Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04446 and H281DRAFT_04447 are separated by 221 nucleotides H281DRAFT_04447 and H281DRAFT_04448 are separated by 480 nucleotides
H281DRAFT_04446: H281DRAFT_04446 - transcriptional regulator, LysR family, at 166,317 to 167,276
_04446
H281DRAFT_04447: H281DRAFT_04447 - Uncharacterised MFS-type transporter YbfB, at 167,498 to 169,060
_04447
H281DRAFT_04448: H281DRAFT_04448 - L-threonine aldolase, at 169,541 to 170,572
_04448
Position (kb) 167
168
169
170 Strain fitness (log2 ratio) -2
-1
0
1
2 at 166.612 kb on + strand, within H281DRAFT_04446 at 166.613 kb on - strand, within H281DRAFT_04446 at 166.613 kb on - strand, within H281DRAFT_04446 at 166.660 kb on + strand, within H281DRAFT_04446 at 166.676 kb on - strand, within H281DRAFT_04446 at 166.676 kb on - strand, within H281DRAFT_04446 at 167.132 kb on + strand, within H281DRAFT_04446 at 167.339 kb on + strand at 167.339 kb on + strand at 167.339 kb on + strand at 167.340 kb on - strand at 167.340 kb on - strand at 167.342 kb on + strand at 167.342 kb on + strand at 167.343 kb on - strand at 167.343 kb on - strand at 167.343 kb on - strand at 167.348 kb on + strand at 167.348 kb on + strand at 167.349 kb on - strand at 167.349 kb on - strand at 167.542 kb on + strand at 167.542 kb on + strand at 167.681 kb on + strand, within H281DRAFT_04447 at 167.691 kb on - strand, within H281DRAFT_04447 at 167.760 kb on + strand, within H281DRAFT_04447 at 167.761 kb on - strand, within H281DRAFT_04447 at 167.761 kb on - strand, within H281DRAFT_04447 at 167.931 kb on - strand, within H281DRAFT_04447 at 168.124 kb on - strand, within H281DRAFT_04447 at 168.124 kb on - strand, within H281DRAFT_04447 at 168.181 kb on - strand, within H281DRAFT_04447 at 168.214 kb on + strand, within H281DRAFT_04447 at 168.215 kb on - strand, within H281DRAFT_04447 at 168.215 kb on - strand, within H281DRAFT_04447 at 168.215 kb on - strand, within H281DRAFT_04447 at 168.513 kb on - strand, within H281DRAFT_04447 at 168.542 kb on - strand, within H281DRAFT_04447 at 168.701 kb on + strand, within H281DRAFT_04447 at 168.702 kb on - strand, within H281DRAFT_04447 at 168.702 kb on - strand, within H281DRAFT_04447 at 168.802 kb on + strand at 168.802 kb on + strand, within H281DRAFT_04447 at 168.803 kb on - strand, within H281DRAFT_04447 at 168.803 kb on - strand, within H281DRAFT_04447 at 168.866 kb on + strand, within H281DRAFT_04447 at 169.003 kb on - strand at 169.148 kb on - strand at 169.246 kb on + strand at 169.246 kb on + strand at 169.246 kb on + strand at 169.246 kb on + strand at 169.247 kb on - strand at 169.247 kb on - strand at 169.247 kb on - strand at 169.247 kb on - strand at 169.247 kb on - strand at 169.247 kb on - strand at 169.247 kb on - strand at 169.273 kb on + strand at 169.282 kb on - strand at 169.479 kb on + strand at 169.566 kb on - strand at 169.635 kb on - strand at 169.986 kb on - strand, within H281DRAFT_04448 at 170.048 kb on - strand, within H281DRAFT_04448 at 170.048 kb on - strand, within H281DRAFT_04448
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 166,612 + H281DRAFT_04446 0.31 +1.1 166,613 - H281DRAFT_04446 0.31 -0.1 166,613 - H281DRAFT_04446 0.31 +1.1 166,660 + H281DRAFT_04446 0.36 +0.3 166,676 - H281DRAFT_04446 0.37 +0.6 166,676 - H281DRAFT_04446 0.37 +0.3 167,132 + H281DRAFT_04446 0.85 +0.1 167,339 + -0.2 167,339 + +0.5 167,339 + -0.1 167,340 - +0.5 167,340 - -0.8 167,342 + -0.3 167,342 + -2.2 167,343 - +0.3 167,343 - +0.1 167,343 - +0.4 167,348 + +1.1 167,348 + +1.1 167,349 - +0.4 167,349 - +0.5 167,542 + +0.1 167,542 + +0.0 167,681 + H281DRAFT_04447 0.12 -0.0 167,691 - H281DRAFT_04447 0.12 +0.2 167,760 + H281DRAFT_04447 0.17 +0.8 167,761 - H281DRAFT_04447 0.17 +0.1 167,761 - H281DRAFT_04447 0.17 -0.3 167,931 - H281DRAFT_04447 0.28 -1.0 168,124 - H281DRAFT_04447 0.40 +0.6 168,124 - H281DRAFT_04447 0.40 +0.4 168,181 - H281DRAFT_04447 0.44 -1.0 168,214 + H281DRAFT_04447 0.46 -0.2 168,215 - H281DRAFT_04447 0.46 -0.4 168,215 - H281DRAFT_04447 0.46 -0.7 168,215 - H281DRAFT_04447 0.46 +0.2 168,513 - H281DRAFT_04447 0.65 -0.9 168,542 - H281DRAFT_04447 0.67 -0.2 168,701 + H281DRAFT_04447 0.77 +1.9 168,702 - H281DRAFT_04447 0.77 +0.5 168,702 - H281DRAFT_04447 0.77 +1.5 168,802 + -0.1 168,802 + H281DRAFT_04447 0.83 -0.3 168,803 - H281DRAFT_04447 0.83 -0.3 168,803 - H281DRAFT_04447 0.83 -0.5 168,866 + H281DRAFT_04447 0.88 +0.3 169,003 - -0.5 169,148 - -0.3 169,246 + -0.3 169,246 + +0.1 169,246 + -1.4 169,246 + -0.3 169,247 - +0.1 169,247 - -0.1 169,247 - +0.4 169,247 - +0.3 169,247 - -1.0 169,247 - +0.1 169,247 - -0.5 169,273 + -0.2 169,282 - +0.5 169,479 + +0.8 169,566 - +0.8 169,635 - -0.7 169,986 - H281DRAFT_04448 0.43 +0.2 170,048 - H281DRAFT_04448 0.49 +0.8 170,048 - H281DRAFT_04448 0.49 +0.6
Or see this region's nucleotide sequence