Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18195

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
4,004,262	+				-0.4
4,004,263	-				+0.7
4,004,263	-				+1.0
4,004,263	-				-0.6
4,004,263	-				+0.3
4,004,270	+				-0.5
4,004,270	+				-1.0
4,004,270	+				+0.5
4,004,271	-				+1.0
4,004,271	-				-0.4
4,004,271	-				-0.2
4,004,285	-				-0.5
4,004,285	-				+0.8
4,004,288	+				-2.2
4,004,288	+				+0.1
4,004,288	+				+1.0
4,004,288	+				+0.6
4,004,288	+				-0.2
4,004,289	-				+1.4
4,004,315	+				+0.7
4,004,316	-				-2.0
4,004,316	-				+0.4
4,004,316	-				+0.5
4,004,399	+				-0.4
4,004,399	+				+1.6
4,004,400	-				+1.3
4,004,400	-				+0.8
4,004,498	+				-0.6
4,004,499	-				+0.6
4,004,512	+				+0.3
4,004,512	+				-1.6
4,004,512	+				-1.0
4,004,512	+				-0.7
4,004,512	+				-0.2
4,004,512	+				-1.6
4,004,512	+				-0.0
4,004,512	+				+1.0
4,004,512	+				-1.5
4,004,513	-				-0.6
4,004,513	-				-2.3
4,004,513	-				-1.0
4,004,513	-				+0.6
4,004,513	-				+1.0
4,004,513	-				+0.4
4,004,513	-				-1.0
4,004,513	-				+0.6
4,004,573	+		AO353_18190	0.14	-0.5
4,004,573	+		AO353_18190	0.14	-0.4
4,004,574	-		AO353_18190	0.14	+0.4
4,004,586	+		AO353_18190	0.16	-0.0
4,004,586	+		AO353_18190	0.16	+0.2
4,004,586	+		AO353_18190	0.16	-0.6
4,004,587	-		AO353_18190	0.16	+0.4
4,004,793	+		AO353_18190	0.48	+0.4
4,004,793	+		AO353_18190	0.48	+0.7
4,004,793	+		AO353_18190	0.48	+0.4
4,004,793	+		AO353_18190	0.48	+0.9
4,004,793	+		AO353_18190	0.48	-0.2
4,004,793	+		AO353_18190	0.48	-2.0
4,004,793	+		AO353_18190	0.48	-0.3
4,004,793	+		AO353_18190	0.48	+0.6
4,004,793	+		AO353_18190	0.48	-1.0
4,004,793	+		AO353_18190	0.48	+0.6
4,004,793	+		AO353_18190	0.48	+1.0
4,004,793	+		AO353_18190	0.48	+1.0
4,004,793	+		AO353_18190	0.48	-0.8
4,004,794	-		AO353_18190	0.48	+0.7
4,004,794	-		AO353_18190	0.48	-0.0
4,004,794	-		AO353_18190	0.48	-0.4
4,004,794	-		AO353_18190	0.48	+1.0
4,004,794	-		AO353_18190	0.48	+0.6
4,004,794	-		AO353_18190	0.48	-1.2
4,004,794	-		AO353_18190	0.48	+1.0
4,004,794	-		AO353_18190	0.48	+1.0
4,004,794	-		AO353_18190	0.48	-1.6
4,004,794	-		AO353_18190	0.48	+1.4
4,004,794	-		AO353_18190	0.48	-0.3
4,004,794	-		AO353_18190	0.48	+0.2
4,004,911	+		AO353_18190	0.66	+0.2
4,004,911	+		AO353_18190	0.66	+1.9
4,004,911	+		AO353_18190	0.66	-1.7
4,004,911	+		AO353_18190	0.66	-0.4
4,004,912	-		AO353_18190	0.66	-1.6
4,005,064	-		AO353_18190	0.90	+1.3
4,005,064	-		AO353_18190	0.90	-0.7
4,005,064	-		AO353_18190	0.90	-1.0
4,005,075	+				-0.1
4,005,075	+				-0.1
4,005,075	+				-0.3
4,005,075	+				-3.0
4,005,075	+				+1.2
4,005,075	+				-1.6
