Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10035

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
2,195,601	+		AO353_10030	0.46	+0.8
2,195,601	+		AO353_10030	0.46	+0.3
2,195,601	+		AO353_10030	0.46	+0.2
2,195,601	+		AO353_10030	0.46	+0.9
2,195,601	+		AO353_10030	0.46	+1.4
2,195,601	+		AO353_10030	0.46	+2.2
2,195,601	+		AO353_10030	0.46	+1.1
2,195,601	+		AO353_10030	0.46	+1.0
2,195,601	+		AO353_10030	0.46	-0.6
2,195,601	+		AO353_10030	0.46	+0.4
2,195,601	+		AO353_10030	0.46	+0.1
2,195,602	-		AO353_10030	0.47	+0.6
2,195,602	-		AO353_10030	0.47	+0.3
2,195,602	-		AO353_10030	0.47	-0.7
2,195,602	-		AO353_10030	0.47	-2.0
2,195,602	-		AO353_10030	0.47	+2.5
2,195,602	-		AO353_10030	0.47	+0.0
2,195,602	-		AO353_10030	0.47	-0.8
2,195,602	-		AO353_10030	0.47	+1.6
2,195,660	-		AO353_10030	0.51	-0.1
2,196,082	+		AO353_10030	0.80	-0.2
2,196,118	-		AO353_10030	0.83	+0.4
2,196,264	+				+0.6
2,196,264	+				+0.0
2,196,264	+				+0.4
2,196,264	+				+0.7
2,196,264	+				+1.0
2,196,265	-				+0.6
2,196,305	+				+0.2
2,196,305	+				-1.2
2,196,305	+				+0.4
2,196,305	+				+2.0
2,196,305	+				+1.2
2,196,305	+				+1.9
2,196,305	+				+0.3
2,196,305	+				+1.0
2,196,306	-				-0.1
2,196,306	-				-1.0
2,196,306	-				-0.1
2,196,306	-				-0.4
2,196,315	-				+1.6
2,196,354	-				-0.6
2,196,354	-				+0.4
2,196,417	+				+0.8
2,196,417	+				+0.6
2,196,418	-				+0.6
2,196,501	-				-0.4
2,196,511	-				-0.6
2,196,543	-				+2.5
2,196,613	-				+0.4
2,196,613	-				+0.6
2,196,613	-				+0.4
2,196,620	+				+1.3
2,196,620	+				+0.3
2,196,621	-				+0.6
2,196,621	-				-2.2
2,196,621	-				+0.9
2,196,621	-				+3.2
2,196,621	-				+0.0
2,196,670	-		AO353_10035	0.13	-0.7
2,196,716	+		AO353_10035	0.17	+0.6
2,196,716	+		AO353_10035	0.17	-1.5
2,196,716	+		AO353_10035	0.17	+2.7
2,196,716	+		AO353_10035	0.17	+0.6
2,196,717	-		AO353_10035	0.18	+0.0
2,196,717	-		AO353_10035	0.18	-0.6
2,196,734	+		AO353_10035	0.19	+0.6
2,196,734	+		AO353_10035	0.19	+0.4
2,196,734	+		AO353_10035	0.19	-0.4
2,196,734	+		AO353_10035	0.19	-0.1
2,196,735	-		AO353_10035	0.19	+0.5
2,196,735	-		AO353_10035	0.19	+2.9
2,196,735	-		AO353_10035	0.19	+0.4
2,196,735	-		AO353_10035	0.19	+1.6
2,196,759	+		AO353_10035	0.22	+1.8
2,196,875	+		AO353_10035	0.34	+1.3
2,196,875	+		AO353_10035	0.34	+1.0
2,196,875	+		AO353_10035	0.34	+0.9
2,196,876	-		AO353_10035	0.34	+0.6
2,196,876	-		AO353_10035	0.34	+3.0
2,196,876	-		AO353_10035	0.34	+0.8
2,196,876	-		AO353_10035	0.34	+2.0
2,196,876	-		AO353_10035	0.34	+0.3
2,196,876	-		AO353_10035	0.34	-1.2
2,196,876	-		AO353_10035	0.34	+1.2
2,196,876	-		AO353_10035	0.34	+0.3
2,197,130	+		AO353_10035	0.60	+0.7
2,197,130	+		AO353_10035	0.60	+3.7
2,197,130	+		AO353_10035	0.60	+0.7
2,197,130	+		AO353_10035	0.60	-0.4
2,197,131	-		AO353_10035	0.61	-0.6
2,197,131	-		AO353_10035	0.61	+0.6
2,197,131	-		AO353_10035	0.61	+1.8
2,197,131	-		AO353_10035	0.61	+0.6
2,197,184	+		AO353_10035	0.66	+1.2
2,197,184	+		AO353_10035	0.66	+1.0
2,197,184	+				-0.4
2,197,185	-		AO353_10035	0.66	+0.6
2,197,185	-		AO353_10035	0.66	-0.1
2,197,185	-		AO353_10035	0.66	-0.5
2,197,185	-		AO353_10035	0.66	-1.7
2,197,260	+		AO353_10035	0.74	+0.8
