Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11035

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
2,411,285	+		AO353_11030	0.56	+1.0
2,411,285	+		AO353_11030	0.56	-0.6
2,411,285	+		AO353_11030	0.56	+0.4
2,411,285	+		AO353_11030	0.56	+2.0
2,411,285	+		AO353_11030	0.56	+1.1
2,411,286	-		AO353_11030	0.56	-1.2
2,411,286	-		AO353_11030	0.56	-1.5
2,411,462	+		AO353_11030	0.66	-1.2
2,411,462	+		AO353_11030	0.66	-0.8
2,411,462	+		AO353_11030	0.66	+0.9
2,411,462	+		AO353_11030	0.66	-0.2
2,411,463	-		AO353_11030	0.66	-1.0
2,411,463	-		AO353_11030	0.66	+1.2
2,411,463	-		AO353_11030	0.66	-0.7
2,411,533	+		AO353_11030	0.71	-0.1
2,411,533	+		AO353_11030	0.71	+0.6
2,411,533	+		AO353_11030	0.71	-0.3
2,411,533	+		AO353_11030	0.71	-0.7
2,411,533	+		AO353_11030	0.71	-0.5
2,411,533	+		AO353_11030	0.71	-1.0
2,411,533	+		AO353_11030	0.71	-1.1
2,411,534	-		AO353_11030	0.71	+0.8
2,411,534	-		AO353_11030	0.71	-0.4
2,411,534	-		AO353_11030	0.71	+0.0
2,411,598	+		AO353_11030	0.75	+1.0
2,411,598	+		AO353_11030	0.75	-0.6
2,411,598	+		AO353_11030	0.75	-0.8
2,411,599	-		AO353_11030	0.75	+0.7
2,411,599	-		AO353_11030	0.75	-1.0
2,411,599	-		AO353_11030	0.75	-1.3
2,411,599	-		AO353_11030	0.75	-0.2
2,411,599	-		AO353_11030	0.75	-1.1
2,411,933	+				-0.4
2,411,976	+				+0.4
2,411,976	+				+0.3
2,411,976	+				+0.9
2,411,976	+				+0.4
2,411,976	+				-0.1
2,411,976	+				-0.3
2,411,976	+				+1.1
2,411,977	-				+0.0
2,411,977	-				+0.3
2,411,977	-				-0.4
2,411,977	-				-1.6
2,411,977	-				+0.8
2,411,977	-				+1.3
2,411,977	-				+1.4
2,411,998	+				+1.5
2,411,998	+				+0.8
2,411,998	+				-0.7
2,411,998	+				+0.6
2,411,998	+				+0.6
2,411,998	+				-1.1
2,411,998	+				+0.8
2,411,998	+				-0.8
2,411,998	+				-1.1
2,411,998	+				+0.4
2,411,999	-				-0.3
2,411,999	-				-0.7
2,411,999	-				-1.4
2,411,999	-				-0.5
2,411,999	-				-0.4
2,411,999	-				-1.0
2,411,999	-				+1.6
2,411,999	-				-0.6
2,412,018	+				+0.7
2,412,018	+				+0.0
2,412,018	+				+0.2
2,412,019	-				+0.0
2,412,019	-				+1.9
2,412,080	+				+1.9
2,412,080	+				-0.4
2,412,080	+				-0.7
2,412,080	+				+0.2
2,412,080	+				-0.3
2,412,080	+				-0.1
2,412,080	+				-1.2
2,412,080	+				+0.5
2,412,080	+				+0.9
2,412,080	+				+0.3
2,412,080	+				-0.0
2,412,081	-				+0.3
2,412,081	-				+0.1
2,412,081	-				+1.0
2,412,081	-				-0.1
2,412,081	-				+1.5
2,412,081	-				+0.3
2,412,081	-				-1.0
2,412,081	-				-0.1
2,412,081	-				+0.4
2,412,081	-				+0.8
2,412,081	-				+0.8
2,412,081	-				-2.2
2,412,081	-				+0.1
2,412,081	-				+0.6
2,412,081	-				-0.6
2,412,081	-				+0.5
2,412,081	-				+0.0
2,412,081	-				+0.3
2,412,081	-				+0.9
2,412,081	-				+0.2
2,412,089	+				+2.0
2,412,089	+				-0.4
2,412,089	+				-0.4
2,412,089	+				-0.1
2,412,089	+				+0.5
2,412,089	+				+0.8
2,412,090	-				+1.6
2,412,090	-				+0.2
2,412,090	-				-1.6
2,412,090	-				-0.5
2,412,090	-				+0.2
2,412,093	+				-1.6
2,412,093	+				-0.0
2,412,093	+				+2.6
2,412,093	+				+0.6
2,412,093	+				-0.3
2,412,093	+				+1.3
2,412,093	+				+0.3
2,412,093	+				+0.0
