Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08465

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
1,859,668	+				+1.8
1,859,668	+				+1.6
1,859,674	+				+0.2
1,859,674	+				-0.3
1,859,674	+				-0.8
1,859,782	+		AO353_08460	0.10	-0.4
1,859,782	+		AO353_08460	0.10	-1.8
1,859,782	+		AO353_08460	0.10	+0.8
1,859,782	+		AO353_08460	0.10	+1.7
1,859,782	+		AO353_08460	0.10	-0.1
1,859,783	-		AO353_08460	0.10	-0.3
1,859,783	-		AO353_08460	0.10	+0.9
1,859,783	-		AO353_08460	0.10	-0.5
1,859,783	-		AO353_08460	0.10	+0.5
1,859,833	+		AO353_08460	0.17	-0.0
1,859,833	+		AO353_08460	0.17	-0.9
1,859,833	+		AO353_08460	0.17	+0.3
1,859,834	-		AO353_08460	0.17	+0.5
1,859,834	-		AO353_08460	0.17	+0.6
1,859,834	-		AO353_08460	0.17	-0.4
1,859,998	+		AO353_08460	0.39	+0.4
1,859,998	+		AO353_08460	0.39	+0.8
1,859,998	+		AO353_08460	0.39	+0.8
1,859,998	+		AO353_08460	0.39	-0.3
1,859,998	+		AO353_08460	0.39	+0.9
1,859,998	+		AO353_08460	0.39	-0.6
1,859,999	-		AO353_08460	0.39	-0.7
1,859,999	-		AO353_08460	0.39	+0.4
1,859,999	-		AO353_08460	0.39	+0.7
1,859,999	-		AO353_08460	0.39	-1.0
1,860,031	+		AO353_08460	0.43	+0.3
1,860,031	+		AO353_08460	0.43	-0.2
1,860,031	+		AO353_08460	0.43	-1.1
1,860,032	-		AO353_08460	0.44	+0.8
1,860,032	-		AO353_08460	0.44	-0.3
1,860,032	-		AO353_08460	0.44	-0.7
1,860,032	-		AO353_08460	0.44	-1.4
1,860,043	-		AO353_08460	0.45	-0.3
1,860,079	+		AO353_08460	0.50	+1.5
1,860,080	-		AO353_08460	0.50	-0.1
1,860,080	-		AO353_08460	0.50	-0.1
1,860,080	-		AO353_08460	0.50	-0.3
1,860,080	-		AO353_08460	0.50	-0.8
1,860,080	-		AO353_08460	0.50	-3.5
1,860,124	+		AO353_08460	0.56	+0.1
1,860,124	+		AO353_08460	0.56	+0.5
1,860,124	+		AO353_08460	0.56	+1.1
1,860,124	+		AO353_08460	0.56	+0.5
1,860,124	+		AO353_08460	0.56	-0.2
1,860,124	+		AO353_08460	0.56	-1.0
1,860,124	+		AO353_08460	0.56	+0.7
1,860,124	+		AO353_08460	0.56	+1.2
1,860,124	+		AO353_08460	0.56	+1.9
1,860,124	+		AO353_08460	0.56	+0.2
1,860,124	+		AO353_08460	0.56	-1.3
1,860,124	+		AO353_08460	0.56	-1.3
1,860,125	-		AO353_08460	0.56	+1.5
1,860,125	-		AO353_08460	0.56	-0.7
1,860,125	-		AO353_08460	0.56	-0.6
1,860,125	-		AO353_08460	0.56	+1.3
1,860,125	-		AO353_08460	0.56	-1.5
1,860,125	-		AO353_08460	0.56	-1.8
1,860,125	-		AO353_08460	0.56	-0.3
1,860,125	-		AO353_08460	0.56	+0.5
1,860,125	-		AO353_08460	0.56	+1.5
1,860,125	-		AO353_08460	0.56	-0.1
1,860,224	+		AO353_08460	0.69	+0.9
1,860,224	+		AO353_08460	0.69	-0.3
1,860,236	+		AO353_08460	0.71	+0.2
1,860,236	+		AO353_08460	0.71	+0.7
1,860,237	-		AO353_08460	0.71	-2.1
1,860,305	+		AO353_08460	0.80	+0.3
1,860,305	+		AO353_08460	0.80	+0.9
1,860,305	+		AO353_08460	0.80	-0.8
1,860,306	-		AO353_08460	0.80	+1.9
1,860,306	-		AO353_08460	0.80	+0.9
1,860,306	-		AO353_08460	0.80	-0.1
1,860,337	+		AO353_08460	0.84	+0.1
1,860,337	+		AO353_08460	0.84	-1.4
