Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07595

Experiment: Gentamicin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.006 mg/ml
1,673,099	+		AO353_07590	0.37	-0.8
1,673,100	-		AO353_07590	0.38	+1.4
1,673,212	+		AO353_07590	0.45	+0.8
1,673,212	+		AO353_07590	0.45	+0.8
1,673,212	+		AO353_07590	0.45	+0.6
1,673,213	-				+1.4
1,673,213	-		AO353_07590	0.45	+0.6
1,673,213	-		AO353_07590	0.45	-0.2
1,673,213	-		AO353_07590	0.45	+0.4
1,673,213	-		AO353_07590	0.45	+0.8
1,673,213	-		AO353_07590	0.45	-0.8
1,673,213	-		AO353_07590	0.45	+0.1
1,673,213	-		AO353_07590	0.45	+0.2
1,673,224	+		AO353_07590	0.46	+1.2
1,673,224	+		AO353_07590	0.46	-0.7
1,673,224	+		AO353_07590	0.46	-0.6
1,673,224	+		AO353_07590	0.46	+0.4
1,673,225	-		AO353_07590	0.46	-0.0
1,673,225	-		AO353_07590	0.46	-0.3
1,673,225	-		AO353_07590	0.46	-0.8
1,673,225	-		AO353_07590	0.46	+1.2
1,673,225	-		AO353_07590	0.46	+0.5
1,673,428	+		AO353_07590	0.61	+0.4
1,673,429	-		AO353_07590	0.61	+0.0
1,673,461	+		AO353_07590	0.63	+0.7
1,673,461	+		AO353_07590	0.63	-0.8
1,673,461	+		AO353_07590	0.63	-1.0
1,673,461	+		AO353_07590	0.63	-0.2
1,673,461	+		AO353_07590	0.63	+0.8
1,673,461	+		AO353_07590	0.63	+0.1
1,673,461	+		AO353_07590	0.63	+0.6
1,673,462	-		AO353_07590	0.63	-0.4
1,673,462	-		AO353_07590	0.63	-0.6
1,673,596	+		AO353_07590	0.72	-0.1
1,673,596	+		AO353_07590	0.72	-1.0
1,673,596	+		AO353_07590	0.72	-0.6
1,673,617	+		AO353_07590	0.74	+0.5
1,673,617	+		AO353_07590	0.74	+1.3
1,673,617	+		AO353_07590	0.74	+0.6
1,673,617	+		AO353_07590	0.74	+1.7
1,673,617	+		AO353_07590	0.74	+0.2
1,673,617	+		AO353_07590	0.74	-1.2
1,673,618	-		AO353_07590	0.74	-0.3
1,673,618	-		AO353_07590	0.74	+0.2
1,673,618	-		AO353_07590	0.74	+0.1
1,673,618	-		AO353_07590	0.74	+1.0
1,673,618	-		AO353_07590	0.74	+0.4
1,673,618	-		AO353_07590	0.74	+0.1
1,673,618	-		AO353_07590	0.74	+0.1
1,673,639	-		AO353_07590	0.75	+0.3
1,673,639	-		AO353_07590	0.75	-0.2
1,673,639	-		AO353_07590	0.75	+0.2
1,673,656	-		AO353_07590	0.77	+0.2
1,673,701	+		AO353_07590	0.80	-1.2
1,673,701	+		AO353_07590	0.80	-0.0
1,673,701	+		AO353_07590	0.80	-1.3
1,673,701	+		AO353_07590	0.80	-0.3
1,673,701	+		AO353_07590	0.80	-0.2
1,673,701	+		AO353_07590	0.80	-1.9
1,673,702	-		AO353_07590	0.80	-0.4
1,673,702	-		AO353_07590	0.80	-0.2
1,673,702	-		AO353_07590	0.80	-1.6
1,673,702	-		AO353_07590	0.80	-0.4
1,673,702	-		AO353_07590	0.80	-0.6
1,673,702	-		AO353_07590	0.80	-0.8
1,673,702	-		AO353_07590	0.80	-1.3
1,673,705	+		AO353_07590	0.80	-0.2
1,673,705	+		AO353_07590	0.80	-0.2
1,673,705	+		AO353_07590	0.80	-0.3
