Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03957 and H281DRAFT_03958 are separated by 159 nucleotides H281DRAFT_03958 and H281DRAFT_03959 are separated by 62 nucleotides H281DRAFT_03959 and H281DRAFT_03960 are separated by 124 nucleotides
H281DRAFT_03957: H281DRAFT_03957 - D-galactonate transporter, at 59,952 to 61,301
_03957
H281DRAFT_03958: H281DRAFT_03958 - DNA-binding transcriptional regulator, GntR family, at 61,461 to 62,141
_03958
H281DRAFT_03959: H281DRAFT_03959 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 62,204 to 63,583
_03959
H281DRAFT_03960: H281DRAFT_03960 - disulfide bond formation protein DsbB, at 63,708 to 64,217
_03960
Position (kb) 62
63
64 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 61.305 kb on - strand at 61.310 kb on + strand at 61.310 kb on + strand at 61.310 kb on + strand at 61.311 kb on - strand at 61.311 kb on - strand at 61.311 kb on - strand at 61.424 kb on + strand at 61.424 kb on + strand at 61.424 kb on + strand at 61.771 kb on - strand, within H281DRAFT_03958 at 61.771 kb on - strand, within H281DRAFT_03958 at 61.771 kb on - strand, within H281DRAFT_03958 at 61.812 kb on + strand, within H281DRAFT_03958 at 61.813 kb on - strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.871 kb on - strand, within H281DRAFT_03958 at 61.871 kb on - strand, within H281DRAFT_03958 at 62.102 kb on + strand at 62.152 kb on + strand at 62.152 kb on + strand at 62.162 kb on - strand at 62.165 kb on + strand at 62.165 kb on + strand at 62.166 kb on - strand at 62.415 kb on + strand, within H281DRAFT_03959 at 62.415 kb on + strand, within H281DRAFT_03959 at 62.415 kb on + strand, within H281DRAFT_03959 at 62.416 kb on - strand, within H281DRAFT_03959 at 62.552 kb on - strand, within H281DRAFT_03959 at 62.587 kb on + strand, within H281DRAFT_03959 at 62.588 kb on - strand, within H281DRAFT_03959 at 62.664 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959 at 63.149 kb on + strand, within H281DRAFT_03959 at 63.149 kb on + strand, within H281DRAFT_03959 at 63.150 kb on - strand, within H281DRAFT_03959 at 63.192 kb on - strand, within H281DRAFT_03959 at 63.192 kb on - strand, within H281DRAFT_03959 at 63.192 kb on - strand, within H281DRAFT_03959 at 63.637 kb on + strand at 63.687 kb on + strand at 63.688 kb on - strand at 64.233 kb on + strand at 64.251 kb on + strand at 64.251 kb on + strand at 64.306 kb on + strand at 64.307 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 61,305 - +0.0 61,310 + -0.6 61,310 + +0.2 61,310 + +0.6 61,311 - +0.3 61,311 - +0.3 61,311 - -0.0 61,424 + -0.5 61,424 + +0.3 61,424 + +2.6 61,771 - H281DRAFT_03958 0.46 +0.5 61,771 - H281DRAFT_03958 0.46 -0.3 61,771 - H281DRAFT_03958 0.46 -0.7 61,812 + H281DRAFT_03958 0.52 -0.2 61,813 - H281DRAFT_03958 0.52 -1.1 61,870 + H281DRAFT_03958 0.60 +0.1 61,870 + H281DRAFT_03958 0.60 -0.3 61,870 + H281DRAFT_03958 0.60 -2.8 61,870 + H281DRAFT_03958 0.60 -1.0 61,870 + H281DRAFT_03958 0.60 -1.1 61,871 - H281DRAFT_03958 0.60 +0.3 61,871 - H281DRAFT_03958 0.60 -0.1 62,102 + +0.3 62,152 + +0.2 62,152 + +0.8 62,162 - -1.0 62,165 + +0.8 62,165 + -1.1 62,166 - +0.0 62,415 + H281DRAFT_03959 0.15 -0.1 62,415 + H281DRAFT_03959 0.15 -1.3 62,415 + H281DRAFT_03959 0.15 -0.9 62,416 - H281DRAFT_03959 0.15 +0.4 62,552 - H281DRAFT_03959 0.25 -0.8 62,587 + H281DRAFT_03959 0.28 -0.7 62,588 - H281DRAFT_03959 0.28 -0.8 62,664 + H281DRAFT_03959 0.33 +0.3 62,993 + H281DRAFT_03959 0.57 +0.8 62,993 + H281DRAFT_03959 0.57 +1.0 62,993 + H281DRAFT_03959 0.57 -0.1 62,993 + H281DRAFT_03959 0.57 +1.0 62,994 - H281DRAFT_03959 0.57 +0.7 62,994 - H281DRAFT_03959 0.57 +0.7 62,994 - H281DRAFT_03959 0.57 -0.9 63,149 + H281DRAFT_03959 0.68 +0.2 63,149 + H281DRAFT_03959 0.68 -0.7 63,150 - H281DRAFT_03959 0.69 +0.4 63,192 - H281DRAFT_03959 0.72 -0.5 63,192 - H281DRAFT_03959 0.72 -0.2 63,192 - H281DRAFT_03959 0.72 -0.5 63,637 + +0.4 63,687 + +1.0 63,688 - +0.3 64,233 + -1.0 64,251 + +0.2 64,251 + -1.0 64,306 + -0.3 64,307 - +0.5
Or see this region's nucleotide sequence