Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_23620

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
5,170,061	+				-1.7
5,170,061	+				+0.6
5,170,061	+				-2.8
5,170,062	-				-1.0
5,170,062	-				-0.4
5,170,201	+		AO353_23615	0.18	-3.4
5,170,420	+		AO353_23615	0.43	-1.0
5,170,420	+		AO353_23615	0.43	-2.2
5,170,421	-		AO353_23615	0.43	-1.5
5,170,621	+		AO353_23615	0.66	-2.7
5,170,622	-		AO353_23615	0.66	-0.4
5,170,622	-				-0.4
5,170,630	+		AO353_23615	0.67	-0.1
5,170,631	-		AO353_23615	0.67	+0.6
5,170,633	+		AO353_23615	0.67	-2.7
5,170,636	+		AO353_23615	0.68	-0.4
5,170,706	-		AO353_23615	0.76	-0.7
5,170,785	+		AO353_23615	0.85	-0.5
5,170,785	+		AO353_23615	0.85	-1.2
5,170,785	+		AO353_23615	0.85	+0.6
5,170,785	+		AO353_23615	0.85	+0.6
5,170,785	+		AO353_23615	0.85	-2.4
5,170,786	-		AO353_23615	0.85	-0.4
5,170,786	-		AO353_23615	0.85	-0.2
5,170,786	-		AO353_23615	0.85	-1.4
5,170,786	-		AO353_23615	0.85	-2.4
5,170,786	-		AO353_23615	0.85	-0.7
5,170,786	-		AO353_23615	0.85	-1.4
5,170,786	-		AO353_23615	0.85	-0.1
5,170,888	+				-1.8
5,170,888	+				-0.1
5,170,889	-				+0.1
5,170,889	-				-0.9
5,170,889	-				-0.6
5,170,889	-				+1.8
5,170,889	-				+1.2
5,170,927	+				+0.4
5,171,007	+		AO353_23620	0.17	-2.4
5,171,008	-		AO353_23620	0.18	+2.4
5,171,008	-		AO353_23620	0.18	-1.7
5,171,181	-		AO353_23620	0.84	+0.4
5,171,181	-		AO353_23620	0.84	+2.8
5,171,192	+				+0.0
5,171,192	+		AO353_23620	0.88	+0.6
5,171,286	-				+0.6
5,171,286	-				-0.2
5,171,354	+		AO353_23625	0.16	-0.4
5,171,354	+		AO353_23625	0.16	-1.3
5,171,355	-		AO353_23625	0.16	-1.7
5,171,417	+		AO353_23625	0.24	-2.2
5,171,487	-		AO353_23625	0.32	+0.2
5,171,487	-		AO353_23625	0.32	-1.4
5,171,552	+		AO353_23625	0.40	+0.1
5,171,552	+		AO353_23625	0.40	+0.4
5,171,553	-		AO353_23625	0.40	-0.3
5,171,553	-		AO353_23625	0.40	-1.7
5,171,553	-		AO353_23625	0.40	+0.3
5,171,596	+		AO353_23625	0.45	+1.8
5,171,596	+		AO353_23625	0.45	-2.4
5,171,856	+		AO353_23625	0.77	+0.6
5,171,856	+		AO353_23625	0.77	-1.0
5,171,978	+				-0.4
5,171,978	+				-0.5
5,172,008	-				+1.6
5,172,008	-				+0.1
5,172,013	+				-1.4
5,172,013	+				+0.7
5,172,014	-				+0.0
5,172,014	-				+1.1
5,172,017	+				+0.3
5,172,017	+				-2.4
5,172,018	-				-0.2
5,172,018	-				-1.7
5,172,018	-				-0.1
5,172,026	+				+0.3
5,172,047	+				-0.2
5,172,047	+				-1.3
5,172,048	-				+0.1
5,172,048	-				+0.3
5,172,048	-				+1.4
5,172,089	+				+0.1
5,172,089	+				+0.0
5,172,090	-				+0.6
5,172,090	-				-1.0
5,172,090	-				+0.9
5,172,090	-				-0.7
5,172,090	-				+0.3
5,172,090	-				-0.7
5,172,102	-				-2.5
5,172,116	+				+0.1
5,172,117	-				+2.4