Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0095 and Dsui_0096 are separated by 267 nucleotides Dsui_0096 and Dsui_0097 are separated by 119 nucleotides Dsui_0097 and Dsui_0098 are separated by 88 nucleotides Dsui_0098 and Dsui_0099 are separated by 3 nucleotides
Dsui_0095: Dsui_0095 - indolepyruvate ferredoxin oxidreductase, alpha/beta subunit, at 93,240 to 95,105
_0095
Dsui_0096: Dsui_0096 - methyl-accepting chemotaxis protein, at 95,373 to 97,190
_0096
Dsui_0097: Dsui_0097 - putative metal-binding protein, at 97,310 to 97,750
_0097
Dsui_0098: Dsui_0098 - Uncharacterized protein family UPF0057, at 97,839 to 98,033
_0098
Dsui_0099: Dsui_0099 - putative periplasmic or secreted lipoprotein, at 98,037 to 98,696
_0099
Position (kb)
95
96
97
98 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 94.577 kb on - strand, within Dsui_0095 at 94.618 kb on - strand, within Dsui_0095 at 94.640 kb on + strand, within Dsui_0095 at 94.648 kb on - strand, within Dsui_0095 at 94.648 kb on - strand, within Dsui_0095 at 94.670 kb on - strand, within Dsui_0095 at 94.680 kb on - strand, within Dsui_0095 at 94.753 kb on - strand, within Dsui_0095 at 94.757 kb on + strand at 94.816 kb on - strand, within Dsui_0095 at 94.939 kb on + strand at 94.939 kb on + strand at 94.939 kb on + strand at 94.939 kb on + strand at 94.939 kb on + strand at 94.939 kb on + strand at 94.939 kb on + strand at 94.939 kb on + strand at 94.946 kb on + strand at 94.946 kb on + strand at 94.946 kb on + strand at 94.947 kb on - strand at 94.947 kb on - strand at 94.947 kb on - strand at 94.947 kb on - strand at 94.947 kb on - strand at 94.947 kb on - strand at 94.947 kb on - strand at 94.947 kb on - strand at 94.954 kb on - strand at 94.954 kb on - strand at 94.954 kb on - strand at 94.954 kb on - strand at 94.954 kb on - strand at 94.954 kb on - strand at 95.014 kb on - strand at 95.020 kb on - strand at 95.073 kb on + strand at 95.073 kb on + strand at 95.073 kb on + strand at 95.078 kb on + strand at 95.081 kb on - strand at 95.081 kb on - strand at 95.081 kb on - strand at 95.153 kb on - strand at 95.198 kb on + strand at 95.200 kb on + strand at 95.219 kb on - strand at 95.255 kb on - strand at 95.289 kb on - strand at 95.353 kb on + strand at 95.357 kb on + strand at 95.383 kb on - strand at 95.390 kb on + strand at 95.456 kb on - strand at 95.485 kb on + strand at 95.490 kb on + strand at 95.498 kb on - strand at 95.500 kb on - strand at 95.522 kb on + strand at 95.530 kb on - strand at 95.571 kb on - strand, within Dsui_0096 at 95.571 kb on - strand, within Dsui_0096 at 95.571 kb on - strand at 95.571 kb on - strand, within Dsui_0096 at 95.571 kb on - strand, within Dsui_0096 at 95.592 kb on + strand, within Dsui_0096 at 95.609 kb on + strand, within Dsui_0096 at 95.623 kb on + strand, within Dsui_0096 