Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10705

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
2,345,171	-		AO353_10695	0.64	-0.8
2,345,196	+		AO353_10695	0.72	+0.2
2,345,196	+		AO353_10695	0.72	-1.8
2,345,196	+		AO353_10695	0.72	-0.4
2,345,196	+		AO353_10695	0.72	-1.0
2,345,196	+		AO353_10695	0.72	-2.3
2,345,196	+		AO353_10695	0.72	-0.8
2,345,196	+		AO353_10695	0.72	+0.6
2,345,196	+		AO353_10695	0.72	-0.4
2,345,196	+		AO353_10695	0.72	-2.1
2,345,196	+		AO353_10695	0.72	-1.4
2,345,196	+		AO353_10695	0.72	-0.7
2,345,196	+		AO353_10695	0.72	-0.0
2,345,197	-		AO353_10695	0.72	+1.2
2,345,197	-		AO353_10695	0.72	-0.4
2,345,197	-		AO353_10695	0.72	+0.6
2,345,197	-		AO353_10695	0.72	-0.6
2,345,197	-		AO353_10695	0.72	-1.0
2,345,197	-		AO353_10695	0.72	+0.4
2,345,197	-		AO353_10695	0.72	-1.6
2,345,197	-		AO353_10695	0.72	-2.5
2,345,291	+				+1.6
2,345,291	+				-0.8
2,345,291	+				-1.0
2,345,291	+				-0.4
2,345,291	+				-1.0
2,345,291	+				+0.0
2,345,291	+				+1.3
2,345,291	+				-1.4
2,345,291	+				-0.3
2,345,291	+				+0.3
2,345,291	+				+1.3
2,345,291	+				-1.8
2,345,291	+				-0.4
2,345,291	+				+1.3
2,345,291	+				-2.2
2,345,291	+				+1.3
2,345,291	+				+1.6
2,345,291	+				-1.2
2,345,292	-				+0.2
2,345,292	-				-0.8
2,345,292	-				-0.2
2,345,292	-				+0.8
2,345,292	-				-1.1
2,345,292	-				+1.6
2,345,292	-				-0.4
2,345,292	-				-0.2
2,345,292	-				+0.2
2,345,292	-				+0.2
2,345,292	-				-1.0
2,345,292	-				+0.3
2,345,292	-				-0.7
2,345,292	-				+0.6
2,345,292	-				+1.2
2,345,292	-				-0.5
2,345,292	-				-1.5
2,345,292	-				-1.8
2,345,292	-				-0.2
2,345,300	+				+1.1
2,345,300	+				+0.3
2,345,300	+				-0.1
2,345,301	-				+0.6
2,345,301	-				+0.2
2,345,301	-				+0.4
2,345,301	-				+0.2
2,345,301	-				-1.4
2,345,301	-				+0.7
2,345,301	-				-0.1
2,345,373	+				-1.3
2,345,373	+				-0.5
2,345,373	+				+0.3
2,345,373	+				+0.8
2,345,374	-				-1.2
2,345,374	-				+1.4
2,345,382	+				-0.8
2,345,382	+				+1.6
2,345,382	+				+1.0
2,345,382	+				-1.4
2,345,383	-				+0.4
2,345,383	-				+1.6
2,345,383	-				+0.0
2,345,383	-				-0.0
2,345,402	-				+0.9
2,345,402	-				-2.3
2,345,402	-				+1.0
2,345,410	+				-0.4
2,345,411	-				+0.0
2,345,450	+				-1.4
2,345,450	+				+0.3
2,345,450	+				+0.3
2,345,450	+				+0.6
2,345,450	+				-0.4
2,345,450	+				-0.5
2,345,450	+				-2.2
2,345,451	-				+0.8
2,345,451	-				-0.4
2,345,451	-				+0.0
2,345,451	-				+0.8
2,345,451	-				-1.0
2,345,451	-				-1.0
2,345,451	-				-0.7
2,345,451	-				+0.9
2,345,451	-				+0.2
2,345,451	-				-0.4
2,345,451	-				-0.5
2,345,454	+				+1.0
2,345,454	+				+0.1
2,345,454	+				+0.7
2,345,455	-				-1.5
2,345,455	-				+1.0
2,345,455	-				+0.2
2,345,455	-				+0.3
2,345,455	-				+4.2
