Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11775

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
2,598,413	+				-1.7
2,598,413	+				+2.2
2,598,413	+				+1.3
2,598,414	-				-0.2
2,598,414	-				-1.7
2,598,414	-				+0.3
2,598,414	-				-1.2
2,598,417	+				+0.3
2,598,765	+		AO353_11770	0.49	-0.4
2,598,766	-		AO353_11770	0.49	-1.4
2,599,247	-				-0.6
2,599,295	+				+0.2
2,599,299	-				+1.4
2,599,319	+				+0.3
2,599,346	+				-1.0
2,599,346	+				+0.2
2,599,347	-				+0.7
2,599,362	-				+1.8
2,599,365	-				+0.6
2,599,423	+				+1.3
2,599,423	+				+2.3
2,599,424	-				+0.8
2,599,433	+				+1.8
2,599,433	+				+1.1
2,599,433	+				+1.1
2,599,433	+				+3.6
2,599,434	-				+0.3
2,599,434	-				+0.9
2,599,434	-				+0.9
2,599,434	-				+3.6
2,599,434	-				+1.6
2,599,434	-				+2.7
2,599,434	-				+0.8
2,599,434	-				+2.4
2,599,704	+		AO353_11775	0.19	+2.1
2,599,704	+		AO353_11775	0.19	+1.4
2,599,704	+		AO353_11775	0.19	+1.8
2,599,704	+		AO353_11775	0.19	+1.8
2,599,704	+		AO353_11775	0.19	-0.0
2,599,704	+		AO353_11775	0.19	+1.4
2,599,704	+		AO353_11775	0.19	+1.8
2,599,705	-		AO353_11775	0.19	+2.2
2,599,705	-		AO353_11775	0.19	+1.1
2,599,705	-		AO353_11775	0.19	+1.6
2,599,705	-		AO353_11775	0.19	+0.8
2,599,705	-		AO353_11775	0.19	+1.2
2,599,705	-		AO353_11775	0.19	+0.6
2,599,724	+		AO353_11775	0.20	+0.4
2,599,724	+		AO353_11775	0.20	+0.6
2,599,725	-		AO353_11775	0.20	+1.4
2,599,725	-		AO353_11775	0.20	+0.1
2,599,725	-		AO353_11775	0.20	+2.5
2,599,725	-		AO353_11775	0.20	+0.8
2,599,802	+		AO353_11775	0.25	+1.6
2,599,802	+		AO353_11775	0.25	+0.6
2,599,802	+		AO353_11775	0.25	+0.9
2,599,802	+		AO353_11775	0.25	+1.8
2,599,802	+		AO353_11775	0.25	+0.8
2,599,802	+		AO353_11775	0.25	+1.8
2,599,802	+		AO353_11775	0.25	+1.3
2,599,803	-		AO353_11775	0.26	+1.0
2,599,803	-		AO353_11775	0.26	+1.1
2,600,180	+		AO353_11775	0.50	+1.4
2,600,181	-		AO353_11775	0.50	+1.6
2,600,181	-		AO353_11775	0.50	+2.2
2,600,181	-		AO353_11775	0.50	+1.6
2,600,291	+		AO353_11775	0.57	+1.8
2,600,291	+		AO353_11775	0.57	+1.5
2,600,292	-		AO353_11775	0.57	+2.0
2,600,292	-		AO353_11775	0.57	+1.9
2,600,585	+		AO353_11775	0.76	+1.0
2,600,586	-		AO353_11775	0.76	+2.3
2,600,852	+				+0.8
2,600,852	+				-0.0
2,600,853	-				+3.0
2,600,853	-				+2.1
2,600,853	-				+1.6
2,600,948	+				-1.2
2,600,948	+				+0.8
2,600,948	+				+2.2
2,600,948	+				-0.6
2,600,949	-				+0.4
2,600,949	-				+0.6
2,600,949	-				+1.4
2,600,953	-				+0.6
2,600,972	-				+0.6
2,600,972	-				-1.4
2,601,030	+				+1.1
2,601,031	-				-0.2
2,601,031	-				+0.6
2,601,036	+				-0.7
2,601,037	-				-2.0
2,601,037	-				+0.6
2,601,037	-				+0.8
2,601,037	-				+0.4
2,601,042	+				+0.2
2,601,043	-				+0.2
2,601,043	-				-0.3
2,601,043	-				-0.1
2,601,063	-				+0.1
2,601,063	-				+1.6
2,601,075	+				-0.6