4,005,075	+				+0.7
4,005,076	-				-0.6
4,005,076	-				+0.3
4,005,076	-				+0.3
4,005,076	-				-0.3
4,005,076	-				-0.0
4,005,085	-				+1.0
4,005,087	+				+0.3
4,005,087	+				+0.7
4,005,087	+				+1.6
4,005,087	+				+0.7
4,005,087	+				+1.0
4,005,087	+				+2.6
4,005,088	-				-0.3
4,005,088	-				-0.9
4,005,088	-				-0.6
4,005,088	-				-0.6
4,005,164	+				-0.2
4,005,164	+				+1.4
4,005,165	-				-1.0
4,005,165	-				+1.0
4,005,165	-				+1.4
4,005,172	-				+1.8
4,005,539	-		AO353_18195	0.11	+0.1
4,005,688	-		AO353_18195	0.16	-0.0
4,005,688	-		AO353_18195	0.16	-1.3
4,005,688	-		AO353_18195	0.16	-1.2
4,005,993	+		AO353_18195	0.26	-0.5
4,005,993	+		AO353_18195	0.26	-0.7
4,005,994	-		AO353_18195	0.26	+1.0
4,006,193	+		AO353_18195	0.32	+0.1
4,006,193	+		AO353_18195	0.32	+0.8
4,006,197	+		AO353_18195	0.32	+1.5
4,006,197	+		AO353_18195	0.32	-0.5
4,006,197	+		AO353_18195	0.32	+1.0
4,006,197	+		AO353_18195	0.32	+1.0
4,006,198	-		AO353_18195	0.32	-0.6
4,006,198	-		AO353_18195	0.32	+1.2
4,006,402	-		AO353_18195	0.38	-0.3
4,006,402	-		AO353_18195	0.38	+1.4
4,006,402	-		AO353_18195	0.38	+1.0
4,006,402	-		AO353_18195	0.38	-1.1
4,006,442	-		AO353_18195	0.40	+1.6
4,006,442	-		AO353_18195	0.40	-0.0
4,006,517	+		AO353_18195	0.42	+0.5
4,006,518	-		AO353_18195	0.42	+0.6
4,006,518	-		AO353_18195	0.42	+0.3
4,006,635	+		AO353_18195	0.46	-0.0
4,006,635	+		AO353_18195	0.46	-0.8
4,006,635	+		AO353_18195	0.46	+1.6
4,006,635	+		AO353_18195	0.46	-0.5
4,006,635	+		AO353_18195	0.46	+2.0
4,006,635	+		AO353_18195	0.46	+0.5
4,006,636	-		AO353_18195	0.46	-1.3
4,006,636	-		AO353_18195	0.46	-0.0
4,006,636	-		AO353_18195	0.46	+1.0
4,006,671	+		AO353_18195	0.47	+0.2
4,006,671	+		AO353_18195	0.47	-1.5
4,006,671	+		AO353_18195	0.47	-0.5
4,006,671	+		AO353_18195	0.47	-0.0
4,006,672	-		AO353_18195	0.47	-1.0
4,006,672	-		AO353_18195	0.47	+1.8
4,006,818	+		AO353_18195	0.51	+0.2
4,006,818	+		AO353_18195	0.51	+3.0
4,006,818	+		AO353_18195	0.51	-0.5
4,006,818	+		AO353_18195	0.51	-0.8
4,006,819	-		AO353_18195	0.51	-0.7
4,006,819	-		AO353_18195	0.51	+0.7
4,006,819	-		AO353_18195	0.51	+0.5
4,006,881	+		AO353_18195	0.53	+0.2
4,006,882	-		AO353_18195	0.53	+0.3
4,006,991	-		AO353_18195	0.57	+0.6
4,007,060	+		AO353_18195	0.59	+2.8
4,007,060	+		AO353_18195	0.59	+0.3
4,007,061	-		AO353_18195	0.59	+0.1
4,007,061	-		AO353_18195	0.59	-0.8
4,007,061	-		AO353_18195	0.59	+1.5
4,007,118	+		AO353_18195	0.61	+0.4
4,007,118	+		AO353_18195	0.61	+0.3
4,007,118	+		AO353_18195	0.61	+0.3
4,007,119	-		AO353_18195	0.61	+0.2
4,007,119	-		AO353_18195	0.61	+0.1
