Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12945

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
2,865,195	+				+2.3
2,865,195	+				+2.0
2,865,196	-				+0.8
2,865,196	-				+1.7
2,865,196	-				+0.2
2,865,196	-				+0.4
2,865,196	-				+0.8
2,865,331	+		AO353_12940	0.22	+2.4
2,865,362	+		AO353_12940	0.25	+1.7
2,865,362	+		AO353_12940	0.25	+1.6
2,865,363	-		AO353_12940	0.25	+2.6
2,865,363	-		AO353_12940	0.25	+0.9
2,865,363	-		AO353_12940	0.25	+1.4
2,865,440	+		AO353_12940	0.32	+1.4
2,865,563	+		AO353_12940	0.43	+2.1
2,865,563	+		AO353_12940	0.43	+2.0
2,865,563	+		AO353_12940	0.43	+1.7
2,865,563	+		AO353_12940	0.43	+2.2
2,865,564	-		AO353_12940	0.43	+0.3
2,865,692	+		AO353_12940	0.54	+1.0
2,865,693	-		AO353_12940	0.55	+0.6
2,865,854	+		AO353_12940	0.69	-0.6
2,865,854	+		AO353_12940	0.69	+0.9
2,865,854	+		AO353_12940	0.69	+0.7
2,865,854	+		AO353_12940	0.69	+2.6
2,865,855	-		AO353_12940	0.69	+0.9
2,865,855	-		AO353_12940	0.69	+2.2
2,865,855	-		AO353_12940	0.69	+1.7
2,865,855	-		AO353_12940	0.69	+1.1
2,865,855	-		AO353_12940	0.69	+2.3
2,865,855	-		AO353_12940	0.69	-0.1
2,865,857	+		AO353_12940	0.69	+0.4
2,865,857	+		AO353_12940	0.69	+1.7
2,865,858	-		AO353_12940	0.69	+2.4
2,866,070	+		AO353_12940	0.89	-0.2
2,866,071	-		AO353_12940	0.89	+1.6
2,866,073	+		AO353_12940	0.89	+2.5
2,866,073	+		AO353_12940	0.89	+1.9
2,866,073	+		AO353_12940	0.89	+1.6
2,866,073	+		AO353_12940	0.89	+1.7
2,866,073	+		AO353_12940	0.89	+1.2
2,866,073	+		AO353_12940	0.89	+0.7
2,866,074	-		AO353_12940	0.89	+1.4
2,866,124	+				+1.2
2,866,124	+				+1.0
2,866,124	+				+1.4
2,866,124	+				+2.4
2,866,125	-				-0.9
2,866,192	+				+3.4
2,866,192	+				+0.9
2,866,193	-				+0.9
2,866,193	-				+1.8
2,866,193	-				+1.3
2,866,193	-				+1.9
2,866,248	+		AO353_12945	0.11	+1.4
2,866,248	+		AO353_12945	0.11	+3.4
2,866,248	+		AO353_12945	0.11	+2.0
2,866,248	+		AO353_12945	0.11	+3.7
2,866,248	+		AO353_12945	0.11	+2.7
2,866,248	+		AO353_12945	0.11	+3.5
2,866,248	+		AO353_12945	0.11	+3.4
2,866,248	+		AO353_12945	0.11	+1.0
2,866,248	+		AO353_12945	0.11	+2.3
2,866,248	+		AO353_12945	0.11	+2.7
2,866,249	-		AO353_12945	0.11	+3.5
2,866,249	-		AO353_12945	0.11	+4.2
2,866,250	+		AO353_12945	0.12	+1.9
2,866,250	+		AO353_12945	0.12	+2.2
2,866,250	+		AO353_12945	0.12	+3.6
2,866,250	+		AO353_12945	0.12	+2.0
2,866,250	+		AO353_12945	0.12	+3.0
2,866,250	+		AO353_12945	0.12	+2.8
2,866,250	+		AO353_12945	0.12	+0.2
2,866,250	+		AO353_12945	0.12	+3.5
2,866,250	+		AO353_12945	0.12	+0.6
2,866,251	-		AO353_12945	0.12	+3.9
2,866,251	-		AO353_12945	0.12	+5.8
2,866,251	-		AO353_12945	0.12	+5.2
2,866,251	-		AO353_12945	0.12	+3.7
2,866,251	-		AO353_12945	0.12	+3.1
2,866,391	+		AO353_12945	0.35	+2.5
2,866,391	+		AO353_12945	0.35	+2.6
2,866,392	-		AO353_12945	0.35	+3.2
2,866,392	-		AO353_12945	0.35	+4.3