1,860,337	+		AO353_08460	0.84	+0.5
1,860,337	+		AO353_08460	0.84	+0.2
1,860,337	+		AO353_08460	0.84	+1.5
1,860,337	+		AO353_08460	0.84	-0.1
1,860,337	+		AO353_08460	0.84	-0.3
1,860,337	+		AO353_08460	0.84	-0.3
1,860,337	+		AO353_08460	0.84	+2.3
1,860,337	+		AO353_08460	0.84	-1.1
1,860,337	+		AO353_08460	0.84	-0.4
1,860,337	+		AO353_08460	0.84	+0.2
1,860,337	+		AO353_08460	0.84	-0.1
1,860,337	+		AO353_08460	0.84	+1.2
1,860,337	+		AO353_08460	0.84	+0.1
1,860,337	+		AO353_08460	0.84	-0.4
1,860,337	+		AO353_08460	0.84	+1.5
1,860,337	+		AO353_08460	0.84	-0.5
1,860,337	+		AO353_08460	0.84	+0.1
1,860,337	+		AO353_08460	0.84	+1.5
1,860,337	+		AO353_08460	0.84	+0.1
1,860,337	+		AO353_08460	0.84	+1.1
1,860,338	-		AO353_08460	0.84	+0.3
1,860,338	-		AO353_08460	0.84	-0.1
1,860,338	-		AO353_08460	0.84	-0.1
1,860,338	-		AO353_08460	0.84	-2.1
1,860,338	-		AO353_08460	0.84	+1.9
1,860,338	-		AO353_08460	0.84	+0.1
1,860,338	-		AO353_08460	0.84	-0.4
1,860,338	-		AO353_08460	0.84	+0.4
1,860,338	-		AO353_08460	0.84	+0.9
1,860,338	-		AO353_08460	0.84	+1.3
1,860,338	-		AO353_08460	0.84	-0.6
1,860,338	-		AO353_08460	0.84	+0.2
1,860,338	-		AO353_08460	0.84	-0.8
1,860,338	-		AO353_08460	0.84	+0.9
1,860,338	-		AO353_08460	0.84	-0.4
1,860,338	-		AO353_08460	0.84	-0.5
1,860,338	-		AO353_08460	0.84	-0.1
1,860,338	-		AO353_08460	0.84	+0.2
1,860,338	-		AO353_08460	0.84	+1.6
1,860,338	-		AO353_08460	0.84	+3.1
1,860,338	-		AO353_08460	0.84	-1.3
1,860,338	-		AO353_08460	0.84	-0.1
1,860,338	-		AO353_08460	0.84	-2.1
1,860,338	-		AO353_08460	0.84	-1.0
1,860,338	-		AO353_08460	0.84	-3.5
1,860,365	+		AO353_08460	0.88	+1.5
1,860,365	+		AO353_08460	0.88	+0.2
1,860,366	-		AO353_08460	0.88	+1.7
1,860,390	+				-1.7
1,860,390	+				+0.4
1,860,390	+				+1.2
1,860,390	+				+3.0
1,860,390	+				+1.1
1,860,390	+				+0.2
1,860,390	+				+0.5
1,860,391	-				-1.3
1,860,451	+				+0.8
1,860,538	+				+0.5
1,860,538	+				+2.2
1,860,538	+				+0.6
1,860,538	+				+0.5
1,860,538	+				+0.7
1,860,539	-				+0.3
1,860,539	-				+0.3
1,860,886	+		AO353_08465	0.11	+5.3
1,860,886	+		AO353_08465	0.11	+3.5
1,860,886	+		AO353_08465	0.11	+3.9
1,860,886	+		AO353_08465	0.11	+3.5
1,860,886	+		AO353_08465	0.11	+3.3
1,860,887	-		AO353_08465	0.11	+2.1
1,860,887	-		AO353_08465	0.11	+3.7
1,860,887	-		AO353_08465	0.11	-0.1
1,860,887	-		AO353_08465	0.11	+3.2
1,860,960	+		AO353_08465	0.15	+3.1
1,860,960	+		AO353_08465	0.15	+4.2
1,860,960	+		AO353_08465	0.15	+3.0
1,860,961	-		AO353_08465	0.15	+4.0
1,860,961	-		AO353_08465	0.15	+2.6
1,860,961	-		AO353_08465	0.15	+3.3
1,860,961	-		AO353_08465	0.15	+3.1
1,860,961	-		AO353_08465	0.15	+4.3
1,860,961	-		AO353_08465	0.15	+3.8
1,860,966	+		AO353_08465	0.15	+2.6
1,860,967	-		AO353_08465	0.15	+3.3
1,860,992	-		AO353_08465	0.16	+3.4
1,860,992	-		AO353_08465	0.16	+3.6
1,861,011	+		AO353_08465	0.17	+2.5
1,861,011	+		AO353_08465	0.17	+4.0
