Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04810 and H281DRAFT_04811 are separated by 267 nucleotides H281DRAFT_04811 and H281DRAFT_04812 are separated by 286 nucleotides H281DRAFT_04812 and H281DRAFT_04813 are separated by 245 nucleotides
H281DRAFT_04810: H281DRAFT_04810 - Sulfotransferase family protein, at 245,152 to 246,363
_04810
H281DRAFT_04811: H281DRAFT_04811 - hydroxymethylpyrimidine/phosphomethylpyrimidine kinase, at 246,631 to 247,491
_04811
H281DRAFT_04812: H281DRAFT_04812 - Rubredoxin, at 247,778 to 247,948
_04812
H281DRAFT_04813: H281DRAFT_04813 - hypothetical protein, at 248,194 to 249,603
_04813
Position (kb) 246
247
248 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 245.715 kb on - strand, within H281DRAFT_04810 at 245.737 kb on - strand, within H281DRAFT_04810 at 245.793 kb on + strand, within H281DRAFT_04810 at 246.099 kb on - strand, within H281DRAFT_04810 at 246.104 kb on + strand, within H281DRAFT_04810 at 246.112 kb on + strand, within H281DRAFT_04810 at 246.112 kb on + strand, within H281DRAFT_04810 at 246.113 kb on - strand, within H281DRAFT_04810 at 246.149 kb on + strand, within H281DRAFT_04810 at 246.174 kb on + strand, within H281DRAFT_04810 at 246.174 kb on + strand, within H281DRAFT_04810 at 246.174 kb on + strand, within H281DRAFT_04810 at 246.174 kb on + strand, within H281DRAFT_04810 at 246.180 kb on + strand, within H281DRAFT_04810 at 246.180 kb on + strand, within H281DRAFT_04810 at 246.181 kb on - strand, within H281DRAFT_04810 at 246.185 kb on + strand, within H281DRAFT_04810 at 246.186 kb on - strand, within H281DRAFT_04810 at 246.220 kb on + strand, within H281DRAFT_04810 at 246.220 kb on + strand, within H281DRAFT_04810 at 246.265 kb on + strand at 246.289 kb on - strand at 246.363 kb on + strand at 246.364 kb on - strand at 246.364 kb on - strand at 246.379 kb on - strand at 246.421 kb on + strand at 246.422 kb on - strand at 246.422 kb on - strand at 246.428 kb on + strand at 246.471 kb on + strand at 246.724 kb on - strand, within H281DRAFT_04811 at 246.725 kb on + strand, within H281DRAFT_04811 at 246.725 kb on + strand, within H281DRAFT_04811 at 246.725 kb on + strand, within H281DRAFT_04811 at 246.767 kb on + strand, within H281DRAFT_04811 at 246.773 kb on + strand, within H281DRAFT_04811 at 246.773 kb on + strand, within H281DRAFT_04811 at 246.927 kb on + strand, within H281DRAFT_04811 at 246.928 kb on - strand, within H281DRAFT_04811 at 246.928 kb on - strand, within H281DRAFT_04811 at 246.969 kb on - strand, within H281DRAFT_04811 at 247.204 kb on + strand, within H281DRAFT_04811 at 247.204 kb on + strand, within H281DRAFT_04811 at 247.225 kb on + strand, within H281DRAFT_04811 at 247.226 kb on - strand at 247.226 kb on - strand, within H281DRAFT_04811 at 247.226 kb on - strand, within H281DRAFT_04811 at 247.359 kb on + strand, within H281DRAFT_04811 at 247.359 kb on + strand, within H281DRAFT_04811 at 247.359 kb on + strand, within H281DRAFT_04811 at 247.360 kb on - strand, within H281DRAFT_04811 at 247.360 kb on - strand, within H281DRAFT_04811 at 247.361 kb on + strand, within H281DRAFT_04811 at 247.513 kb on - strand at 247.547 kb on + strand at 247.548 kb on - strand at 247.548 kb on - strand at 247.556 kb on + strand at 247.709 kb on - strand at 247.709 kb on - strand at 247.709 kb on - strand at 247.771 kb on + strand at 247.771 kb on + strand at 248.043 kb on + strand at 248.044 kb on - strand at 248.044 kb on - strand at 248.044 kb on - strand at 248.134 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 245,715 - H281DRAFT_04810 0.46 +0.1 245,737 - H281DRAFT_04810 0.48 +0.5 245,793 + H281DRAFT_04810 0.53 -0.3 246,099 - H281DRAFT_04810 0.78 +0.8 246,104 + H281DRAFT_04810 0.79 -0.2 246,112 + H281DRAFT_04810 0.79 +1.1 246,112 + H281DRAFT_04810 0.79 -0.2 246,113 - H281DRAFT_04810 0.79 -0.7 246,149 + H281DRAFT_04810 0.82 +1.4 246,174 + H281DRAFT_04810 0.84 -0.0 246,174 + H281DRAFT_04810 0.84 -1.1 246,174 + H281DRAFT_04810 0.84 -0.4 246,174 + H281DRAFT_04810 0.84 -0.3 246,180 + H281DRAFT_04810 0.85 -0.9 246,180 + H281DRAFT_04810 0.85 +1.3 246,181 - H281DRAFT_04810 0.85 +0.4 246,185 + H281DRAFT_04810 0.85 -3.3 246,186 - H281DRAFT_04810 0.85 +0.3 246,220 + H281DRAFT_04810 0.88 +0.5 246,220 + H281DRAFT_04810 0.88 -0.9 246,265 + +0.4 246,289 - -0.9 246,363 + +1.5 246,364 - +0.2 246,364 - -0.1 246,379 - -1.1 246,421 + +0.3 246,422 - +0.3 246,422 - -0.8 246,428 + +0.4 246,471 + -0.9 246,724 - H281DRAFT_04811 0.11 +0.2 246,725 + H281DRAFT_04811 0.11 +1.0 246,725 + H281DRAFT_04811 0.11 -1.7 246,725 + H281DRAFT_04811 0.11 +1.0 246,767 + H281DRAFT_04811 0.16 -1.5 246,773 + H281DRAFT_04811 0.16 +0.1 246,773 + H281DRAFT_04811 0.16 -0.4 246,927 + H281DRAFT_04811 0.34 -0.8 246,928 - H281DRAFT_04811 0.34 -0.7 246,928 - H281DRAFT_04811 0.34 -0.4 246,969 - H281DRAFT_04811 0.39 -0.4 247,204 + H281DRAFT_04811 0.67 -0.1 247,204 + H281DRAFT_04811 0.67 -0.4 247,225 + H281DRAFT_04811 0.69 -1.7 247,226 - +1.0 247,226 - H281DRAFT_04811 0.69 -0.7 247,226 - H281DRAFT_04811 0.69 +0.6 247,359 + H281DRAFT_04811 0.85 -0.3 247,359 + H281DRAFT_04811 0.85 -0.0 247,359 + H281DRAFT_04811 0.85 -0.0 247,360 - H281DRAFT_04811 0.85 +0.6 247,360 - H281DRAFT_04811 0.85 -0.6 247,361 + H281DRAFT_04811 0.85 +1.6 247,513 - +0.6 247,547 + +0.4 247,548 - -0.3 247,548 - +0.3 247,556 + +0.7 247,709 - -0.3 247,709 - -0.8 247,709 - +1.3 247,771 + -0.6 247,771 + -1.0 248,043 + +0.7 248,044 - +0.7 248,044 - -0.4 248,044 - -1.4 248,134 + -0.0
Or see this region's nucleotide sequence