Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2696 and Dsui_2697 are separated by 57 nucleotides Dsui_2697 and Dsui_2698 are separated by 2 nucleotides Dsui_2698 and Dsui_2699 are separated by 51 nucleotides
Dsui_2696: Dsui_2696 - (protein-PII) uridylyltransferase, at 2,847,694 to 2,850,285
_2696
Dsui_2697: Dsui_2697 - peptide deformylase, at 2,850,343 to 2,850,891
_2697
Dsui_2698: Dsui_2698 - purine nucleoside phosphorylase, at 2,850,894 to 2,851,646
_2698
Dsui_2699: Dsui_2699 - hypoxanthine-guanine phosphoribosyltransferase, at 2,851,698 to 2,852,246
_2699
Position (kb)
2850
2851 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2849.376 kb on - strand, within Dsui_2696 at 2849.420 kb on + strand, within Dsui_2696 at 2849.428 kb on - strand, within Dsui_2696 at 2849.428 kb on - strand at 2849.463 kb on + strand, within Dsui_2696 at 2849.498 kb on - strand, within Dsui_2696 at 2849.584 kb on + strand, within Dsui_2696 at 2849.695 kb on + strand, within Dsui_2696 at 2849.772 kb on - strand, within Dsui_2696 at 2849.855 kb on - strand, within Dsui_2696 at 2849.890 kb on - strand, within Dsui_2696 at 2849.890 kb on - strand, within Dsui_2696 at 2849.952 kb on + strand, within Dsui_2696 at 2850.050 kb on - strand at 2850.124 kb on + strand at 2850.124 kb on + strand at 2850.221 kb on + strand at 2850.221 kb on + strand at 2850.281 kb on - strand at 2850.293 kb on - strand at 2850.299 kb on - strand at 2850.462 kb on + strand, within Dsui_2697 at 2850.470 kb on - strand, within Dsui_2697 at 2850.490 kb on - strand, within Dsui_2697 at 2850.584 kb on - strand, within Dsui_2697 at 2850.619 kb on + strand at 2850.674 kb on - strand, within Dsui_2697 at 2850.722 kb on - strand, within Dsui_2697 at 2850.821 kb on - strand, within Dsui_2697 at 2851.056 kb on - strand, within Dsui_2698 at 2851.114 kb on + strand, within Dsui_2698 at 2851.114 kb on + strand at 2851.132 kb on + strand, within Dsui_2698 at 2851.163 kb on + strand, within Dsui_2698 at 2851.182 kb on + strand, within Dsui_2698 at 2851.263 kb on + strand at 2851.517 kb on - strand, within Dsui_2698 at 2851.547 kb on + strand, within Dsui_2698 at 2851.614 kb on + strand at 2851.621 kb on - strand at 2851.622 kb on - strand at 2851.864 kb on + strand at 2851.864 kb on + strand, within Dsui_2699
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 2,849,376 - Dsui_2696 0.65 -0.1 2,849,420 + Dsui_2696 0.67 +0.0 2,849,428 - Dsui_2696 0.67 -0.7 2,849,428 - -0.6 2,849,463 + Dsui_2696 0.68 +1.3 2,849,498 - Dsui_2696 0.70 -1.1 2,849,584 + Dsui_2696 0.73 -0.1 2,849,695 + Dsui_2696 0.77 +0.1 2,849,772 - Dsui_2696 0.80 -2.0 2,849,855 - Dsui_2696 0.83 -2.5 2,849,890 - Dsui_2696 0.85 -0.9 2,849,890 - Dsui_2696 0.85 -0.6 2,849,952 + Dsui_2696 0.87 -1.1 2,850,050 - -1.2 2,850,124 + -0.5 2,850,124 + -1.2 2,850,221 + -0.4 2,850,221 + -0.2 2,850,281 - +1.4 2,850,293 - +1.4 2,850,299 - -0.2 2,850,462 + Dsui_2697 0.22 -0.0 2,850,470 - Dsui_2697 0.23 +0.4 2,850,490 - Dsui_2697 0.27 +1.5 2,850,584 - Dsui_2697 0.44 -2.2 2,850,619 + -1.6 2,850,674 - Dsui_2697 0.60 +2.1 2,850,722 - Dsui_2697 0.69 +1.6 2,850,821 - Dsui_2697 0.87 +0.8 2,851,056 - Dsui_2698 0.22 -1.2 2,851,114 + Dsui_2698 0.29 -3.4 2,851,114 + -1.7 2,851,132 + Dsui_2698 0.32 -2.2 2,851,163 + Dsui_2698 0.36 -2.8 2,851,182 + Dsui_2698 0.38 -2.5 2,851,263 + -2.9 2,851,517 - Dsui_2698 0.83 -0.9 2,851,547 + Dsui_2698 0.87 -1.2 2,851,614 + -2.3 2,851,621 - -1.0 2,851,622 - -0.8 2,851,864 + -0.4 2,851,864 + Dsui_2699 0.30 -2.2
Or see this region's nucleotide sequence