Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03197 and H281DRAFT_03198 are separated by 169 nucleotides H281DRAFT_03198 and H281DRAFT_03199 are separated by 13 nucleotides H281DRAFT_03199 and H281DRAFT_03200 are separated by 527 nucleotides
H281DRAFT_03197: H281DRAFT_03197 - manganese transport protein, at 246,120 to 247,499
_03197
H281DRAFT_03198: H281DRAFT_03198 - flagellar transcriptional activator FlhC, at 247,669 to 248,238
_03198
H281DRAFT_03199: H281DRAFT_03199 - flagellar transcriptional activator FlhD, at 248,252 to 248,572
_03199
H281DRAFT_03200: H281DRAFT_03200 - hypothetical protein, at 249,100 to 250,428
_03200
Position (kb) 248
249 Strain fitness (log2 ratio) -1
0
1
2
3 at 247.599 kb on - strand at 248.000 kb on + strand, within H281DRAFT_03198 at 248.001 kb on - strand, within H281DRAFT_03198 at 248.009 kb on + strand, within H281DRAFT_03198 at 248.009 kb on + strand, within H281DRAFT_03198 at 248.009 kb on + strand, within H281DRAFT_03198 at 248.010 kb on - strand, within H281DRAFT_03198 at 248.010 kb on - strand, within H281DRAFT_03198 at 248.048 kb on + strand, within H281DRAFT_03198 at 248.049 kb on - strand, within H281DRAFT_03198 at 248.049 kb on - strand, within H281DRAFT_03198 at 248.250 kb on + strand at 248.251 kb on - strand at 248.253 kb on + strand at 248.500 kb on + strand, within H281DRAFT_03199 at 248.500 kb on + strand, within H281DRAFT_03199 at 248.500 kb on + strand, within H281DRAFT_03199 at 248.500 kb on + strand, within H281DRAFT_03199 at 248.500 kb on + strand, within H281DRAFT_03199 at 248.501 kb on - strand, within H281DRAFT_03199 at 248.501 kb on - strand, within H281DRAFT_03199 at 248.501 kb on - strand, within H281DRAFT_03199 at 248.520 kb on + strand, within H281DRAFT_03199 at 248.521 kb on - strand, within H281DRAFT_03199 at 248.564 kb on - strand at 248.598 kb on + strand at 248.599 kb on - strand at 248.599 kb on - strand at 248.599 kb on - strand at 248.601 kb on + strand at 248.601 kb on + strand at 248.601 kb on + strand at 248.601 kb on + strand at 248.601 kb on + strand at 248.602 kb on - strand at 248.602 kb on - strand at 248.602 kb on - strand at 248.602 kb on - strand at 248.620 kb on + strand at 248.620 kb on + strand at 248.621 kb on - strand at 248.621 kb on - strand at 248.621 kb on - strand at 248.629 kb on + strand at 248.660 kb on - strand at 248.675 kb on + strand at 248.676 kb on - strand at 248.676 kb on - strand at 248.788 kb on + strand at 248.822 kb on + strand at 248.822 kb on + strand at 249.064 kb on - strand at 249.236 kb on + strand, within H281DRAFT_03200 at 249.249 kb on + strand, within H281DRAFT_03200 at 249.249 kb on + strand at 249.249 kb on + strand, within H281DRAFT_03200 at 249.250 kb on - strand, within H281DRAFT_03200 at 249.258 kb on - strand, within H281DRAFT_03200 at 249.464 kb on + strand, within H281DRAFT_03200
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 247,599 - +1.6 248,000 + H281DRAFT_03198 0.58 +1.5 248,001 - H281DRAFT_03198 0.58 +0.3 248,009 + H281DRAFT_03198 0.60 +0.7 248,009 + H281DRAFT_03198 0.60 -1.1 248,009 + H281DRAFT_03198 0.60 +2.0 248,010 - H281DRAFT_03198 0.60 +3.2 248,010 - H281DRAFT_03198 0.60 -0.2 248,048 + H281DRAFT_03198 0.66 +1.3 248,049 - H281DRAFT_03198 0.67 +0.2 248,049 - H281DRAFT_03198 0.67 +0.3 248,250 + +0.4 248,251 - +0.8 248,253 + +0.3 248,500 + H281DRAFT_03199 0.77 +1.0 248,500 + H281DRAFT_03199 0.77 +1.3 248,500 + H281DRAFT_03199 0.77 +0.3 248,500 + H281DRAFT_03199 0.77 +0.2 248,500 + H281DRAFT_03199 0.77 -0.2 248,501 - H281DRAFT_03199 0.78 +0.8 248,501 - H281DRAFT_03199 0.78 +0.6 248,501 - H281DRAFT_03199 0.78 +1.8 248,520 + H281DRAFT_03199 0.83 +1.0 248,521 - H281DRAFT_03199 0.84 +1.5 248,564 - +0.4 248,598 + -0.3 248,599 - -0.2 248,599 - +0.9 248,599 - +0.2 248,601 + +0.7 248,601 + +2.2 248,601 + +0.5 248,601 + +0.5 248,601 + +0.5 248,602 - +0.8 248,602 - -0.3 248,602 - +0.3 248,602 - +0.3 248,620 + +3.0 248,620 + +1.0 248,621 - +0.6 248,621 - +0.5 248,621 - +0.8 248,629 + +1.0 248,660 - -0.0 248,675 + +1.4 248,676 - -0.4 248,676 - +0.9 248,788 + -0.7 248,822 + +1.2 248,822 + -0.4 249,064 - -1.4 249,236 + H281DRAFT_03200 0.10 +0.7 249,249 + H281DRAFT_03200 0.11 -0.4 249,249 + +1.8 249,249 + H281DRAFT_03200 0.11 +0.6 249,250 - H281DRAFT_03200 0.11 -0.5 249,258 - H281DRAFT_03200 0.12 +0.1 249,464 + H281DRAFT_03200 0.27 -0.6
Or see this region's nucleotide sequence