Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17525

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
3,865,708	+				+1.0
3,865,708	+				+1.5
3,865,708	+				+0.8
3,865,708	+				+1.0
3,865,708	+				+1.0
3,865,708	+				-0.5
3,865,708	+				+0.6
3,865,708	+				+0.2
3,865,709	-				-2.1
3,865,709	-				+0.0
3,865,709	-				-1.0
3,865,709	-				-0.4
3,865,709	-				+1.2
3,865,709	-				-0.3
3,865,709	-				+0.6
3,865,709	-				+0.0
3,865,709	-				+0.5
3,865,709	-				+1.0
3,865,709	-				+0.3
3,865,709	-				+0.0
3,865,709	-				+0.0
3,865,710	+				+1.2
3,865,710	+				+1.5
3,865,710	+				-0.5
3,865,710	+				+1.0
3,865,710	+				+0.2
3,865,710	+				-2.1
3,865,710	+				+0.1
3,865,710	+				+0.2
3,865,710	+				+1.0
3,865,710	+				-1.0
3,865,710	+				-1.5
3,865,710	+				-0.4
3,865,710	+				-1.8
3,865,710	+				-0.5
3,865,710	+				+0.3
3,865,710	+				-2.1
3,865,710	+				-0.8
3,865,710	+				+0.7
3,865,710	+				-1.0
3,865,711	-				-2.1
3,865,711	-				+1.9
3,865,711	-				+0.2
3,865,711	-				+2.2
3,865,711	-				+1.0
3,865,711	-				+0.4
3,865,711	-				-1.4
3,865,711	-				-1.0
3,865,711	-				+0.6
3,865,711	-				+0.1
3,865,711	-				+0.5
3,865,711	-				-0.6
3,865,711	-				+0.7
3,865,711	-				+0.8
3,865,711	-				+0.0
3,865,735	+				-1.2
3,865,735	+				+0.4
3,865,735	+				+0.6
3,865,735	+				+1.5
3,865,735	+				+1.0
3,865,735	+				-1.1
3,865,736	-				-0.8
3,865,736	-				-0.2
3,865,736	-				-0.4
3,865,736	-				-0.7
3,865,736	-				+1.4
3,865,736	-				+1.0
3,865,736	-				-1.0
3,865,736	-				+0.0
3,865,736	-				+2.6
3,865,736	-				+0.5
3,865,736	-				-1.0
3,865,736	-				+2.0
3,865,736	-				+0.1
3,865,736	-				-0.1
3,865,736	-				-1.5
3,865,736	-				-1.1
3,865,788	-				+0.6
3,865,813	+				-2.3
3,865,813	+				+0.4
3,865,813	+				+2.6
3,865,813	+				+1.1
3,865,813	+				+0.5
3,865,813	+				+0.3
3,865,814	-				+1.0
3,865,814	-				+1.6
3,865,814	-				-0.1
3,865,829	+				-0.1
3,865,863	+				-0.5
3,865,863	+				+1.0
3,865,863	+				-0.8
3,865,864	-				+0.2
3,865,864	-				+0.0
3,865,867	+				+0.6
3,865,867	+				+1.0
3,865,867	+				-0.5
3,865,867	+				-1.0
3,865,867	+				+0.2
3,865,867	+				-0.8
3,865,867	+				+0.7
3,865,867	+				+0.0
3,865,867	+				+0.1
3,865,867	+				-0.3
3,865,867	+				-0.5
3,865,867	+				+0.5
3,865,867	+				+0.6
3,865,867	+				+1.0
3,865,867	+				+0.3
3,865,867	+				-0.1
3,865,867	+				+0.0
3,865,867	+				+2.0
3,865,867	+				+1.6
3,865,867	+				+0.6
3,865,867	+				-0.2
3,865,867	+				+0.5
3,865,867	+				+0.8
3,865,867	+				+1.2
3,865,867	+				+0.3
3,865,868	-				+0.6
3,865,868	-				+2.0
3,865,868	-				+1.0
3,865,868	-				+1.0
3,865,868	-				-2.0
3,865,868	-				-0.5
3,865,868	-				+1.6
3,865,868	-				+0.0
3,865,868	-				+2.0
3,865,868	-				+0.2
3,865,868	-				+2.0
3,865,868	-				+0.0
