Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12085

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
2,654,938	+				+1.9
2,654,938	+				-2.6
2,654,938	+				-0.7
2,654,938	+				-0.8
2,655,387	+		AO353_12075	0.70	-1.4
2,655,387	+		AO353_12075	0.70	-1.4
2,655,387	+		AO353_12075	0.70	+1.6
2,655,388	-		AO353_12075	0.70	-2.0
2,655,388	-		AO353_12075	0.70	-1.0
2,655,388	-		AO353_12075	0.70	+2.6
2,655,388	-		AO353_12075	0.70	+0.8
2,655,402	+		AO353_12075	0.72	-0.0
2,655,402	+		AO353_12075	0.72	+0.6
2,655,402	+		AO353_12075	0.72	-2.4
2,655,402	+		AO353_12075	0.72	-0.4
2,655,402	+		AO353_12075	0.72	-2.6
2,655,402	+		AO353_12075	0.72	-1.3
2,655,402	+		AO353_12075	0.72	-0.8
2,655,402	+		AO353_12075	0.72	+0.2
2,655,402	+		AO353_12075	0.72	-1.0
2,655,402	+		AO353_12075	0.72	-1.0
2,655,402	+		AO353_12075	0.72	-2.8
2,655,402	+		AO353_12075	0.72	+1.6
2,655,402	+		AO353_12075	0.72	+0.6
2,655,402	+		AO353_12075	0.72	-1.3
2,655,402	+		AO353_12075	0.72	-0.6
2,655,402	+		AO353_12075	0.72	+1.1
2,655,402	+		AO353_12075	0.72	-1.4
2,655,402	+		AO353_12075	0.72	-0.4
2,655,402	+		AO353_12075	0.72	+0.4
2,655,403	-		AO353_12075	0.72	-1.1
2,655,403	-		AO353_12075	0.72	-0.5
2,655,403	-		AO353_12075	0.72	-0.5
2,655,403	-		AO353_12075	0.72	-0.2
2,655,403	-		AO353_12075	0.72	-1.3
2,655,403	-		AO353_12075	0.72	-1.6
2,655,403	-		AO353_12075	0.72	-1.4
2,655,403	-		AO353_12075	0.72	-0.6
2,655,403	-		AO353_12075	0.72	+0.6
2,655,403	-		AO353_12075	0.72	-0.6
2,655,403	-		AO353_12075	0.72	-1.3
2,655,405	+		AO353_12075	0.73	-1.6
2,655,405	+		AO353_12075	0.73	-1.6
2,655,405	+		AO353_12075	0.73	-0.0
2,655,405	+		AO353_12075	0.73	-2.4
2,655,405	+		AO353_12075	0.73	-0.6
2,655,405	+		AO353_12075	0.73	-0.7
2,655,405	+		AO353_12075	0.73	-3.0
2,655,405	+		AO353_12075	0.73	-0.4
2,655,406	-		AO353_12075	0.73	-0.0
2,655,406	-		AO353_12075	0.73	-1.8
2,655,406	-		AO353_12075	0.73	-1.8
2,655,406	-		AO353_12075	0.73	+0.4
2,655,406	-		AO353_12075	0.73	-0.3
2,655,451	-		AO353_12075	0.80	-0.1
2,655,743	+		AO353_12080	0.64	-0.4
2,655,743	+		AO353_12080	0.64	-0.2
2,655,743	+		AO353_12080	0.64	+0.6
2,655,746	+		AO353_12080	0.65	+1.3
2,655,746	+		AO353_12080	0.65	-1.8
2,655,746	+		AO353_12080	0.65	+1.3
2,655,746	+		AO353_12080	0.65	-0.0
2,655,746	+		AO353_12080	0.65	-1.9
2,655,746	+		AO353_12080	0.65	-0.0
2,655,746	+		AO353_12080	0.65	-0.8
2,655,746	+		AO353_12080	0.65	-0.1
2,655,747	-		AO353_12080	0.66	-0.9
2,655,747	-		AO353_12080	0.66	-0.4
2,655,747	-		AO353_12080	0.66	+1.0
2,655,747	-				-0.4
2,655,747	-		AO353_12080	0.66	+2.1
2,655,747	-		AO353_12080	0.66	-1.3
2,655,747	-		AO353_12080	0.66	-0.2
2,655,747	-		AO353_12080	0.66	+2.1
2,655,864	+				-0.8
2,655,865	-				+1.1