2,345,455	-				+0.6
2,345,455	-				+0.3
2,345,457	+				-0.2
2,345,457	+				-0.6
2,345,457	+				+0.6
2,345,481	+				+1.0
2,345,481	+				+0.5
2,345,481	+				-0.4
2,345,482	-				+0.9
2,345,482	-				-0.3
2,345,482	-				+0.7
2,345,499	-		AO353_10700	0.11	+1.6
2,345,541	+		AO353_10700	0.20	-0.5
2,345,541	+		AO353_10700	0.20	+0.7
2,345,553	+		AO353_10700	0.23	-0.4
2,345,553	+		AO353_10700	0.23	+0.3
2,345,553	+		AO353_10700	0.23	-1.1
2,345,554	-		AO353_10700	0.23	+0.5
2,345,595	+		AO353_10700	0.33	-1.8
2,345,595	+		AO353_10700	0.33	-0.2
2,345,595	+		AO353_10700	0.33	-0.7
2,345,595	+		AO353_10700	0.33	+0.3
2,345,595	+		AO353_10700	0.33	+0.8
2,345,595	+		AO353_10700	0.33	-1.8
2,345,595	+		AO353_10700	0.33	+1.0
2,345,595	+		AO353_10700	0.33	+0.9
2,345,595	+		AO353_10700	0.33	-0.5
2,345,596	-		AO353_10700	0.33	+1.0
2,345,596	-		AO353_10700	0.33	-1.0
2,345,596	-		AO353_10700	0.33	+0.2
2,345,596	-		AO353_10700	0.33	-0.3
2,345,596	-		AO353_10700	0.33	+2.0
2,345,596	-		AO353_10700	0.33	-2.8
2,345,596	-		AO353_10700	0.33	-0.7
2,345,596	-		AO353_10700	0.33	+0.8
2,345,596	-		AO353_10700	0.33	+1.0
2,345,598	+		AO353_10700	0.34	-0.2
2,345,599	-		AO353_10700	0.34	-0.3
2,345,667	+		AO353_10700	0.50	+0.4
2,345,667	+		AO353_10700	0.50	+1.9
2,345,667	+		AO353_10700	0.50	-1.0
2,345,667	+		AO353_10700	0.50	-0.5
2,345,667	+		AO353_10700	0.50	+0.0
2,345,668	-		AO353_10700	0.50	-2.3
2,345,668	-		AO353_10700	0.50	-1.2
2,345,728	-		AO353_10700	0.64	+0.6
2,345,728	-		AO353_10700	0.64	+3.4
2,345,813	+		AO353_10700	0.83	-0.4
2,345,813	+		AO353_10700	0.83	-0.5
2,345,813	+		AO353_10700	0.83	-0.2
2,345,813	+		AO353_10700	0.83	-1.0
2,345,813	+		AO353_10700	0.83	+0.6
2,345,814	-		AO353_10700	0.84	+0.6
2,345,814	-		AO353_10700	0.84	-2.2
2,345,814	-		AO353_10700	0.84	+0.6
2,345,814	-		AO353_10700	0.84	-0.7
2,345,814	-		AO353_10700	0.84	+0.7
2,345,846	+				-0.7
2,345,846	+				+1.3
2,345,846	+				-1.8
2,345,846	+				-1.7
2,345,846	+				-0.3
2,345,846	+				+0.8
2,345,846	+				-0.4
2,345,846	+				+0.0
2,345,847	-				-0.6
2,345,847	-				-2.4
2,345,847	-				-0.5
2,345,847	-				-0.3
2,345,847	-				+1.2
2,345,847	-				+1.6
2,345,925	+				+0.4
2,345,925	+				-0.1
2,345,925	+				+0.6
2,345,925	+				-0.2
2,345,925	+				+0.2
2,345,925	+				-0.5
2,345,925	+				-0.4
2,345,925	+				+0.0
2,345,926	-				-0.4
2,345,926	-				+0.8
2,345,926	-				+0.4
2,345,926	-				-0.6
2,345,926	-				-1.7
2,345,926	-				+0.5
2,345,926	-				+0.3
2,345,926	-				+1.6
2,345,926	-				+0.5
2,345,926	-				-0.8
2,345,956	+				-0.2
2,345,956	+				+0.0
2,345,956	+				+0.3
2,345,956	+				-1.0
2,345,956	+				+0.5
2,345,956	+				-0.3
2,345,956	+				+1.0
2,345,956	+				+2.4
2,345,956	+				+3.4
2,345,956	+				-0.6
2,345,957	-				+0.0
2,345,957	-				+0.9