3,865,868	-				+1.0
3,865,868	-				-1.0
3,865,868	-				+1.8
3,865,868	-				-0.3
3,865,868	-				-0.3
3,865,868	-				-0.4
3,865,868	-				+1.0
3,865,868	-				+1.0
3,865,868	-				-2.1
3,865,868	-				-0.5
3,865,868	-				-0.5
3,865,868	-				+0.0
3,865,868	-				+0.7
3,865,868	-				+0.7
3,865,868	-				-0.2
3,865,962	+				+1.8
3,865,962	+				-1.3
3,865,962	+				-0.4
3,865,963	-				+0.5
3,865,963	-				-2.0
3,865,963	-				+2.6
3,865,963	-				-1.8
3,865,964	+				+1.5
3,865,964	+				+2.0
3,865,964	+				-1.0
3,865,964	+				+0.6
3,865,964	+				-0.5
3,865,964	+				-1.0
3,865,964	+				+0.3
3,865,964	+				-0.5
3,865,964	+				+0.0
3,865,964	+				+1.0
3,865,964	+				-0.5
3,865,965	-				-0.3
3,865,965	-				-1.3
3,865,965	-				+0.9
3,865,965	-				+0.9
3,865,965	-				-0.2
3,865,965	-				-0.2
3,865,965	-				-0.2
3,865,965	-				-0.3
3,865,965	-				+0.7
3,865,965	-				-0.8
3,865,965	-				+0.4
3,865,965	-				-0.3
3,865,965	-				-0.6
3,865,965	-				+0.5
3,865,965	-				+0.3
3,865,965	-				+0.6
3,865,965	-				-0.2
3,865,965	-				+0.3
3,865,965	-				+0.0
3,866,000	+				-0.5
3,866,001	-				-1.1
3,866,066	+				-2.4
3,866,066	+				+0.0
3,866,066	+				-1.5
3,866,066	+				+0.0
3,866,066	+				+0.3
3,866,066	+				+1.8
3,866,066	+				-0.5
3,866,066	+				+0.6
3,866,066	+				+0.6
3,866,066	+				-0.4
3,866,067	-				+1.5
3,866,067	-				-1.5
3,866,067	-				+1.5
3,866,067	-				+0.5
3,866,070	+				+1.0
3,866,070	+				+1.2
3,866,070	+				+0.7
3,866,070	+				-1.4
3,866,070	+				+1.0
3,866,071	-				+0.5
3,866,071	-				+1.4
3,866,071	-				-0.1
3,866,071	-				+0.7
3,866,071	-				-2.0
3,866,071	-				+0.5
3,866,071	-				-0.4
3,866,071	-				+0.0
3,866,071	-				-1.8
3,866,071	-				+1.6
3,866,100	+				-0.2
3,866,101	-				+0.8
3,866,116	-				-1.0
3,866,225	+		AO353_17520	0.43	+0.2
3,866,226	-		AO353_17520	0.43	+1.2
3,866,226	-		AO353_17520	0.43	-0.2
3,866,303	+		AO353_17520	0.74	-0.4
3,866,303	+		AO353_17520	0.74	+1.6
3,866,303	+		AO353_17520	0.74	+1.0
3,866,304	-		AO353_17520	0.75	-0.4
3,866,304	-		AO353_17520	0.75	+0.0
3,866,304	-		AO353_17520	0.75	-1.8
3,866,345	+				-1.4
3,866,346	-				+0.2
3,866,346	-				+0.9
3,866,403	+				-0.1
3,866,403	+				+1.0
3,866,403	+				-0.3
3,866,403	+				+1.0
3,866,403	+				-0.2
3,866,403	+				-0.5
3,866,404	-				+1.3
3,866,441	+				+2.0
3,866,450	+				+0.2
3,866,465	+				-0.4
3,866,465	+				-0.3
3,866,488	+				-0.4
3,866,488	+				+0.7
3,866,488	+				+0.6
3,866,488	+				-1.3
3,866,489	-				-1.0
3,866,489	-				-0.1
3,866,489	-				+0.3
3,866,489	-				-0.2
3,866,489	-				-2.1
3,866,489	-				+0.5
3,866,551	+				+0.4
3,866,551	+				-0.3
3,866,552	-				+0.4
3,866,622	+				-0.4
3,866,656	+				-1.1
3,866,656	+				+0.3
3,866,657	-				+0.8
3,866,752	+		AO353_17525	0.69	-0.5
3,866,752	+		AO353_17525	0.69	+1.0