2,412,093	+				+0.1
2,412,093	+				+0.0
2,412,093	+				+0.0
2,412,093	+				-0.4
2,412,093	+				-1.2
2,412,093	+				+0.2
2,412,094	-				-0.8
2,412,094	-				+0.6
2,412,094	-				-1.3
2,412,094	-				+0.0
2,412,094	-				+0.6
2,412,094	-				+0.7
2,412,100	+				+0.0
2,412,100	+				+0.8
2,412,100	+				+0.0
2,412,100	+				+1.6
2,412,100	+				+0.6
2,412,101	-				+0.2
2,412,101	-				-1.0
2,412,101	-				-1.1
2,412,133	+				+0.1
2,412,133	+				-0.6
2,412,133	+				-0.6
2,412,134	-				-0.2
2,412,134	-				-0.6
2,412,134	-				+0.8
2,412,134	-				-1.3
2,412,134	-				+1.6
2,412,134	-				+0.0
2,412,137	+				+0.4
2,412,137	+				+0.4
2,412,137	+				-0.1
2,412,137	+				+1.6
2,412,137	+				-0.2
2,412,137	+				-0.3
2,412,137	+				+0.6
2,412,138	-				-0.4
2,412,138	-				-0.3
2,412,138	-				-0.4
2,412,138	-				-0.4
2,412,138	-				+0.5
2,412,138	-				+0.6
2,412,138	-				-0.2
2,412,138	-				+0.3
2,412,138	-				+0.4
2,412,138	-				-0.9
2,412,138	-				+1.0
2,412,138	-				-1.6
2,412,138	-				-0.1
2,412,138	-				+0.9
2,412,216	+				+0.0
2,412,216	+				+0.2
2,412,216	+				+1.3
2,412,216	+				+1.0
2,412,216	+				-0.2
2,412,216	+				-0.1
2,412,216	+				+0.4
2,412,217	-				-0.1
2,412,217	-				+0.6
2,412,217	-				+0.2
2,412,217	-				+1.6
2,412,217	-				+0.4
2,412,217	-				-0.4
2,412,217	-				-0.4
2,412,217	-				+1.6
2,412,217	-				-1.0
2,412,217	-				-1.1
2,412,217	-				-0.1
2,412,217	-				-1.0
2,412,217	-				+0.3
2,412,233	-				+0.0
2,412,352	+		AO353_11035	0.16	+0.7
2,412,352	+		AO353_11035	0.16	-0.7
2,412,352	+		AO353_11035	0.16	+1.6
2,412,352	+		AO353_11035	0.16	-0.3
2,412,352	+		AO353_11035	0.16	-0.3
2,412,352	+		AO353_11035	0.16	+0.6
2,412,352	+		AO353_11035	0.16	+1.4
2,412,353	-		AO353_11035	0.16	-0.3
2,412,353	-		AO353_11035	0.16	+0.5
2,412,353	-		AO353_11035	0.16	-0.3
2,412,353	-		AO353_11035	0.16	+1.2
2,412,353	-		AO353_11035	0.16	+0.2
2,412,353	-		AO353_11035	0.16	-1.7
2,412,358	+		AO353_11035	0.17	-0.2
2,412,358	+		AO353_11035	0.17	+0.6
2,412,358	+		AO353_11035	0.17	+0.0
2,412,358	+		AO353_11035	0.17	+0.6
2,412,369	+		AO353_11035	0.18	+1.0
2,412,369	+		AO353_11035	0.18	+1.2
2,412,369	+		AO353_11035	0.18	+0.7
2,412,369	+		AO353_11035	0.18	+0.6
2,412,369	+		AO353_11035	0.18	+2.0
2,412,369	+		AO353_11035	0.18	+1.5
2,412,369	+		AO353_11035	0.18	+1.0
2,412,369	+		AO353_11035	0.18	+1.8
2,412,370	-		AO353_11035	0.18	+1.9
2,412,370	-		AO353_11035	0.18	+0.0
2,412,370	-		AO353_11035	0.18	+0.9
2,412,616	+		AO353_11035	0.50	+1.2
2,412,616	+		AO353_11035	0.50	+0.9
2,412,616	+		AO353_11035	0.50	+1.3
2,412,616	+		AO353_11035	0.50	+0.4
2,412,616	+		AO353_11035	0.50	+1.0
2,412,616	+		AO353_11035	0.50	+1.1
2,412,616	+		AO353_11035	0.50	+0.3
2,412,616	+		AO353_11035	0.50	+1.6
2,412,616	+		AO353_11035	0.50	+0.9
2,412,616	+		AO353_11035	0.50	-0.3
2,412,617	-		AO353_11035	0.50	+0.6
2,412,617	-		AO353_11035	0.50	+0.9
2,412,617	-		AO353_11035	0.50	+0.9
2,412,617	-		AO353_11035	0.50	+0.2
2,412,617	-		AO353_11035	0.50	-0.1
2,412,617	-		AO353_11035	0.50	+1.0
2,412,752	+		AO353_11035	0.68	+2.2