2,866,696	+		AO353_12945	0.85	+1.8
2,866,696	+		AO353_12945	0.85	+2.9
2,866,696	+		AO353_12945	0.85	+3.4
2,866,696	+		AO353_12945	0.85	+3.3
2,866,723	+		AO353_12945	0.90	+2.3
2,866,723	+		AO353_12945	0.90	+3.5
2,866,723	+		AO353_12945	0.90	+2.8
2,866,723	+		AO353_12945	0.90	+2.6
2,866,723	+		AO353_12945	0.90	+2.1
2,866,724	-		AO353_12945	0.90	+1.5
2,866,724	-		AO353_12945	0.90	+0.7
2,866,724	-		AO353_12945	0.90	-0.9
2,866,726	+				+1.6
2,866,726	+				+2.8
2,866,727	-				+1.8
2,866,740	+				+2.9
2,866,741	-				+2.0
2,866,753	+				+2.1
2,866,754	-				+2.9
2,866,787	+				+2.4
2,866,787	+				+2.5
2,866,787	+				+4.0
2,866,787	+				+2.5
2,866,787	+				+2.8
2,866,787	+				+2.8
2,866,787	+				+2.3
2,866,787	+				+4.1
2,866,787	+				+4.0
2,866,788	-				+2.9
2,866,788	-				+2.7
2,866,788	-				+2.9
2,866,788	-				+1.9
2,866,800	-				+2.4
2,866,800	-				+2.6
2,866,814	+				+2.9
2,866,879	+				+2.3
2,866,880	-				+2.1
2,866,880	-				+2.3
2,866,880	-				-0.1
2,866,920	+				+4.3
2,866,920	+				+1.8
2,866,920	+				+2.5
2,866,921	-				+1.2
2,866,921	-				+1.7
2,866,978	+				+1.8
2,866,978	+				+0.4
2,866,978	+				+2.6
2,866,978	+				+2.4
2,866,985	+				+0.4
2,866,986	-				+1.1
2,867,055	+		AO353_12950	0.14	+1.8
2,867,175	+		AO353_12950	0.24	+0.9
2,867,175	+		AO353_12950	0.24	+0.7
2,867,175	+		AO353_12950	0.24	+1.1
2,867,175	+		AO353_12950	0.24	+3.0
2,867,175	+		AO353_12950	0.24	+0.9
2,867,180	+		AO353_12950	0.24	+2.0
2,867,180	+		AO353_12950	0.24	+1.8
2,867,180	+		AO353_12950	0.24	+1.7
2,867,180	+		AO353_12950	0.24	+1.0
2,867,180	+		AO353_12950	0.24	+2.4
2,867,180	+		AO353_12950	0.24	+1.2
2,867,180	+		AO353_12950	0.24	+1.4
2,867,180	+		AO353_12950	0.24	+1.0
2,867,181	-		AO353_12950	0.24	+1.4
2,867,181	-		AO353_12950	0.24	+2.1
2,867,181	-		AO353_12950	0.24	-0.1
2,867,211	+		AO353_12950	0.27	+1.8
2,867,212	-		AO353_12950	0.27	+1.9
2,867,306	+		AO353_12950	0.35	+2.0
2,867,307	-		AO353_12950	0.35	+0.9
2,867,307	-		AO353_12950	0.35	+0.4
2,867,307	-		AO353_12950	0.35	-0.1
2,867,307	-		AO353_12950	0.35	+1.1
2,867,381	+		AO353_12950	0.41	+3.4
2,867,382	-		AO353_12950	0.42	+1.6
2,867,382	-		AO353_12950	0.42	-0.7
2,867,382	-		AO353_12950	0.42	-0.9
2,867,385	+		AO353_12950	0.42	+1.8
2,867,385	+		AO353_12950	0.42	+2.4
2,867,386	-		AO353_12950	0.42	+1.4
2,867,386	-		AO353_12950	0.42	+0.8
2,867,386	-		AO353_12950	0.42	+1.7
2,867,566	+		AO353_12950	0.57	+3.0
2,867,566	+		AO353_12950	0.57	+3.3
2,867,566	+		AO353_12950	0.57	+2.4
2,867,566	+		AO353_12950	0.57	+1.4
2,867,566	+		AO353_12950	0.57	-0.4
2,867,566	+		AO353_12950	0.57	+1.0
2,867,566	+		AO353_12950	0.57	+0.0
2,867,566	+		AO353_12950	0.57	+1.0
2,867,567	-		AO353_12950	0.57	-0.1
2,867,567	-		AO353_12950	0.57	+0.9
2,867,667	+		AO353_12950	0.66	+1.3
2,867,667	+		AO353_12950	0.66	+1.8