Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3323 and Dsui_3324 are separated by 92 nucleotides Dsui_3324 and Dsui_3325 are separated by 61 nucleotides Dsui_3325 and Dsui_3326 are separated by 23 nucleotides
Dsui_3323: Dsui_3323 - tRNA-guanine transglycosylase, queuosine-34-forming, at 3,562,961 to 3,564,085
_3323
Dsui_3324: Dsui_3324 - preprotein translocase, YajC subunit, at 3,564,178 to 3,564,507
_3324
Dsui_3325: Dsui_3325 - protein-export membrane protein, SecD/SecF family, at 3,564,569 to 3,566,437
_3325
Dsui_3326: Dsui_3326 - protein-export membrane protein, SecD/SecF family, at 3,566,461 to 3,567,408
_3326
Position (kb)
3564
3565
3566
3567 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3563.633 kb on + strand, within Dsui_3323 at 3563.788 kb on + strand at 3563.789 kb on + strand, within Dsui_3323 at 3563.904 kb on - strand, within Dsui_3323 at 3563.905 kb on + strand, within Dsui_3323 at 3563.970 kb on + strand, within Dsui_3323 at 3563.970 kb on + strand, within Dsui_3323 at 3564.080 kb on + strand at 3564.080 kb on + strand at 3564.274 kb on + strand, within Dsui_3324 at 3564.475 kb on + strand at 3566.399 kb on + strand at 3566.417 kb on + strand at 3566.417 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 3,563,633 + Dsui_3323 0.60 -1.1 3,563,788 + -0.5 3,563,789 + Dsui_3323 0.74 -0.6 3,563,904 - Dsui_3323 0.84 -0.5 3,563,905 + Dsui_3323 0.84 -0.0 3,563,970 + Dsui_3323 0.90 -3.1 3,563,970 + Dsui_3323 0.90 -0.3 3,564,080 + +1.0 3,564,080 + +1.0 3,564,274 + Dsui_3324 0.29 -2.9 3,564,475 + -1.9 3,566,399 + +0.1 3,566,417 + +0.8 3,566,417 + -0.6
Or see this region's nucleotide sequence