2,412,752	+		AO353_11035	0.68	+0.4
2,412,752	+		AO353_11035	0.68	+1.0
2,412,752	+		AO353_11035	0.68	+2.4
2,412,753	-		AO353_11035	0.68	+0.2
2,413,002	+				+0.3
2,413,002	+				+0.6
2,413,002	+				-0.4
2,413,002	+				+0.0
2,413,002	+				+0.5
2,413,002	+				+1.4
2,413,002	+				-0.2
2,413,002	+				+0.1
2,413,003	-				+0.5
2,413,003	-				+0.3
2,413,003	-				-1.0
2,413,003	-				-1.1
2,413,003	-				+0.7
2,413,003	-				+1.6
2,413,003	-				+1.9
2,413,003	-				-0.6
2,413,003	-				+0.7
2,413,003	-				-0.2
2,413,003	-				+1.3
2,413,003	-				+1.1
2,413,021	+				+2.1
2,413,021	+				+1.6
2,413,021	+				-0.4
2,413,041	+				+1.3
2,413,041	+				+1.6
2,413,041	+				+1.6
2,413,041	+				+1.3
2,413,041	+				-1.0
2,413,041	+				-1.0
2,413,041	+				+1.4
2,413,042	-				-1.8
2,413,042	-				-0.4
2,413,042	-				-0.5
2,413,070	+				-0.7
2,413,070	+				+0.6
2,413,070	+				+2.2
2,413,071	-				-0.7
2,413,071	-				-0.1
2,413,071	-				-0.5
2,413,071	-				-0.1
2,413,071	-				-0.1
2,413,120	+				-0.4
2,413,120	+				-0.0
2,413,120	+				+1.6
2,413,121	-				+0.6
2,413,121	-				-0.7
2,413,121	-				-0.4
2,413,121	-				-0.7
2,413,121	-				+1.3
2,413,121	-				+0.0
2,413,139	-				-1.2
2,413,205	+		AO353_11040	0.10	+0.0
2,413,205	+		AO353_11040	0.10	+0.1
2,413,205	+		AO353_11040	0.10	-0.7
2,413,205	+		AO353_11040	0.10	+0.5
2,413,205	+		AO353_11040	0.10	+0.9
2,413,205	+		AO353_11040	0.10	+1.9
2,413,205	+		AO353_11040	0.10	+0.8
2,413,206	-		AO353_11040	0.10	-0.7
2,413,206	-		AO353_11040	0.10	+1.1
2,413,206	-		AO353_11040	0.10	-0.4
2,413,206	-		AO353_11040	0.10	-0.2
2,413,206	-		AO353_11040	0.10	+3.2
2,413,206	-		AO353_11040	0.10	-1.6
2,413,206	-		AO353_11040	0.10	-2.5
2,413,206	-		AO353_11040	0.10	-0.9
2,413,206	-		AO353_11040	0.10	+1.6
2,413,321	+		AO353_11040	0.19	-0.6
2,413,322	-		AO353_11040	0.19	+0.8
2,413,322	-		AO353_11040	0.19	+0.6
2,413,328	+		AO353_11040	0.20	+0.0
2,413,328	+		AO353_11040	0.20	+0.5
2,413,331	+		AO353_11040	0.20	+0.6
2,413,331	+		AO353_11040	0.20	+1.6
2,413,332	-		AO353_11040	0.20	-0.8
2,413,332	-		AO353_11040	0.20	-1.0
2,413,486	-		AO353_11040	0.32	-0.7
2,413,486	-		AO353_11040	0.32	-1.3
2,413,571	+		AO353_11040	0.38	-0.3
2,413,571	+		AO353_11040	0.38	+1.3
2,413,571	+		AO353_11040	0.38	+0.4
2,413,571	+		AO353_11040	0.38	-0.3
2,413,572	-		AO353_11040	0.38	-1.8
2,413,572	-		AO353_11040	0.38	-0.6
2,413,572	-		AO353_11040	0.38	-1.0
2,413,572	-		AO353_11040	0.38	+0.0
2,413,591	-		AO353_11040	0.40	-0.2
2,413,788	+		AO353_11040	0.55	-0.4
2,413,793	+		AO353_11040	0.55	+1.6
2,413,793	+		AO353_11040	0.55	+0.3
2,413,793	+		AO353_11040	0.55	+0.2
2,413,794	-		AO353_11040	0.55	-0.4
2,413,794	-		AO353_11040	0.55	-0.5
2,413,794	-		AO353_11040	0.55	+0.6
2,413,799	+		AO353_11040	0.56	-1.0
2,413,799	+		AO353_11040	0.56	+0.6
2,413,799	+		AO353_11040	0.56	-1.8
2,413,799	+		AO353_11040	0.56	-0.3
2,413,800	-		AO353_11040	0.56	-1.0
2,413,800	-		AO353_11040	0.56	+0.0
2,413,931	-		AO353_11040	0.66	+0.4
2,413,991	+		AO353_11040	0.70	+0.0
2,413,991	+		AO353_11040	0.70	+0.8