2,197,282	-		AO353_10035	0.76	+0.6
2,197,358	+		AO353_10035	0.84	-0.6
2,197,359	-		AO353_10035	0.84	+0.4
2,197,359	-		AO353_10035	0.84	+0.9
2,197,504	+				-0.8
2,197,504	+				+0.3
2,197,504	+				+1.6
2,197,504	+				-0.4
2,197,504	+				+0.0
2,197,504	+				+1.6
2,197,504	+				-2.0
2,197,504	+				+0.2
2,197,505	-				+1.3
2,197,505	-				+0.5
2,197,505	-				+0.6
2,197,505	-				+0.8
2,197,505	-				+0.5
2,197,505	-				-0.0
2,197,505	-				+0.0
2,197,505	-				+1.4
2,197,505	-				+0.7
2,197,648	+				-0.4
2,197,649	-				+0.0
2,197,698	+				-0.7
2,197,698	+				-0.5
2,197,698	+				+0.0
2,197,698	+				+1.0
2,197,698	+				+0.5
2,197,698	+				+0.7
2,197,699	-				+0.5
2,197,734	+				-1.0
2,197,735	-				+0.5
2,197,735	-				+0.8
2,197,735	-				+0.4
2,197,885	+				-0.4
2,197,913	+				-2.0
2,197,913	+				+1.0
2,197,914	-				+0.0
2,198,059	+		AO353_10040	0.19	+1.3
2,198,059	+		AO353_10040	0.19	-0.2
2,198,060	-		AO353_10040	0.19	+1.6
2,198,060	-		AO353_10040	0.19	+0.0
2,198,060	-		AO353_10040	0.19	-1.3
2,198,060	-		AO353_10040	0.19	+0.0
2,198,060	-		AO353_10040	0.19	+0.8
2,198,061	+		AO353_10040	0.19	-1.4
2,198,061	+		AO353_10040	0.19	-1.6
2,198,061	+		AO353_10040	0.19	+0.2
2,198,061	+		AO353_10040	0.19	-0.7
2,198,061	+		AO353_10040	0.19	-0.8
2,198,061	+		AO353_10040	0.19	+2.0
2,198,061	+		AO353_10040	0.19	+0.0
2,198,061	+		AO353_10040	0.19	+0.0
2,198,061	+		AO353_10040	0.19	+1.6
2,198,061	+		AO353_10040	0.19	+0.3
2,198,061	+		AO353_10040	0.19	-1.2
2,198,061	+		AO353_10040	0.19	+0.4
2,198,061	+		AO353_10040	0.19	+0.4
2,198,061	+		AO353_10040	0.19	+1.1
2,198,061	+		AO353_10040	0.19	+0.0
2,198,061	+		AO353_10040	0.19	+0.0
2,198,061	+		AO353_10040	0.19	+1.0
2,198,061	+		AO353_10040	0.19	+1.2
2,198,061	+		AO353_10040	0.19	+2.0
2,198,061	+		AO353_10040	0.19	+0.1
2,198,061	+		AO353_10040	0.19	-0.7
2,198,061	+		AO353_10040	0.19	+0.3
2,198,062	-		AO353_10040	0.19	+0.8
2,198,062	-		AO353_10040	0.19	+1.6
2,198,062	-		AO353_10040	0.19	+0.6
2,198,062	-		AO353_10040	0.19	+0.0
2,198,062	-		AO353_10040	0.19	+0.2
2,198,062	-		AO353_10040	0.19	+1.0
2,198,062	-		AO353_10040	0.19	+1.1
2,198,062	-		AO353_10040	0.19	+0.0
2,198,062	-		AO353_10040	0.19	+0.2
2,198,062	-		AO353_10040	0.19	+0.2
2,198,062	-		AO353_10040	0.19	+0.4
2,198,062	-		AO353_10040	0.19	-0.4
2,198,062	-		AO353_10040	0.19	-2.0
2,198,062	-		AO353_10040	0.19	+2.0
2,198,062	-		AO353_10040	0.19	-0.4
2,198,062	-		AO353_10040	0.19	+1.3
2,198,062	-		AO353_10040	0.19	-0.7
2,198,062	-		AO353_10040	0.19	-0.2
2,198,062	-		AO353_10040	0.19	+1.3
2,198,062	-		AO353_10040	0.19	-0.7
2,198,062	-		AO353_10040	0.19	-0.2
2,198,062	-		AO353_10040	0.19	+1.9
2,198,062	-		AO353_10040	0.19	+0.6
2,198,062	-		AO353_10040	0.19	-0.4
2,198,317	+		AO353_10040	0.49	+0.3
2,198,317	+		AO353_10040	0.49	+0.8
2,198,318	-		AO353_10040	0.49	+0.0
2,198,318	-		AO353_10040	0.49	-0.4
2,198,361	+		AO353_10040	0.54	-0.4
2,198,361	+		AO353_10040	0.54	+2.6
2,198,362	-		AO353_10040	0.54	+0.9
2,198,362	-		AO353_10040	0.54	+0.2
2,198,362	-		AO353_10040	0.54	+0.3
2,198,362	-		AO353_10040	0.54	+0.6
2,198,481	+		AO353_10040	0.68	+2.4
2,198,481	+		AO353_10040	0.68	+2.0
2,198,481	+		AO353_10040	0.68	+0.6