1,861,011	+		AO353_08465	0.17	+3.8
1,861,012	-		AO353_08465	0.17	+3.3
1,861,012	-		AO353_08465	0.17	+3.4
1,861,077	+		AO353_08465	0.20	+3.3
1,861,077	+		AO353_08465	0.20	+2.9
1,861,077	+		AO353_08465	0.20	+3.1
1,861,077	+		AO353_08465	0.20	+1.2
1,861,077	+		AO353_08465	0.20	+2.9
1,861,078	-		AO353_08465	0.20	+2.4
1,861,078	-		AO353_08465	0.20	+2.6
1,861,272	-		AO353_08465	0.28	+2.7
1,861,272	-		AO353_08465	0.28	+3.1
1,861,272	-		AO353_08465	0.28	-0.3
1,861,353	+		AO353_08465	0.32	+3.4
1,861,353	+		AO353_08465	0.32	+3.4
1,861,353	+		AO353_08465	0.32	+3.8
1,861,353	+		AO353_08465	0.32	+3.8
1,861,353	+		AO353_08465	0.32	+4.0
1,861,353	+		AO353_08465	0.32	+2.8
1,861,354	-		AO353_08465	0.32	+3.4
1,861,354	-		AO353_08465	0.32	+1.6
1,861,354	-		AO353_08465	0.32	+3.6
1,861,354	-		AO353_08465	0.32	+3.9
1,861,354	-		AO353_08465	0.32	+3.3
1,861,354	-		AO353_08465	0.32	+3.1
1,861,354	-		AO353_08465	0.32	+3.6
1,861,434	+		AO353_08465	0.35	+3.4
1,861,435	-		AO353_08465	0.35	+3.9
1,861,501	-				+3.1
1,861,701	+		AO353_08465	0.47	+4.4
1,861,701	+		AO353_08465	0.47	+3.6
1,861,701	+		AO353_08465	0.47	+3.4
1,861,701	+		AO353_08465	0.47	+2.8
1,861,701	+		AO353_08465	0.47	+3.7
1,861,701	+		AO353_08465	0.47	+3.3
1,861,701	+		AO353_08465	0.47	+3.3
1,861,701	+		AO353_08465	0.47	+1.8
1,861,702	-		AO353_08465	0.47	+3.7
1,861,702	-		AO353_08465	0.47	+3.9
1,861,702	-		AO353_08465	0.47	+3.6
1,861,717	-		AO353_08465	0.48	+3.1
1,861,756	-				+2.8
1,861,929	+		AO353_08465	0.57	+3.8
1,861,929	+		AO353_08465	0.57	+3.6
1,861,929	+		AO353_08465	0.57	+4.0
1,861,962	+		AO353_08465	0.59	+3.7
1,861,962	+		AO353_08465	0.59	+3.5
1,861,962	+		AO353_08465	0.59	+4.2
1,861,962	+		AO353_08465	0.59	+3.1
1,861,962	+		AO353_08465	0.59	+2.2
1,861,963	-		AO353_08465	0.59	+3.8
1,861,963	-		AO353_08465	0.59	+3.5
1,861,963	-		AO353_08465	0.59	+2.9
1,861,963	-		AO353_08465	0.59	+3.4
1,861,963	-		AO353_08465	0.59	+2.9
1,861,963	-		AO353_08465	0.59	+3.5
1,861,963	-		AO353_08465	0.59	+3.1
1,861,963	-		AO353_08465	0.59	+3.8
1,862,016	+		AO353_08465	0.61	+3.4
1,862,016	+		AO353_08465	0.61	+3.2
1,862,016	+		AO353_08465	0.61	+3.5
1,862,017	-		AO353_08465	0.61	+2.8
1,862,017	-		AO353_08465	0.61	+0.9
1,862,151	+		AO353_08465	0.67	+4.1
1,862,151	+		AO353_08465	0.67	+3.4
1,862,151	+		AO353_08465	0.67	+4.6
1,862,152	-		AO353_08465	0.67	+4.8
1,862,152	-		AO353_08465	0.67	+2.5
1,862,152	-		AO353_08465	0.67	+3.9
1,862,152	-		AO353_08465	0.67	+3.0
1,862,152	-		AO353_08465	0.67	-1.1
1,862,152	-		AO353_08465	0.67	+2.7
1,862,152	-		AO353_08465	0.67	+3.9
1,862,281	+		AO353_08465	0.73	+3.3
1,862,282	-		AO353_08465	0.73	+4.3
1,862,586	+		AO353_08465	0.86	+3.5
1,862,587	-		AO353_08465	0.86	+2.7
1,862,613	+		AO353_08465	0.87	+3.9
1,862,613	+		AO353_08465	0.87	+2.1
1,862,614	-		AO353_08465	0.87	+3.4
1,862,784	+				+3.7
1,862,784	+				+3.3