at 95.623 kb on + strand, within Dsui_0096 at 95.623 kb on + strand, within Dsui_0096 at 95.623 kb on + strand, within Dsui_0096 at 95.655 kb on + strand, within Dsui_0096 at 95.685 kb on - strand, within Dsui_0096 at 95.707 kb on - strand, within Dsui_0096 at 95.713 kb on + strand, within Dsui_0096 at 95.741 kb on + strand, within Dsui_0096 at 95.754 kb on - strand, within Dsui_0096 at 95.762 kb on - strand, within Dsui_0096 at 96.034 kb on + strand, within Dsui_0096 at 96.054 kb on + strand, within Dsui_0096 at 96.074 kb on - strand at 96.086 kb on + strand, within Dsui_0096 at 96.094 kb on - strand at 96.129 kb on + strand, within Dsui_0096 at 96.149 kb on + strand, within Dsui_0096 at 96.346 kb on - strand, within Dsui_0096 at 96.389 kb on + strand, within Dsui_0096 at 96.402 kb on - strand, within Dsui_0096 at 96.443 kb on + strand, within Dsui_0096 at 96.613 kb on + strand, within Dsui_0096 at 96.613 kb on + strand, within Dsui_0096 at 96.613 kb on + strand, within Dsui_0096 at 96.621 kb on - strand, within Dsui_0096 at 96.621 kb on - strand at 96.621 kb on - strand, within Dsui_0096 at 96.701 kb on - strand, within Dsui_0096 at 96.745 kb on + strand, within Dsui_0096 at 96.814 kb on + strand, within Dsui_0096 at 96.826 kb on + strand, within Dsui_0096 at 96.838 kb on + strand, within Dsui_0096 at 96.838 kb on + strand, within Dsui_0096 at 96.843 kb on + strand, within Dsui_0096 at 96.846 kb on - strand, within Dsui_0096 at 96.846 kb on - strand, within Dsui_0096 at 96.951 kb on - strand, within Dsui_0096 at 97.029 kb on + strand at 97.032 kb on - strand at 97.057 kb on - strand at 97.057 kb on - strand at 97.072 kb on + strand at 97.249 kb on + strand at 97.381 kb on - strand, within Dsui_0097 at 97.442 kb on - strand at 97.444 kb on + strand, within Dsui_0097 at 97.473 kb on + strand, within Dsui_0097 at 97.473 kb on + strand, within Dsui_0097 at 97.478 kb on + strand, within Dsui_0097 at 97.535 kb on - strand, within Dsui_0097 at 97.535 kb on - strand, within Dsui_0097 at 97.535 kb on - strand, within Dsui_0097 at 97.540 kb on - strand, within Dsui_0097 at 97.576 kb on - strand, within Dsui_0097 at 97.618 kb on + strand, within Dsui_0097 at 97.626 kb on - strand, within Dsui_0097 at 97.687 kb on - strand at 97.709 kb on - strand at 97.739 kb on + strand at 97.744 kb on + strand at 97.744 kb on + strand at 97.744 kb on + strand at 97.744 kb on + strand at 97.752 kb on - strand at 98.004 kb on + strand, within Dsui_0098 at 98.066 kb on + strand at 98.066 kb on + strand at 98.098 kb on + strand at 98.106 kb on - strand, within Dsui_0099 at 98.158 kb on - strand, within Dsui_0099
