Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00974 and H281DRAFT_00975 are separated by 58 nucleotides H281DRAFT_00975 and H281DRAFT_00976 are separated by 112 nucleotides
H281DRAFT_00974: H281DRAFT_00974 - L-alanine-DL-glutamate epimerase, at 1,091,841 to 1,093,058
_00974
H281DRAFT_00975: H281DRAFT_00975 - choline dehydrogenase, at 1,093,117 to 1,094,778
_00975
H281DRAFT_00976: H281DRAFT_00976 - LysR family transcriptional regulator, glycine cleavage system transcriptional activator, at 1,094,891 to 1,095,826
_00976
Position (kb)
1093
1094
1095 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1092.228 kb on + strand, within H281DRAFT_00974 at 1092.229 kb on - strand, within H281DRAFT_00974 at 1092.229 kb on - strand, within H281DRAFT_00974 at 1092.229 kb on - strand, within H281DRAFT_00974 at 1092.265 kb on - strand, within H281DRAFT_00974 at 1092.352 kb on - strand, within H281DRAFT_00974 at 1092.745 kb on - strand, within H281DRAFT_00974 at 1092.772 kb on - strand, within H281DRAFT_00974 at 1093.075 kb on + strand at 1093.076 kb on - strand at 1093.113 kb on + strand at 1093.113 kb on + strand at 1093.114 kb on - strand at 1093.114 kb on - strand at 1093.130 kb on - strand at 1093.273 kb on + strand at 1093.300 kb on + strand, within H281DRAFT_00975 at 1093.300 kb on + strand, within H281DRAFT_00975 at 1093.300 kb on + strand, within H281DRAFT_00975 at 1093.303 kb on + strand, within H281DRAFT_00975 at 1093.342 kb on + strand, within H281DRAFT_00975 at 1093.714 kb on + strand, within H281DRAFT_00975 at 1094.015 kb on - strand, within H281DRAFT_00975 at 1094.090 kb on - strand, within H281DRAFT_00975 at 1094.188 kb on + strand, within H281DRAFT_00975 at 1094.188 kb on + strand, within H281DRAFT_00975 at 1094.530 kb on + strand, within H281DRAFT_00975 at 1094.749 kb on + strand at 1095.187 kb on + strand, within H281DRAFT_00976 at 1095.601 kb on + strand, within H281DRAFT_00976
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 1,092,228 + H281DRAFT_00974 0.32 -0.4 1,092,229 - H281DRAFT_00974 0.32 +0.9 1,092,229 - H281DRAFT_00974 0.32 +1.8 1,092,229 - H281DRAFT_00974 0.32 -2.2 1,092,265 - H281DRAFT_00974 0.35 -0.4 1,092,352 - H281DRAFT_00974 0.42 +1.0 1,092,745 - H281DRAFT_00974 0.74 -0.7 1,092,772 - H281DRAFT_00974 0.76 +1.6 1,093,075 + -0.2 1,093,076 - +1.0 1,093,113 + -0.2 1,093,113 + +0.7 1,093,114 - -0.1 1,093,114 - -0.2 1,093,130 - -1.6 1,093,273 + +0.6 1,093,300 + H281DRAFT_00975 0.11 -0.3 1,093,300 + H281DRAFT_00975 0.11 +0.5 1,093,300 + H281DRAFT_00975 0.11 +0.1 1,093,303 + H281DRAFT_00975 0.11 +0.6 1,093,342 + H281DRAFT_00975 0.14 +2.7 1,093,714 + H281DRAFT_00975 0.36 +1.4 1,094,015 - H281DRAFT_00975 0.54 +0.0 1,094,090 - H281DRAFT_00975 0.59 -0.9 1,094,188 + H281DRAFT_00975 0.64 +0.1 1,094,188 + H281DRAFT_00975 0.64 +0.4 1,094,530 + H281DRAFT_00975 0.85 -0.0 1,094,749 + -2.0 1,095,187 + H281DRAFT_00976 0.32 -1.2 1,095,601 + H281DRAFT_00976 0.76 +0.3
Or see this region's nucleotide sequence