Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18925 and BWI76_RS18930 overlap by 4 nucleotides BWI76_RS18930 and BWI76_RS18935 overlap by 4 nucleotides
BWI76_RS18925: BWI76_RS18925 - histidinol dehydrogenase, at 3,925,538 to 3,926,842
_RS18925
BWI76_RS18930: BWI76_RS18930 - histidinol-phosphate transaminase, at 3,926,839 to 3,927,900
_RS18930
BWI76_RS18935: BWI76_RS18935 - bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase, at 3,927,897 to 3,928,964
_RS18935
Position (kb)
3926
3927
3928 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 3925.961 kb on + strand at 3925.969 kb on - strand, within BWI76_RS18925 at 3926.059 kb on + strand, within BWI76_RS18925 at 3926.096 kb on + strand, within BWI76_RS18925 at 3926.508 kb on + strand, within BWI76_RS18925 at 3926.719 kb on - strand at 3926.802 kb on + strand at 3926.851 kb on + strand at 3926.960 kb on + strand, within BWI76_RS18930 at 3927.342 kb on + strand, within BWI76_RS18930 at 3927.645 kb on - strand, within BWI76_RS18930 at 3927.841 kb on + strand at 3928.350 kb on + strand, within BWI76_RS18935 at 3928.358 kb on - strand, within BWI76_RS18935 at 3928.547 kb on + strand, within BWI76_RS18935 at 3928.788 kb on + strand, within BWI76_RS18935 at 3928.813 kb on + strand, within BWI76_RS18935 at 3928.820 kb on - strand, within BWI76_RS18935 at 3928.839 kb on - strand, within BWI76_RS18935
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,925,961 + -1.5 3,925,969 - BWI76_RS18925 0.33 -7.2 3,926,059 + BWI76_RS18925 0.40 -4.7 3,926,096 + BWI76_RS18925 0.43 -0.8 3,926,508 + BWI76_RS18925 0.74 -4.4 3,926,719 - -3.6 3,926,802 + -5.7 3,926,851 + -4.4 3,926,960 + BWI76_RS18930 0.11 -3.9 3,927,342 + BWI76_RS18930 0.47 -5.1 3,927,645 - BWI76_RS18930 0.76 -6.7 3,927,841 + -6.6 3,928,350 + BWI76_RS18935 0.42 -4.2 3,928,358 - BWI76_RS18935 0.43 -4.5 3,928,547 + BWI76_RS18935 0.61 -1.8 3,928,788 + BWI76_RS18935 0.83 -5.1 3,928,813 + BWI76_RS18935 0.86 -4.2 3,928,820 - BWI76_RS18935 0.86 -3.0 3,928,839 - BWI76_RS18935 0.88 -4.5
Or see this region's nucleotide sequence