1,673,705	+		AO353_07590	0.80	-0.8
1,673,705	+		AO353_07590	0.80	-1.5
1,673,705	+		AO353_07590	0.80	+0.3
1,673,706	-		AO353_07590	0.80	-0.3
1,673,706	-		AO353_07590	0.80	+0.0
1,673,706	-		AO353_07590	0.80	+3.0
1,673,929	+				-0.2
1,673,930	-				+0.8
1,673,952	+				-0.7
1,673,952	+				-0.0
1,673,952	+				+0.3
1,673,952	+				+0.4
1,673,952	+				+0.4
1,673,952	+				+1.1
1,673,952	+				+0.3
1,673,952	+				-1.9
1,673,952	+				+0.9
1,673,952	+				-1.1
1,673,952	+				-0.4
1,673,953	-				+1.0
1,673,953	-				-0.9
1,673,953	-				-0.2
1,673,953	-				-1.2
1,673,953	-				-0.5
1,673,953	-				+0.5
1,673,953	-				-1.2
1,673,953	-				-1.3
1,673,953	-				+1.0
1,673,953	-				-0.2
1,673,953	-				-0.7
1,673,953	-				-0.5
1,673,956	+				-0.5
1,673,956	+				+0.0
1,673,956	+				-0.2
1,673,956	+				+1.4
1,673,956	+				+1.8
1,673,956	+				+0.6
1,673,956	+				+1.0
1,673,956	+				-0.4
1,673,956	+				+0.4
1,673,956	+				-0.9
1,673,956	+				-0.4
1,673,957	-				+0.5
1,673,957	-				-1.5
1,673,957	-				+0.4
1,673,957	-				-1.4
1,673,957	-				+1.1
1,673,957	-				+0.4
1,673,957	-				+2.4
1,673,957	-				-1.7
1,673,957	-				+1.6
1,673,957	-				-0.6
1,673,957	-				+0.3
1,673,957	-				-0.4
1,673,957	-				+0.7
1,673,957	-				-0.5
1,673,957	-				-0.9
1,673,992	+				+0.4
1,673,992	+				-1.0
1,673,992	+				-2.3
1,673,992	+				+0.3
1,673,992	+				+0.1
1,673,993	-				-0.7
1,673,993	-				+0.8
1,673,993	-				+0.9
1,673,993	-				+0.6
1,673,993	-				-0.3
1,673,993	-				+0.8
1,674,006	+				-2.5
1,674,006	+				+1.4
1,674,006	+				+1.0
1,674,006	+				-0.2
1,674,006	+				-0.2
1,674,006	+				+0.7
1,674,006	+				+0.7
1,674,007	-				+0.6
1,674,007	-				+0.6
1,674,007	-				+0.3
1,674,375	+		AO353_07595	0.57	+0.7
1,674,375	+		AO353_07595	0.57	+0.6
1,674,375	+		AO353_07595	0.57	+0.8
1,674,375	+		AO353_07595	0.57	-0.6
1,674,375	+		AO353_07595	0.57	+0.6
1,674,376	-		AO353_07595	0.57	+1.0
1,674,376	-		AO353_07595	0.57	-0.9
1,674,376	-		AO353_07595	0.57	-0.2
1,674,475	+		AO353_07595	0.72	-0.1
1,674,475	+		AO353_07595	0.72	+0.0
1,674,476	-		AO353_07595	0.72	+2.5
1,674,476	-		AO353_07595	0.72	+1.2
1,674,623	-				-0.5
1,674,658	+				+2.2
1,674,658	+				-2.4
1,674,687	+				+0.8
1,674,687	+				+0.8
1,674,687	+				+0.0
1,674,688	-				-0.2
1,674,688	-				+0.6
1,674,688	-				-0.1
1,674,688	-				+0.7
1,674,688	-				-1.0
1,674,688	-				-0.2
1,674,688	-				+0.0
1,674,741	+				-0.0
1,674,741	+				-0.2
1,674,790	+		AO353_07600	0.12	+0.6
1,674,790	+		AO353_07600	0.12	-0.2
1,674,790	+		AO353_07600	0.12	+0.2
1,674,791	-		AO353_07600	0.13	+1.0
1,674,791	-		AO353_07600	0.13	-0.8