2,655,886	+				+0.8
2,655,887	-				+0.6
2,655,887	-				+0.1
2,655,887	-				-3.3
2,655,887	-				-2.6
2,655,904	+				-0.8
2,655,904	+				-1.0
2,655,904	+				-0.9
2,655,904	+				+0.6
2,656,154	+		AO353_12085	0.37	-1.9
2,656,154	+		AO353_12085	0.37	-1.3
2,656,154	+		AO353_12085	0.37	-1.9
2,656,154	+		AO353_12085	0.37	-0.8
2,656,154	+		AO353_12085	0.37	-0.8
2,656,154	+		AO353_12085	0.37	-0.8
2,656,155	-		AO353_12085	0.38	+0.6
2,656,155	-		AO353_12085	0.38	-0.0
2,656,155	-		AO353_12085	0.38	-1.0
2,656,175	+		AO353_12085	0.40	-1.1
2,656,175	+		AO353_12085	0.40	-0.8
2,656,176	-		AO353_12085	0.40	-0.4
2,656,176	-		AO353_12085	0.40	-0.3
2,656,176	-		AO353_12085	0.40	+1.6
2,656,176	-		AO353_12085	0.40	-0.1
2,656,176	-		AO353_12085	0.40	+0.6
2,656,176	-		AO353_12085	0.40	-1.6
2,656,176	-		AO353_12085	0.40	-0.0
2,656,176	-		AO353_12085	0.40	+0.7
2,656,176	-		AO353_12085	0.40	+1.0
2,656,252	+		AO353_12085	0.51	+0.3
2,656,373	+		AO353_12085	0.67	-0.4
2,656,373	+		AO353_12085	0.67	+0.3
2,656,373	+		AO353_12085	0.67	-1.4
2,656,373	+		AO353_12085	0.67	-0.0
2,656,373	+		AO353_12085	0.67	-0.4
2,656,373	+		AO353_12085	0.67	-1.1
2,656,374	-		AO353_12085	0.67	-0.1
2,656,374	-		AO353_12085	0.67	-1.3
2,656,421	+		AO353_12085	0.74	-1.4
2,656,421	+		AO353_12085	0.74	-1.3
2,656,421	+		AO353_12085	0.74	+1.0
2,656,421	+		AO353_12085	0.74	-0.3
2,656,422	-		AO353_12085	0.74	-0.4
2,656,422	-		AO353_12085	0.74	+1.1
2,656,422	-		AO353_12085	0.74	-0.0
2,656,556	+				-1.3
2,656,557	-				-0.8
2,656,604	+				+0.1
2,656,604	+				-0.9
2,656,604	+				+1.1
2,656,604	+				+0.2
2,656,604	+				-0.9
2,656,604	+				-2.1
2,656,605	-				-3.5
2,656,621	+				-1.9
2,656,621	+				-1.6
2,656,621	+				-2.1
2,656,621	+				-2.4
2,656,621	+				-0.8
2,656,621	+				+0.1
2,656,621	+				+0.7
2,656,621	+				+0.3
2,656,621	+				+1.6
2,656,621	+				-1.3
2,656,621	+				+0.1
2,656,621	+				-0.4
2,656,621	+				+0.8
2,656,622	-				-1.9
2,656,622	-				-1.8
2,656,622	-				-0.6
2,656,622	-				+1.6
2,656,622	-				-1.7
2,656,622	-				-0.3
2,656,768	+		AO353_12090	0.19	-0.6
2,656,769	-		AO353_12090	0.19	-1.6
2,656,769	-		AO353_12090	0.19	-1.8
2,656,769	-		AO353_12090	0.19	-2.0
2,656,769	-		AO353_12090	0.19	-1.9
2,657,086	+		AO353_12090	0.60	-2.9
2,657,339	+				-0.8
2,657,340	-				-0.4
2,657,363	+				-0.8
2,657,363	+				-1.1
2,657,363	+				-1.0
2,657,363	+				+0.1
2,657,363	+				-1.8
2,657,363	+				-0.7
2,657,364	-				-1.6
2,657,364	-				+0.6
2,657,364	-				-0.8
2,657,485	-				+1.0
2,657,503	-				+0.9
2,657,505	+				-0.7
2,657,505	+				-2.6
2,657,505	+				+0.8
2,657,506	-				-0.0
2,657,579	+		AO353_12095	0.15	-0.0
2,657,579	+		AO353_12095	0.15	+1.4
2,657,579	+		AO353_12095	0.15	-1.2
2,657,579	+		AO353_12095	0.15	+0.2