2,601,075	+				+0.2
2,601,085	+				+0.4
2,601,085	+				-1.7
2,601,085	+				-1.0
2,601,085	+				-0.8
2,601,085	+				+0.7
2,601,085	+				-0.2
2,601,085	+				-0.4
2,601,085	+				+0.3
2,601,085	+				+0.8
2,601,085	+				+0.4
2,601,085	+				+1.0
2,601,085	+				+0.2
2,601,085	+				-0.2
2,601,085	+				-1.7
2,601,085	+				-0.2
2,601,085	+				+1.0
2,601,085	+				-1.9
2,601,086	-				-0.1
2,601,086	-				-0.7
2,601,086	-				+0.6
2,601,086	-				+1.8
2,601,086	-				+1.0
2,601,086	-				-0.5
2,601,086	-				-0.1
2,601,086	-				+0.4
2,601,086	-				+0.2
2,601,086	-				-1.0
2,601,086	-				-0.3
2,601,086	-				-0.4
2,601,086	-				+0.2
2,601,086	-				+0.1
2,601,086	-				-0.0
2,601,086	-				-0.9
2,601,086	-				+0.2
2,601,086	-				-0.9
2,601,086	-				-0.1
2,601,086	-				-0.0
2,601,086	-				+0.6
2,601,086	-				-1.4
2,601,086	-				+1.0
2,601,086	-				-1.0
2,601,086	-				+0.7
2,601,086	-				-0.2
2,601,086	-				+0.3
2,601,086	-				-0.7
2,601,086	-				-0.5
2,601,116	+				-0.0
2,601,116	+				-0.4
2,601,117	-				-1.4
2,601,145	+		AO353_11780	0.17	+1.2
2,601,145	+		AO353_11780	0.17	-0.0
2,601,146	-		AO353_11780	0.17	+0.3
2,601,232	+		AO353_11780	0.41	-0.0
2,601,233	-		AO353_11780	0.41	-1.5
2,601,233	-		AO353_11780	0.41	-0.2
2,601,248	-		AO353_11780	0.45	+0.6
2,601,248	-		AO353_11780	0.45	+0.6
2,601,480	+				-0.6
2,601,515	-		AO353_11785	0.20	+0.1
2,601,538	+		AO353_11785	0.33	-0.7
2,601,539	-		AO353_11785	0.33	+0.6
2,601,587	+		AO353_11785	0.60	+2.6
2,601,587	+		AO353_11785	0.60	-0.6
2,601,587	+		AO353_11785	0.60	-0.9
2,601,587	+		AO353_11785	0.60	+0.8
2,601,587	+		AO353_11785	0.60	+0.3
2,601,587	+		AO353_11785	0.60	+0.9
2,601,588	-		AO353_11785	0.61	+0.1
2,601,588	-		AO353_11785	0.61	+1.0
2,601,588	-		AO353_11785	0.61	+0.2
2,601,588	-		AO353_11785	0.61	+0.5
2,601,588	-		AO353_11785	0.61	+0.7
2,601,588	-		AO353_11785	0.61	-1.2
2,601,602	+		AO353_11785	0.68	-2.8
2,601,602	+		AO353_11785	0.68	-2.9
2,601,602	+		AO353_11785	0.68	-0.0
2,601,602	+		AO353_11785	0.68	+2.6
2,601,603	-		AO353_11785	0.69	-0.0
2,601,603	-		AO353_11785	0.69	-1.9
2,601,824	+		AO353_11790	0.26	+1.4
2,601,824	+		AO353_11790	0.26	-0.1
2,601,824	+		AO353_11790	0.26	-0.8
2,601,825	-		AO353_11790	0.26	+0.9
2,601,825	-		AO353_11790	0.26	+0.3
2,601,825	-		AO353_11790	0.26	-0.1
2,601,825	-		AO353_11790	0.26	-0.0
2,601,825	-		AO353_11790	0.26	+0.4
2,601,849	+		AO353_11790	0.34	+2.2
2,601,849	+		AO353_11790	0.34	-0.0
2,601,849	+		AO353_11790	0.34	-1.9
2,601,849	+		AO353_11790	0.34	+0.5
2,601,850	-		AO353_11790	0.34	+0.0
2,601,850	-		AO353_11790	0.34	-0.4
2,601,850	-		AO353_11790	0.34	+0.3
2,601,850	-		AO353_11790	0.34	+1.7
2,601,850	-		AO353_11790	0.34	-0.7
2,601,850	-		AO353_11790	0.34	-0.2
2,601,926	-		AO353_11790	0.60	-0.2
2,601,926	-		AO353_11790	0.60	-1.7
2,601,926	-		AO353_11790	0.60	-0.6