3,866,761	+		AO353_17525	0.81	+0.9
3,866,761	+		AO353_17525	0.81	+1.3
3,866,762	-		AO353_17525	0.82	+1.3
3,866,762	-		AO353_17525	0.82	+2.0
3,866,763	+		AO353_17525	0.84	+1.5
3,866,763	+		AO353_17525	0.84	+1.6
3,866,763	+		AO353_17525	0.84	-0.1
3,866,763	+		AO353_17525	0.84	-1.0
3,866,763	+		AO353_17525	0.84	+0.5
3,866,764	-		AO353_17525	0.85	-0.2
3,866,764	-		AO353_17525	0.85	+1.8
3,866,764	-		AO353_17525	0.85	-1.3
3,866,764	-		AO353_17525	0.85	+0.6
3,866,764	-		AO353_17525	0.85	+0.0
3,866,842	+				+1.7
3,866,842	+				+1.0
3,866,842	+				+0.0
3,866,842	+				+1.6
3,866,842	+				-2.1
3,866,842	+				-0.1
3,866,842	+				-0.7
3,866,843	-				+1.0
3,866,920	+				+0.0
3,866,921	-				+1.0
3,866,977	+				+0.6
3,866,977	+				+0.6
3,866,977	+				+1.2
3,866,977	+				+0.0
3,866,977	+				+0.8
3,866,978	-				+0.0
3,866,978	-				-0.5
3,866,978	-				+0.0
3,866,978	-				-1.4
3,866,978	-				-0.2
3,866,978	-				-2.0
3,866,986	+				+0.5
3,866,986	+				+0.5
3,866,986	+				-1.5
3,866,986	+				-0.3
3,866,986	+				+0.6
3,866,987	-				+0.0
3,866,987	-				+1.0
3,866,987	-				+0.0
3,866,987	-				+0.2
3,866,987	-				+0.0
3,866,987	-				+1.5
3,866,990	+				+0.2
3,866,990	+				+0.2
3,866,990	+				-1.2
3,866,990	+				-1.3
3,866,990	+				+1.0
3,866,990	+				-1.0
3,866,990	+				-1.0
3,866,990	+				+0.3
3,866,990	+				+0.7
3,866,990	+				+1.2
3,866,990	+				+0.0
3,866,990	+				-0.4
3,866,991	-				-1.3
3,866,991	-				+1.2
3,866,991	-				-2.4
3,866,991	-				-0.8
3,866,991	-				-2.4
3,867,234	+		AO353_17530	0.24	+0.3
3,867,234	+		AO353_17530	0.24	-0.3
3,867,234	+		AO353_17530	0.24	-0.7
3,867,234	+		AO353_17530	0.24	-1.0
3,867,234	+		AO353_17530	0.24	+0.0
3,867,235	-		AO353_17530	0.24	-0.2
3,867,297	+		AO353_17530	0.31	-0.7
3,867,297	+		AO353_17530	0.31	+0.7
3,867,298	-		AO353_17530	0.31	+0.4
3,867,298	-		AO353_17530	0.31	-2.0
3,867,298	-		AO353_17530	0.31	-0.2
3,867,298	-		AO353_17530	0.31	+1.4
3,867,320	+		AO353_17530	0.34	-0.5
3,867,320	+		AO353_17530	0.34	-0.1
3,867,320	+		AO353_17530	0.34	-0.8
3,867,320	+		AO353_17530	0.34	-0.5
3,867,320	+		AO353_17530	0.34	-1.7
3,867,320	+		AO353_17530	0.34	-0.8
3,867,321	-		AO353_17530	0.34	-0.3
3,867,321	-		AO353_17530	0.34	-2.1
3,867,321	-		AO353_17530	0.34	-0.1
3,867,321	-		AO353_17530	0.34	+0.0
3,867,384	+		AO353_17530	0.41	+0.3
3,867,384	+		AO353_17530	0.41	+1.0
3,867,384	+		AO353_17530	0.41	+0.3
3,867,384	+		AO353_17530	0.41	+0.2
3,867,384	+		AO353_17530	0.41	-1.5
3,867,385	-		AO353_17530	0.41	-0.3
3,867,385	-		AO353_17530	0.41	-0.5
3,867,475	-		AO353_17530	0.51	+1.4
3,867,475	-		AO353_17530	0.51	+2.4
3,867,495	+		AO353_17530	0.53	+1.0
3,867,495	+		AO353_17530	0.53	+1.0
3,867,732	+		AO353_17530	0.80	+0.0
3,867,733	-		AO353_17530	0.80	+1.0