4,007,119	-		AO353_18195	0.61	+1.0
4,007,119	-		AO353_18195	0.61	-1.6
4,007,170	+		AO353_18195	0.62	+0.1
4,007,170	+		AO353_18195	0.62	-0.7
4,007,171	-		AO353_18195	0.62	-0.4
4,007,171	-		AO353_18195	0.62	+0.8
4,007,187	-		AO353_18195	0.63	-1.2
4,007,187	-		AO353_18195	0.63	+1.6
4,007,187	-		AO353_18195	0.63	+0.6
4,007,189	+		AO353_18195	0.63	-0.2
4,007,189	+		AO353_18195	0.63	-1.0
4,007,189	+		AO353_18195	0.63	-1.1
4,007,189	+		AO353_18195	0.63	-0.0
4,007,190	-		AO353_18195	0.63	-0.2
4,007,190	-		AO353_18195	0.63	+0.6
4,007,190	-		AO353_18195	0.63	-0.8
4,007,190	-		AO353_18195	0.63	+0.5
4,007,190	-		AO353_18195	0.63	-0.8
4,007,303	+		AO353_18195	0.66	+0.8
4,007,304	-		AO353_18195	0.66	-0.0
4,007,360	+		AO353_18195	0.68	-0.2
4,007,360	+		AO353_18195	0.68	-1.6
4,007,360	+		AO353_18195	0.68	-0.0
4,007,360	+		AO353_18195	0.68	+0.1
4,007,360	+		AO353_18195	0.68	-0.1
4,007,360	+		AO353_18195	0.68	-1.0
4,007,360	+		AO353_18195	0.68	+0.4
4,007,360	+		AO353_18195	0.68	+1.2
4,007,361	-		AO353_18195	0.68	+0.5
4,007,361	-		AO353_18195	0.68	+2.0
4,007,361	-		AO353_18195	0.68	-0.0
4,007,361	-		AO353_18195	0.68	+0.8
4,007,363	+		AO353_18195	0.68	-0.0
4,007,364	-		AO353_18195	0.68	-0.3
4,007,364	-		AO353_18195	0.68	+0.3
4,007,427	+		AO353_18195	0.70	+1.0
4,007,427	+		AO353_18195	0.70	+0.2
4,007,427	+		AO353_18195	0.70	-0.4
4,007,427	+		AO353_18195	0.70	+0.1
4,007,428	-		AO353_18195	0.70	+0.8
4,007,428	-		AO353_18195	0.70	-1.8
4,007,428	-		AO353_18195	0.70	-0.5
4,007,577	+		AO353_18195	0.75	+2.4
4,007,577	+		AO353_18195	0.75	-1.2
4,007,577	+		AO353_18195	0.75	-0.0
4,007,577	+		AO353_18195	0.75	+0.3
4,007,577	+		AO353_18195	0.75	-0.4
4,007,578	-		AO353_18195	0.75	+0.5
4,007,578	-		AO353_18195	0.75	+0.7
4,007,578	-		AO353_18195	0.75	+0.1
4,007,703	+		AO353_18195	0.79	+0.7
4,007,703	+		AO353_18195	0.79	+0.5
4,007,703	+		AO353_18195	0.79	+1.6
4,007,703	+		AO353_18195	0.79	+0.7
4,007,704	-		AO353_18195	0.79	+0.6
4,007,704	-		AO353_18195	0.79	+1.3
4,007,704	-		AO353_18195	0.79	-2.0
4,007,704	-		AO353_18195	0.79	+0.2
4,007,704	-		AO353_18195	0.79	-1.0
4,007,704	-		AO353_18195	0.79	-0.0
4,007,819	+		AO353_18195	0.82	-0.6
4,007,819	+		AO353_18195	0.82	+0.3
4,007,819	+		AO353_18195	0.82	-0.0
4,007,820	-		AO353_18195	0.82	+2.3
4,007,822	+		AO353_18195	0.82	+2.6
4,007,822	+		AO353_18195	0.82	+0.1
4,007,823	-		AO353_18195	0.82	-0.9
4,007,823	-		AO353_18195	0.82	-0.6
4,007,823	-		AO353_18195	0.82	+1.1
4,007,823	-		AO353_18195	0.82	+1.3
4,007,823	-		AO353_18195	0.82	+0.4
4,007,823	-		AO353_18195	0.82	-0.0
4,007,915	+		AO353_18195	0.85	-0.0