1,674,791	-		AO353_07600	0.13	+0.8
1,674,791	-		AO353_07600	0.13	+1.4
1,674,791	-		AO353_07600	0.13	-0.7
1,674,791	-		AO353_07600	0.13	+1.0
1,674,791	-		AO353_07600	0.13	+0.4
1,674,791	-		AO353_07600	0.13	+0.5
1,674,818	+		AO353_07600	0.18	+0.8
1,675,148	+		AO353_07600	0.84	-0.2
1,675,148	+		AO353_07600	0.84	+1.4
1,675,148	+		AO353_07600	0.84	+0.4
1,675,148	+		AO353_07600	0.84	-0.2
1,675,148	+				+0.4
1,675,149	-		AO353_07600	0.84	+0.3
1,675,149	-		AO353_07600	0.84	+0.6
1,675,149	-		AO353_07600	0.84	+0.8
1,675,149	-		AO353_07600	0.84	+2.2
1,675,149	-		AO353_07600	0.84	+1.4
1,675,149	-		AO353_07600	0.84	-1.3
1,675,155	-		AO353_07600	0.85	+1.4
1,675,163	+		AO353_07600	0.87	-1.2
1,675,163	+		AO353_07600	0.87	+1.3
1,675,164	-		AO353_07600	0.87	+1.4
1,675,232	+				-0.1
1,675,232	+				+0.6
1,675,232	+				+0.2
1,675,232	+				+0.8
1,675,232	+				+0.8
1,675,232	+				+0.9
1,675,232	+				+0.8
1,675,232	+				-0.2
1,675,233	-				-0.6
1,675,233	-				-0.9
1,675,233	-				+0.4
1,675,233	-				+1.2
1,675,233	-				+0.2
1,675,250	+				+0.5
1,675,250	+				-1.8
1,675,250	+				+0.8
1,675,250	+				+1.4
1,675,251	-				-0.4
1,675,266	+				-0.3
1,675,279	+				-0.9
1,675,279	+				+1.0
1,675,279	+				-0.6
1,675,279	+				-0.6
1,675,279	+				+0.4
1,675,280	-				+0.1
1,675,280	-				+0.4
1,675,280	-				+0.0
1,675,280	-				-1.2
1,675,280	-				-0.6
1,675,280	-				+0.7
1,675,357	+				+0.6
1,675,358	-				-0.1
1,675,358	-				+0.7
1,675,379	+				+0.1
1,675,379	+				-2.2
1,675,380	-				-2.3
1,675,380	-				-0.5
1,675,380	-				-0.9
1,675,380	-				-1.4
1,675,380	-				+0.2
1,675,388	+				-0.8
1,675,388	+				-0.9
1,675,388	+				+0.6
1,675,388	+				+0.1
1,675,388	+				+0.1
1,675,388	+				-0.2
1,675,388	+				+0.4
1,675,388	+				+1.4
1,675,388	+				-1.0
1,675,389	-				-0.6
1,675,389	-				+2.4
1,675,389	-				-1.2
1,675,389	-				-0.9
1,675,389	-				+0.6
1,675,389	-				-2.0
1,675,389	-				-0.4
1,675,392	+				+1.7
1,675,392	+				+0.4
1,675,393	-				+0.4
1,675,393	-				+0.3
1,675,393	-				-2.2
1,675,393	-				-0.0
1,675,393	-				-1.7
1,675,393	-				-0.4
1,675,393	-				+0.8
1,675,436	+				-1.9
1,675,436	+				+0.7
1,675,437	-				-0.6
1,675,437	-				-1.4
1,675,437	-				+0.7
1,675,437	-				-1.1
1,675,497	-		AO353_07605	0.11	-1.6
1,675,642	+		AO353_07605	0.27	+0.4
1,675,642	+		AO353_07605	0.27	-0.2
1,675,642	+		AO353_07605	0.27	-0.4
1,675,642	+		AO353_07605	0.27	+0.5
1,675,643	-		AO353_07605	0.27	+1.4
1,675,643	-		AO353_07605	0.27	-0.6
1,675,643	-		AO353_07605	0.27	+1.2
1,675,643	-		AO353_07605	0.27	+2.0
1,675,643	-		AO353_07605	0.27	-0.6