2,345,957	-				+0.8
2,345,957	-				-0.4
2,345,957	-				+0.9
2,345,960	+				+0.8
2,345,960	+				+2.4
2,345,960	+				+1.8
2,345,960	+				-0.5
2,345,960	+				-0.2
2,345,960	+				+1.6
2,345,960	+				+0.6
2,345,960	+				-1.0
2,345,960	+				-0.4
2,345,960	+				-1.2
2,345,960	+				+0.2
2,345,960	+				-1.7
2,345,960	+				+1.0
2,345,961	-				+0.5
2,345,961	-				-0.2
2,345,961	-				-0.5
2,345,961	-				+0.3
2,345,961	-				-1.0
2,345,961	-				-1.4
2,345,961	-				+1.3
2,345,961	-				+0.2
2,345,961	-				-0.7
2,345,961	-				+0.6
2,345,980	+				-0.6
2,345,980	+				+1.2
2,345,980	+				-0.6
2,345,980	+				-1.1
2,345,981	-				+1.0
2,345,981	-				-0.3
2,345,991	+				-0.4
2,345,992	-				-0.7
2,345,992	-				-1.7
2,346,003	+				-1.4
2,346,003	+				+0.5
2,346,003	+				+0.8
2,346,003	+				-1.5
2,346,003	+				-0.9
2,346,003	+				+1.9
2,346,003	+				+0.9
2,346,004	-				-0.1
2,346,004	-				-0.1
2,346,004	-				-0.1
2,346,004	-				+1.6
2,346,004	-				+1.6
2,346,004	-				-0.7
2,346,009	+				-0.4
2,346,009	+				+1.6
2,346,009	+				-0.4
2,346,009	+				+1.6
2,346,009	+				+0.6
2,346,009	+				+1.0
2,346,010	-				+0.4
2,346,010	-				-1.0
2,346,025	+				+0.5
2,346,025	+				+1.2
2,346,026	-				-1.2
2,346,026	-				+0.0
2,346,295	-		AO353_10705	0.35	+1.0
2,346,295	-		AO353_10705	0.35	-1.5
2,346,295	-		AO353_10705	0.35	+0.3
2,346,295	-		AO353_10705	0.35	+1.0
2,346,295	-		AO353_10705	0.35	+1.6
2,346,295	-		AO353_10705	0.35	-1.7
2,346,298	-		AO353_10705	0.36	-0.4
2,346,298	-		AO353_10705	0.36	-0.7
2,346,416	-		AO353_10705	0.50	-2.0
2,346,416	-		AO353_10705	0.50	-1.4
2,346,499	-		AO353_10705	0.60	+0.2
2,346,499	-		AO353_10705	0.60	-1.0
2,346,733	-		AO353_10705	0.89	-0.5
2,346,733	-		AO353_10705	0.89	-1.2
2,346,733	-		AO353_10705	0.89	-1.2
2,346,733	-		AO353_10705	0.89	-0.5
2,346,733	-		AO353_10705	0.89	-1.5
2,346,733	-		AO353_10705	0.89	-1.5
2,346,733	-		AO353_10705	0.89	-0.3
2,346,850	-				-0.7
2,346,850	-				+1.9
2,346,850	-				-0.2
2,346,982	-		AO353_10710	0.13	-0.7
2,346,982	-		AO353_10710	0.13	+0.6
2,347,047	-		AO353_10710	0.19	-0.4
2,347,047	-		AO353_10710	0.19	-0.5
2,347,047	-		AO353_10710	0.19	-2.0
2,347,047	-		AO353_10710	0.19	-1.0
2,347,047	-		AO353_10710	0.19	-1.0
2,347,193	-		AO353_10710	0.31	+1.0
2,347,461	-		AO353_10710	0.52	-0.4
2,347,461	-		AO353_10710	0.52	-1.2
2,347,461	-		AO353_10710	0.52	+1.6
2,347,461	-		AO353_10710	0.52	-1.0
2,347,461	-		AO353_10710	0.52	-1.0
2,347,620	-		AO353_10710	0.66	-0.7
2,347,620	-		AO353_10710	0.66	-0.2
2,347,620	-		AO353_10710	0.66	-1.2
2,347,620	-		AO353_10710	0.66	-2.6
2,347,620	-		AO353_10710	0.66	+0.6
2,347,797	-		AO353_10710	0.80	-1.7
2,347,797	-		AO353_10710	0.80	-3.3
2,347,797	-		AO353_10710	0.80	+0.0
2,347,797	-		AO353_10710	0.80	-2.1