Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18335

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
4,039,962	-				-1.0
4,039,995	+				-1.6
4,039,995	+				-0.0
4,039,996	-				+0.3
4,040,075	+		AO353_18325	0.16	-0.0
4,040,075	+		AO353_18325	0.16	-0.6
4,040,225	+		AO353_18325	0.55	+0.7
4,040,226	-		AO353_18325	0.55	+0.4
4,040,226	-		AO353_18325	0.55	+0.6
4,040,229	+		AO353_18325	0.56	-1.0
4,040,417	-				+0.3
4,040,480	+				-0.8
4,040,481	-				+0.8
4,040,481	-				+1.6
4,040,481	-				-0.3
4,040,485	-				+1.3
4,040,513	-				-0.2
4,040,552	+				-0.0
4,040,552	+				-1.0
4,040,574	+				-0.2
4,040,574	+				-1.6
4,040,575	-				+0.8
4,040,578	+				+0.7
4,040,578	+				-0.6
4,040,578	+				-0.4
4,040,578	+				-0.4
4,040,578	+				+0.1
4,040,578	+				-0.8
4,040,578	+				-0.8
4,040,578	+				-0.2
4,040,578	+				+0.2
4,040,578	+				+1.1
4,040,578	+				-1.0
4,040,578	+				-0.0
4,040,578	+				-1.0
4,040,578	+				-1.0
4,040,579	-				-1.9
4,040,579	-				-1.3
4,040,579	-				-0.6
4,040,579	-				+0.0
4,040,638	+				-1.8
4,040,638	+				-1.0
4,040,638	+				-1.1
4,040,638	+				-1.6
4,040,638	+				-1.0
4,040,638	+				-1.3
4,040,639	-				+0.2
4,040,639	-				-1.6
4,040,639	-				+0.8
4,040,639	-				+0.4
4,040,639	-				+0.4
4,040,663	+				+1.0
4,040,663	+				-0.9
4,040,663	+				-1.7
4,040,663	+				+1.1
4,040,663	+				-0.5
4,040,663	+				-0.3
4,040,664	-				-0.2
4,040,664	-				+0.7
4,040,664	-				+1.6
4,040,680	+				+0.3
4,040,680	+				-1.6
4,040,680	+				-0.9
4,040,680	+				+2.2
4,040,680	+				+1.3
4,040,681	-				-0.0
4,040,681	-				-1.3
4,040,687	+				-0.6
4,040,687	+				+0.1
4,040,688	-				-0.6
4,040,688	-				+0.4
4,040,688	-				-1.0
4,040,805	-		AO353_18330	0.43	-2.7
4,041,009	-		AO353_18335	0.19	+1.7
4,041,121	-		AO353_18335	0.59	+1.3
4,041,121	-		AO353_18335	0.59	+0.8
4,041,180	+		AO353_18335	0.79	-2.5
4,041,180	+		AO353_18335	0.79	+0.5
4,041,180	+		AO353_18335	0.79	-1.0
4,041,181	-		AO353_18335	0.80	+3.3
4,041,268	+				-0.6
4,041,377	+				-0.9
4,041,377	+				-1.1
4,041,378	-				+1.1
4,041,421	+				-1.0
4,041,422	-				+0.7
4,041,422	-				+0.6
4,041,432	+				-0.8
4,041,440	+				+1.2
4,041,519	+				-0.2
4,041,520	-				+0.2
4,041,520	-				-0.8
4,041,520	-				-0.0
4,041,546	+				+0.7
4,041,546	+				+0.5
4,041,546	+				+0.3
4,041,546	+				+2.6
4,041,546	+				-0.0
4,041,546	+				+0.6
4,041,547	-				-1.3
4,041,547	-				-0.5
4,041,547	-				-1.0
4,041,586	-				+1.7
4,041,704	-				-0.0
4,041,704	-				-0.9
4,041,704	-				+0.2
4,041,850	+				-0.0
4,041,850	+				-0.2
4,041,850	+				+0.0
4,041,850	+				+0.1
4,041,850	+				+1.8
4,041,850	+				-0.6
4,041,886	+				+0.7
4,041,886	+				-0.0
4,041,886	+				-1.3
4,041,887	-				-1.7
4,041,887	-				-2.0
4,041,887	-				+0.9
4,041,933	-				+0.7
4,041,990	+		AO353_18340	0.13	+0.4
4,041,990	+		AO353_18340	0.13	-0.3
4,041,991	-		AO353_18340	0.13	+1.1
4,041,991	-		AO353_18340	0.13	-0.4
4,041,991	-		AO353_18340	0.13	+0.7
4,041,991	-		AO353_18340	0.13	-0.2
4,042,004	+		AO353_18340	0.15	+1.0
4,042,006	+		AO353_18340	0.15	-0.0
4,042,006	+		AO353_18340	0.15	+0.5
4,042,006	+		AO353_18340	0.15	-0.0
4,042,006	+		AO353_18340	0.15	-0.3
4,042,006	+		AO353_18340	0.15	-2.5
4,042,006	+		AO353_18340	0.15	-2.2
4,042,006	+		AO353_18340	0.15	+0.8
4,042,007	-		AO353_18340	0.16	+1.0
4,042,007	-		AO353_18340	0.16	+1.0
4,042,007	-		AO353_18340	0.16	+0.4
4,042,007	-		AO353_18340	0.16	-1.3
4,042,007	-		AO353_18340	0.16	+1.0
4,042,007	-		AO353_18340	0.16	-0.6
4,042,007	-		AO353_18340	0.16	+0.2
4,042,138	+		AO353_18340	0.37	+0.6
4,042,138	+		AO353_18340	0.37	+2.3
4,042,139	-		AO353_18340	0.37	-0.2
4,042,139	-		AO353_18340	0.37	-0.3
4,042,139	-		AO353_18340	0.37	+1.1
4,042,139	-		AO353_18340	0.37	-0.8
4,042,205	+		AO353_18340	0.48	-2.0
4,042,205	+		AO353_18340	0.48	+0.7
4,042,206	-		AO353_18340	0.48	-1.0
4,042,206	-		AO353_18340	0.48	+1.7