281DRAFT_05455 0.33 +0.2 35,775 - H281DRAFT_05455 0.50 -1.4 35,817 + H281DRAFT_05455 0.55 +1.7 36,051 - H281DRAFT_05455 0.84 -0.9 36,092 + H281DRAFT_05455 0.89 -0.5 36,125 + +0.3 36,125 + -0.7 36,144 + -0.1 36,172 - -1.1 36,490 - H281DRAFT_05456 0.34 +1.6 36,493 + H281DRAFT_05456 0.35 +0.5 36,494 - H281DRAFT_05456 0.35 -0.6 36,513 - H281DRAFT_05456 0.37 +1.0 36,944 + H281DRAFT_05456 0.86 +1.8 37,006 - -0.5 37,239 + H281DRAFT_05457 0.19 +0.2 37,397 + H281DRAFT_05457 0.36 +2.2 37,507 + H281DRAFT_05457 0.48 +0.6 37,767 - H281DRAFT_05457 0.76 +1.0 37,814 + H281DRAFT_05457 0.81 -0.2 37,999 + +0.7 37,999 + +0.7 38,039 - +0.4
Or see this region's nucleotide sequence