Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00968 and H281DRAFT_00969 are separated by 208 nucleotides H281DRAFT_00969 and H281DRAFT_00970 are separated by 129 nucleotides H281DRAFT_00970 and H281DRAFT_00971 are separated by 12 nucleotides
H281DRAFT_00968: H281DRAFT_00968 - MFS transporter, NNP family, nitrate/nitrite transporter, at 1,084,630 to 1,085,997
_00968
H281DRAFT_00969: H281DRAFT_00969 - Type IV pili methyl-accepting chemotaxis transducer N-term, at 1,086,206 to 1,086,799
_00969
H281DRAFT_00970: H281DRAFT_00970 - putative Mg2+ transporter-C (MgtC) family protein, at 1,086,929 to 1,087,417
_00970
H281DRAFT_00971: H281DRAFT_00971 - Outer membrane protein (porin), at 1,087,430 to 1,088,599
_00971
Position (kb)
1086
1087
1088 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1086.115 kb on + strand at 1086.499 kb on - strand, within H281DRAFT_00969 at 1086.541 kb on - strand, within H281DRAFT_00969 at 1086.814 kb on + strand at 1086.927 kb on - strand at 1086.927 kb on - strand at 1087.003 kb on - strand, within H281DRAFT_00970 at 1087.038 kb on + strand, within H281DRAFT_00970 at 1087.039 kb on - strand, within H281DRAFT_00970 at 1087.569 kb on + strand, within H281DRAFT_00971 at 1087.569 kb on + strand, within H281DRAFT_00971 at 1087.570 kb on - strand, within H281DRAFT_00971 at 1087.570 kb on - strand, within H281DRAFT_00971 at 1087.657 kb on - strand, within H281DRAFT_00971 at 1087.816 kb on - strand, within H281DRAFT_00971 at 1088.019 kb on + strand, within H281DRAFT_00971 at 1088.019 kb on + strand, within H281DRAFT_00971 at 1088.103 kb on + strand, within H281DRAFT_00971 at 1088.246 kb on - strand, within H281DRAFT_00971 at 1088.280 kb on + strand, within H281DRAFT_00971 at 1088.280 kb on + strand, within H281DRAFT_00971
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 1,086,115 + -0.0 1,086,499 - H281DRAFT_00969 0.49 -1.2 1,086,541 - H281DRAFT_00969 0.56 -0.2 1,086,814 + -0.3 1,086,927 - +1.7 1,086,927 - +1.5 1,087,003 - H281DRAFT_00970 0.15 +0.7 1,087,038 + H281DRAFT_00970 0.22 +0.6 1,087,039 - H281DRAFT_00970 0.22 +0.6 1,087,569 + H281DRAFT_00971 0.12 +0.2 1,087,569 + H281DRAFT_00971 0.12 -0.8 1,087,570 - H281DRAFT_00971 0.12 +1.0 1,087,570 - H281DRAFT_00971 0.12 +0.7 1,087,657 - H281DRAFT_00971 0.19 +0.1 1,087,816 - H281DRAFT_00971 0.33 -0.3 1,088,019 + H281DRAFT_00971 0.50 +0.1 1,088,019 + H281DRAFT_00971 0.50 -1.3 1,088,103 + H281DRAFT_00971 0.58 +0.7 1,088,246 - H281DRAFT_00971 0.70 +0.2 1,088,280 + H281DRAFT_00971 0.73 +0.9 1,088,280 + H281DRAFT_00971 0.73 +3.0
Or see this region's nucleotide sequence