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 94,577 - Dsui_0095 0.72 +1.5 94,618 - Dsui_0095 0.74 +1.0 94,640 + Dsui_0095 0.75 -0.7 94,648 - Dsui_0095 0.75 +0.8 94,648 - Dsui_0095 0.75 +0.6 94,670 - Dsui_0095 0.77 +0.9 94,680 - Dsui_0095 0.77 +1.7 94,753 - Dsui_0095 0.81 +0.0 94,757 + +0.1 94,816 - Dsui_0095 0.84 +1.1 94,939 + +0.9 94,939 + +1.2 94,939 + +1.3 94,939 + +0.9 94,939 + +0.9 94,939 + +1.1 94,939 + -0.2 94,939 + +0.7 94,946 + +0.2 94,946 + +0.5 94,946 + +0.9 94,947 - +0.4 94,947 - +0.4 94,947 - +0.4 94,947 - -0.9 94,947 - +0.9 94,947 - +0.0 94,947 - +0.9 94,947 - +0.3 94,954 - +0.9 94,954 - +0.7 94,954 - +0.3 94,954 - +0.6 94,954 - -0.7 94,954 - +1.9 95,014 - +1.5 95,020 - +0.2 95,073 + +0.1 95,073 + +0.6 95,073 + -1.7 95,078 + +1.4 95,081 - +0.4 95,081 - +0.4 95,081 - -2.9 95,153 - -0.1 95,198 + +0.8 95,200 + +1.3 95,219 - -1.2 95,255 - +0.5 95,289 - +0.3 95,353 + +0.5 95,357 + +0.6 95,383 - +0.4 95,390 + +1.1 95,456 - -1.9 95,485 + +0.9 95,490 + +1.4 95,498 - -1.2 95,500 - +0.4 95,522 + +1.3 95,530 - +0.2 95,571 - Dsui_0096 0.11 +0.8 95,571 - Dsui_0096 0.11 -1.3 95,571 - -1.9 95,571 - Dsui_0096 0.11 -0.1 95,571 - Dsui_0096 0.11 +0.1 95,592 + Dsui_0096 0.12 +1.2 95,609 + Dsui_0096 0.13 +0.4 95,623 + Dsui_0096 0.14 +0.5 95,623 + Dsui_0096 0.14 +0.3 95,623 + Dsui_0096 0.14 +1.1 95,623 + Dsui_0096 0.14 +1.5 95,655 + Dsui_0096 0.16 +0.6 95,685 - Dsui_0096 0.17 +0.8 95,707 - Dsui_0096 0.18 +0.9 95,713 + Dsui_0096 0.19 +1.6 95,741 + Dsui_0096 0.20 +1.9 95,754 - Dsui_0096 0.21 +1.1 95,762 - Dsui_0096 0.21 +0.5 96,034 + Dsui_0096 0.36 +2.3 96,054 + Dsui_0096 0.37 +1.0 96,074 - -0.9 96,086 + Dsui_0096 0.39 +1.0 96,094 - +0.2 96,129 + Dsui_0096 0.42 +0.8 96,149 + Dsui_0096 0.43 +2.3 96,346 - Dsui_0096 0.54 -0.4 96,389 + Dsui_0096 0.56 +1.0 96,402 - Dsui_0096 0.57 +0.1 96,443 + Dsui_0096 0.59 +1.4 96,613 + Dsui_0096 0.68 +1.4 96,613 + Dsui_0096 0.68 +1.2 96,613 + Dsui_0096 0.68 -1.0 96,621 - Dsui_0096 0.69 +0.9 96,621 - +0.7 96,621 - Dsui_0096 0.69 +0.6 96,701 - Dsui_0096 0.73 +1.0 96,745 + Dsui_0096 0.75 +1.6 96,814 + Dsui_0096 0.79 -0.7 96,826 + Dsui_0096 0.80 +1.5 96,838 + Dsui_0096 0.81 +0.7 96,838 + Dsui_0096 0.81 +0.1 96,843 + Dsui_0096 0.81 +1.2 96,846 - Dsui_0096 0.81 -2.9 96,846 - Dsui_0096 0.81 +0.1 96,951 - Dsui_0096 0.87 -1.3 97,029 + +1.4 97,032 - +0.7 97,057 - +1.3 97,057 - +0.7 97,072 + +1.3 97,249 + +1.2 97,381 - Dsui_0097 0.16 +0.5 97,442 - -1.9 97,444 + Dsui_0097 0.30 +1.4 97,473 + Dsui_0097 0.37 +0.8 97,473 + Dsui_0097 0.37 +0.3 97,478 + Dsui_0097 0.38 +1.0 97,535 - Dsui_0097 0.51 +0.5 97,535 - Dsui_0097 0.51 +0.8 97,535 - Dsui_0097 0.51 +0.3 97,540 - Dsui_0097 0.52 +0.4 97,576 - Dsui_0097 0.60 +1.8 97,618 + Dsui_0097 0.70 -0.2 97,626 - Dsui_0097 0.72 +0.5 97,687 - -1.1 97,709 - +0.7 97,739 + +1.5 97,744 + +1.3 97,744 + +0.6 97,744 + +1.3 97,744 + +2.0 97,752 - +0.5 98,004 + Dsui_0098 0.85 +2.2 98,066 + -0.6 98,066 + +0.3 98,098 + -0.8 98,106 - Dsui_0099 0.10 +0.6 98,158 - Dsui_0099 0.18 -1.2
Or see this region's nucleotide sequence