Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1620 and Dsui_1621 are separated by 146 nucleotides Dsui_1621 and Dsui_1622 are separated by 10 nucleotides Dsui_1622 and Dsui_1623 are separated by 220 nucleotides Dsui_1623 and Dsui_1624 are separated by 152 nucleotides
Dsui_1620: Dsui_1620 - PAP2 (acid phosphatase) superfamily protein, at 1,702,647 to 1,703,414
_1620
Dsui_1621: Dsui_1621 - diacylglycerol kinase, at 1,703,561 to 1,703,932
_1621
Dsui_1622: Dsui_1622 - excinuclease ABC, A subunit, at 1,703,943 to 1,706,762
_1622
Dsui_1623: Dsui_1623 - tRNA-Thr, at 1,706,983 to 1,707,058
_1623
Dsui_1624: Dsui_1624 - dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein, at 1,707,211 to 1,707,978
_1624
Position (kb)
1703
1704
1705
1706
1707 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1703.128 kb on - strand, within Dsui_1620 at 1703.177 kb on + strand, within Dsui_1620 at 1703.220 kb on + strand, within Dsui_1620 at 1703.226 kb on + strand, within Dsui_1620 at 1703.338 kb on + strand at 1703.362 kb on + strand at 1703.416 kb on - strand at 1703.634 kb on + strand, within Dsui_1621 at 1703.661 kb on - strand, within Dsui_1621 at 1703.851 kb on + strand at 1703.957 kb on - strand at 1703.992 kb on + strand at 1704.092 kb on + strand at 1704.092 kb on + strand at 1704.116 kb on + strand at 1704.121 kb on + strand at 1704.193 kb on - strand at 1704.242 kb on + strand, within Dsui_1622 at 1704.242 kb on + strand, within Dsui_1622 at 1704.299 kb on + strand, within Dsui_1622 at 1704.299 kb on + strand, within Dsui_1622 at 1704.313 kb on - strand, within Dsui_1622 at 1704.389 kb on + strand, within Dsui_1622 at 1704.392 kb on - strand, within Dsui_1622 at 1704.464 kb on - strand, within Dsui_1622 at 1704.651 kb on - strand, within Dsui_1622 at 1704.651 kb on - strand, within Dsui_1622 at 1704.656 kb on - strand, within Dsui_1622 at 1704.705 kb on - strand, within Dsui_1622 at 1704.717 kb on - strand, within Dsui_1622 at 1704.802 kb on + strand, within Dsui_1622 at 1704.802 kb on + strand at 1704.832 kb on - strand, within Dsui_1622 at 1704.993 kb on - strand, within Dsui_1622 at 1705.047 kb on - strand, within Dsui_1622 at 1705.073 kb on - strand, within Dsui_1622 at 1705.180 kb on + strand, within Dsui_1622 at 1705.254 kb on - strand, within Dsui_1622 at 1705.269 kb on - strand, within Dsui_1622 at 1705.341 kb on + strand, within Dsui_1622 at 1705.443 kb on - strand, within Dsui_1622 at 1705.575 kb on + strand, within Dsui_1622 at 1705.600 kb on - strand, within Dsui_1622 at 1705.728 kb on - strand, within Dsui_1622 at 1705.728 kb on - strand, within Dsui_1622 at 1705.842 kb on + strand at 1705.869 kb on - strand, within Dsui_1622 at 1705.916 kb on + strand, within Dsui_1622 at 1705.916 kb on + strand, within Dsui_1622 at 1705.932 kb on - strand, within Dsui_1622 at 1705.944 kb on - strand, within Dsui_1622 at 1706.002 kb on - strand, within Dsui_1622 at 1706.146 kb on - strand, within Dsui_1622 at 1706.148 kb on + strand, within Dsui_1622 at 1706.156 kb on - strand, within Dsui_1622 at 1706.167 kb on - strand, within Dsui_1622 at 1706.187 kb on - strand, within