1,862,785	-				+2.7
1,862,785	-				+3.2
1,862,785	-				+2.8
1,862,833	+				+3.4
1,862,833	+				+3.0
1,862,834	-				+3.1
1,862,834	-				+3.1
1,862,834	-				+3.6
1,862,834	-				+3.6
1,862,834	-				+2.9
1,862,869	+				+3.2
1,862,869	+				+1.7
1,862,870	-				+2.7
1,862,870	-				+2.0
1,862,896	+				+3.0
1,862,896	+				+2.8
1,862,896	+				+3.6
1,862,896	+				+3.0
1,862,897	-				+3.7
1,862,897	-				+2.8
1,862,897	-				+5.2
1,862,897	-				+1.2
1,862,897	-				+2.7
1,862,897	-				+3.5
1,862,940	+				+1.5
1,862,940	+				+3.2
1,862,941	-				+1.2
1,863,022	+		AO353_08470	0.20	+2.1
1,863,022	+		AO353_08470	0.20	+1.8
1,863,022	+		AO353_08470	0.20	+1.6
1,863,022	+		AO353_08470	0.20	+0.4
1,863,022	+		AO353_08470	0.20	+2.6
1,863,023	-		AO353_08470	0.20	-0.8
1,863,056	+		AO353_08470	0.27	+2.8
1,863,057	-		AO353_08470	0.27	-0.1
1,863,256	+		AO353_08470	0.68	+1.5
1,863,257	-		AO353_08470	0.69	-1.1
1,863,290	+		AO353_08470	0.75	+0.8
1,863,291	-		AO353_08470	0.76	-1.3
1,863,478	+				+2.2
1,863,478	+				-2.0
1,863,478	+				+3.3
1,863,478	+				-0.4
1,863,478	+				+0.9
1,863,478	+				+1.3
1,863,478	+				-0.3
1,863,478	+				+1.0
1,863,479	-				-1.2
1,863,479	-				-1.0
1,863,479	-				-1.7
1,863,479	-				+0.1
1,863,479	-				-2.2
1,863,479	-				-1.7
1,863,479	-				-1.7
1,863,479	-				-0.1
1,863,479	-				+0.4
1,863,483	+				+0.6
1,863,483	+				+0.4
1,863,483	+				+1.5
1,863,483	+				+0.9
1,863,484	-				-1.5
1,863,508	+				+1.0
1,863,508	+				+2.5
1,863,509	-				-1.1
1,863,526	-				-1.8
1,863,565	+				+1.4
1,863,566	-				-1.2
1,863,621	+		AO353_08475	0.11	+0.9
1,863,621	+		AO353_08475	0.11	-0.7
1,863,621	+		AO353_08475	0.11	-1.8
1,863,621	+		AO353_08475	0.11	+1.1
1,863,621	+		AO353_08475	0.11	+1.0
1,863,621	+		AO353_08475	0.11	+0.2
1,863,621	+		AO353_08475	0.11	-0.2
1,863,621	+		AO353_08475	0.11	+1.0
1,863,621	+		AO353_08475	0.11	+0.5
1,863,622	-		AO353_08475	0.11	-0.5
1,863,657	+		AO353_08475	0.16	-1.1
1,863,658	-		AO353_08475	0.16	-2.1
1,863,681	+		AO353_08475	0.20	+0.5
1,863,682	-		AO353_08475	0.20	-1.7
1,863,690	+		AO353_08475	0.21	+1.1
1,863,690	+		AO353_08475	0.21	-1.2
1,863,690	+		AO353_08475	0.21	-0.3
1,863,690	+		AO353_08475	0.21	+1.2
1,863,690	+		AO353_08475	0.21	+1.2
1,863,691	-		AO353_08475	0.21	-0.1
1,863,691	-		AO353_08475	0.21	-2.8
1,863,691	-		AO353_08475	0.21	-1.5
1,863,691	-		AO353_08475	0.21	-1.1
1,863,720	+		AO353_08475	0.26	-0.1
1,863,720	+		AO353_08475	0.26	+0.3
1,863,789	+		AO353_08475	0.36	+1.1
1,863,789	+		AO353_08475	0.36	+0.9
1,863,789	+		AO353_08475	0.36	+0.3
1,863,789	+		AO353_08475	0.36	-0.1
1,863,789	+		AO353_08475	0.36	-0.1
1,863,789	+		AO353_08475	0.36	+2.7
1,863,789	+		AO353_08475	0.36	+1.9
1,863,790	-		AO353_08475	0.36	+0.7
1,863,790	-		AO353_08475	0.36	-0.9
1,863,790	-		AO353_08475	0.36	-0.1
1,863,790	-		AO353_08475	0.36	-1.2
1,863,790	-		AO353_08475	0.36	-1.4