Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04421 and H281DRAFT_04422 are separated by 255 nucleotides H281DRAFT_04422 and H281DRAFT_04423 are separated by 73 nucleotides H281DRAFT_04423 and H281DRAFT_04424 are separated by 379 nucleotides H281DRAFT_04424 and H281DRAFT_04425 are separated by 235 nucleotides H281DRAFT_04425 and H281DRAFT_04426 are separated by 31 nucleotides
H281DRAFT_04421: H281DRAFT_04421 - phosphohistidine phosphatase, SixA, at 142,236 to 142,694
_04421
H281DRAFT_04422: H281DRAFT_04422 - tRNA_Pro_TGG, at 142,950 to 143,026
_04422
H281DRAFT_04423: H281DRAFT_04423 - Protein of unknown function (DUF3309), at 143,100 to 143,258
_04423
H281DRAFT_04424: H281DRAFT_04424 - hypothetical protein, at 143,638 to 143,814
_04424
H281DRAFT_04425: H281DRAFT_04425 - hypothetical protein, at 144,050 to 144,217
_04425
H281DRAFT_04426: H281DRAFT_04426 - multidrug resistance protein, MATE family, at 144,249 to 145,601
_04426
Position (kb)
143
144 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 143.053 kb on - strand at 143.093 kb on - strand at 143.103 kb on + strand at 143.103 kb on + strand at 143.103 kb on + strand at 143.103 kb on + strand at 143.103 kb on + strand at 143.104 kb on - strand at 143.390 kb on + strand at 143.398 kb on + strand at 143.398 kb on + strand at 143.399 kb on - strand at 143.399 kb on - strand at 143.726 kb on + strand, within H281DRAFT_04424 at 143.726 kb on + strand, within H281DRAFT_04424 at 143.727 kb on - strand, within H281DRAFT_04424 at 143.727 kb on - strand, within H281DRAFT_04424 at 143.846 kb on + strand at 143.846 kb on + strand at 143.848 kb on + strand at 143.848 kb on + strand at 143.848 kb on + strand at 143.848 kb on + strand at 143.848 kb on + strand at 143.849 kb on - strand at 143.849 kb on - strand at 143.849 kb on - strand at 143.849 kb on - strand at 143.851 kb on + strand at 143.851 kb on + strand at 143.852 kb on - strand at 143.852 kb on - strand at 143.852 kb on - strand at 143.852 kb on - strand at 143.852 kb on - strand at 143.918 kb on - strand at 144.155 kb on + strand, within H281DRAFT_04425 at 144.251 kb on - strand at 144.353 kb on - strand at 144.463 kb on + strand, within H281DRAFT_04426 at 144.464 kb on - strand, within H281DRAFT_04426 at 144.464 kb on - strand, within H281DRAFT_04426 at 144.508 kb on + strand, within H281DRAFT_04426 at 144.580 kb on + strand, within H281DRAFT_04426 at 144.581 kb on - strand, within H281DRAFT_04426 at 144.627 kb on - strand, within H281DRAFT_04426 at 144.722 kb on - strand, within H281DRAFT_04426
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 143,053 - -0.4 143,093 - -0.3 143,103 + +0.6 143,103 + +0.8 143,103 + +1.2 143,103 + -0.0 143,103 + +0.1 143,104 - +0.6 143,390 + -0.1 143,398 + +0.0 143,398 + -0.7 143,399 - -0.1 143,399 - +0.1 143,726 + H281DRAFT_04424 0.50 +2.1 143,726 + H281DRAFT_04424 0.50 +0.3 143,727 - H281DRAFT_04424 0.50 +0.1 143,727 - H281DRAFT_04424 0.50 +0.5 143,846 + -1.2 143,846 + +1.0 143,848 + -0.1 143,848 + -0.9 143,848 + -0.3 143,848 + -1.3 143,848 + +0.7 143,849 - -0.4 143,849 - -0.3 143,849 - -0.3 143,849 - -0.1 143,851 + +0.7 143,851 + +0.3 143,852 - +0.3 143,852 - -1.8 143,852 - -0.1 143,852 - +0.4 143,852 - +0.9 143,918 - +0.3 144,155 + H281DRAFT_04425 0.62 -0.2 144,251 - +0.7 144,353 - +1.6 144,463 + H281DRAFT_04426 0.16 -0.2 144,464 - H281DRAFT_04426 0.16 -0.8 144,464 - H281DRAFT_04426 0.16 +1.6 144,508 + H281DRAFT_04426 0.19 -0.2 144,580 + H281DRAFT_04426 0.24 +0.6 144,581 - H281DRAFT_04426 0.25 -0.0 144,627 - H281DRAFT_04426 0.28 +1.0 144,722 - H281DRAFT_04426 0.35 +1.4
Or see this region's nucleotide sequence