Dsui_1622 at 1706.255 kb on + strand, within Dsui_1622 at 1706.421 kb on - strand, within Dsui_1622 at 1706.473 kb on + strand, within Dsui_1622 at 1706.702 kb on + strand at 1706.731 kb on - strand at 1706.731 kb on - strand at 1706.731 kb on - strand at 1706.776 kb on - strand at 1706.776 kb on - strand at 1706.788 kb on - strand at 1706.809 kb on + strand at 1706.953 kb on + strand at 1707.077 kb on + strand at 1707.080 kb on + strand at 1707.088 kb on - strand at 1707.199 kb on + strand at 1707.207 kb on - strand at 1707.217 kb on + strand at 1707.321 kb on + strand, within Dsui_1624 at 1707.388 kb on - strand at 1707.394 kb on + strand, within Dsui_1624 at 1707.407 kb on - strand, within Dsui_1624 at 1707.498 kb on + strand, within Dsui_1624 at 1707.501 kb on - strand at 1707.530 kb on + strand, within Dsui_1624 at 1707.571 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 1,703,128 - Dsui_1620 0.63 -1.0 1,703,177 + Dsui_1620 0.69 -0.6 1,703,220 + Dsui_1620 0.75 -1.3 1,703,226 + Dsui_1620 0.75 +0.4 1,703,338 + +0.6 1,703,362 + -0.4 1,703,416 - +0.9 1,703,634 + Dsui_1621 0.20 +0.3 1,703,661 - Dsui_1621 0.27 +0.4 1,703,851 + -1.6 1,703,957 - -0.2 1,703,992 + -0.4 1,704,092 + -1.9 1,704,092 + +1.1 1,704,116 + -0.7 1,704,121 + -0.7 1,704,193 - +0.6 1,704,242 + Dsui_1622 0.11 -0.3 1,704,242 + Dsui_1622 0.11 -1.9 1,704,299 + Dsui_1622 0.13 -2.9 1,704,299 + Dsui_1622 0.13 +0.7 1,704,313 - Dsui_1622 0.13 +0.5 1,704,389 + Dsui_1622 0.16 -1.2 1,704,392 - Dsui_1622 0.16 -0.5 1,704,464 - Dsui_1622 0.18 +0.5 1,704,651 - Dsui_1622 0.25 +0.4 1,704,651 - Dsui_1622 0.25 -0.8 1,704,656 - Dsui_1622 0.25 -0.8 1,704,705 - Dsui_1622 0.27 +0.9 1,704,717 - Dsui_1622 0.27 +0.2 1,704,802 + Dsui_1622 0.30 -0.7 1,704,802 + -2.7 1,704,832 - Dsui_1622 0.32 -0.1 1,704,993 - Dsui_1622 0.37 -1.4 1,705,047 - Dsui_1622 0.39 +0.2 1,705,073 - Dsui_1622 0.40 -0.2 1,705,180 + Dsui_1622 0.44 -1.4 1,705,254 - Dsui_1622 0.46 -1.7 1,705,269 - Dsui_1622 0.47 +0.3 1,705,341 + Dsui_1622 0.50 -0.9 1,705,443 - Dsui_1622 0.53 -2.1 1,705,575 + Dsui_1622 0.58 -1.7 1,705,600 - Dsui_1622 0.59 +1.1 1,705,728 - Dsui_1622 0.63 +1.4 1,705,728 - Dsui_1622 0.63 +0.5 1,705,842 + -3.0 1,705,869 - Dsui_1622 0.68 +2.0 1,705,916 + Dsui_1622 0.70 -0.9 1,705,916 + Dsui_1622 0.70 -0.0 1,705,932 - Dsui_1622 0.71 +0.9 1,705,944 - Dsui_1622 0.71 +2.8 1,706,002 - Dsui_1622 0.73 +0.7 1,706,146 - Dsui_1622 0.78 -0.7 1,706,148 + Dsui_1622 0.78 -0.6 1,706,156 - Dsui_1622 0.78 -0.5 1,706,167 - Dsui_1622 0.79 -0.2 1,706,187 - Dsui_1622 0.80 +0.3 1,706,255 + Dsui_1622 0.82 -0.3 1,706,421 - Dsui_1622 0.88 +0.2 1,706,473 + Dsui_1622 0.90 -0.8 1,706,702 + -1.2 1,706,731 - -0.4 1,706,731 - -0.7 1,706,731 - -1.2 1,706,776 - +0.4 1,706,776 - +1.5 1,706,788 - +0.3 1,706,809 + +0.3 1,706,953 + +1.0 1,707,077 + -0.0 1,707,080 + -0.5 1,707,088 - +2.4 1,707,199 + +2.4 1,707,207 - -2.6 1,707,217 + +2.1 1,707,321 + Dsui_1624 0.14 +1.2 1,707,388 - -0.4 1,707,394 + Dsui_1624 0.24 +1.6 1,707,407 - Dsui_1624 0.26 -0.8 1,707,498 + Dsui_1624 0.37 -0.2 1,707,501 - +1.1 1,707,530 + Dsui_1624 0.42 +0.4 1,707,571 - -2.3
Or see this region's nucleotide sequence