4,007,915	+		AO353_18195	0.85	-0.0
4,007,915	+		AO353_18195	0.85	+0.2
4,007,916	-		AO353_18195	0.85	-0.5
4,007,916	-		AO353_18195	0.85	+1.6
4,007,921	+		AO353_18195	0.85	+1.0
4,007,921	+		AO353_18195	0.85	+0.8
4,007,921	+		AO353_18195	0.85	+1.7
4,007,921	+		AO353_18195	0.85	+0.3
4,007,921	+		AO353_18195	0.85	+0.3
4,007,921	+		AO353_18195	0.85	-1.0
4,007,921	+		AO353_18195	0.85	+0.8
4,007,922	-		AO353_18195	0.85	-0.8
4,007,922	-		AO353_18195	0.85	+2.0
4,007,938	-		AO353_18195	0.86	+0.1
4,007,938	-		AO353_18195	0.86	+2.6
4,007,964	+				+0.4
4,007,964	+		AO353_18195	0.87	+0.3
4,007,964	+		AO353_18195	0.87	+1.0
4,007,964	+		AO353_18195	0.87	-0.0
4,007,964	+		AO353_18195	0.87	+0.6
4,007,965	-		AO353_18195	0.87	+0.6
4,007,965	-		AO353_18195	0.87	-1.3
4,007,967	+		AO353_18195	0.87	-1.3
4,007,967	+		AO353_18195	0.87	-0.7
4,007,967	+		AO353_18195	0.87	+0.3
4,007,968	-		AO353_18195	0.87	+0.7
4,007,968	-		AO353_18195	0.87	-0.8
4,007,996	+		AO353_18195	0.88	-0.0
4,007,997	-		AO353_18195	0.88	+1.0
4,007,997	-		AO353_18195	0.88	-0.7
4,008,081	+				+1.5
4,008,082	-				-0.0
4,008,082	-				+0.3
4,008,332	-				+0.5
4,008,332	-				-2.2
4,008,349	+				+1.7
4,008,349	+				+0.7
4,008,349	+				+1.0
4,008,350	-				+0.0
4,008,350	-				-0.6
4,008,350	-				+0.7
4,008,350	-				+0.2
4,008,350	-				+1.0
4,008,433	+				+2.6
4,008,433	+				-0.0
4,008,572	+				-0.3
4,008,573	-				+1.3
4,008,573	-				-0.4
4,008,580	-				-1.2
4,008,580	-				-0.5
4,008,754	+		AO353_18200	0.24	+1.0
4,008,754	+		AO353_18200	0.24	+1.3
4,008,754	+		AO353_18200	0.24	-0.3
4,008,755	-		AO353_18200	0.24	-0.5
4,008,755	-		AO353_18200	0.24	-1.9
4,008,755	-		AO353_18200	0.24	+0.4
4,008,755	-		AO353_18200	0.24	-0.4
4,008,755	-		AO353_18200	0.24	+1.3
4,008,763	+		AO353_18200	0.25	-1.3
4,008,763	+		AO353_18200	0.25	+1.0
4,008,763	+		AO353_18200	0.25	-2.6
4,008,763	+		AO353_18200	0.25	+2.0
4,008,763	+		AO353_18200	0.25	+0.8
4,008,829	+		AO353_18200	0.30	-1.9
4,008,829	+		AO353_18200	0.30	-0.8
4,008,830	-		AO353_18200	0.30	+0.3
4,008,947	+		AO353_18200	0.40	+0.4
4,008,947	+		AO353_18200	0.40	+0.8
4,008,948	-		AO353_18200	0.40	+0.2
4,008,948	-		AO353_18200	0.40	-0.1
4,008,988	+		AO353_18200	0.44	+0.6
4,008,988	+		AO353_18200	0.44	-1.3
4,008,989	-		AO353_18200	0.44	-0.8
4,008,989	-		AO353_18200	0.44	+0.6
4,008,989	-		AO353_18200	0.44	+0.4
4,009,037	+		AO353_18200	0.48	+0.6
4,009,037	+		AO353_18200	0.48	+0.4
4,009,038	-		AO353_18200	0.48	-0.5
4,009,038	-		AO353_18200	0.48	+0.8
4,009,038	-		AO353_18200	0.48	+0.5
4,009,038	-		AO353_18200	0.48	-0.0
4,009,038	-		AO353_18200	0.48	-0.4