Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05534 and H281DRAFT_05535 overlap by 7 nucleotides H281DRAFT_05535 and H281DRAFT_05536 are separated by 8 nucleotides H281DRAFT_05536 and H281DRAFT_05537 overlap by 4 nucleotides
H281DRAFT_05534: H281DRAFT_05534 - Zn-dependent dipeptidase, dipeptidase homolog, at 118,847 to 119,812
_05534
H281DRAFT_05535: H281DRAFT_05535 - YD repeat-containing protein, at 119,806 to 120,549
_05535
H281DRAFT_05536: H281DRAFT_05536 - hypothetical protein, at 120,558 to 122,282
_05536
H281DRAFT_05537: H281DRAFT_05537 - transcriptional regulator, IclR family, at 122,279 to 123,001
_05537
Position (kb) 120
121
122
123 Strain fitness (log2 ratio) -1
0
1
2
3 at 119.641 kb on + strand, within H281DRAFT_05534 at 119.873 kb on + strand at 119.970 kb on - strand, within H281DRAFT_05535 at 120.147 kb on - strand, within H281DRAFT_05535 at 120.301 kb on - strand, within H281DRAFT_05535 at 120.301 kb on - strand, within H281DRAFT_05535 at 120.505 kb on + strand at 120.721 kb on - strand at 120.985 kb on + strand, within H281DRAFT_05536 at 120.986 kb on - strand, within H281DRAFT_05536 at 121.293 kb on + strand, within H281DRAFT_05536 at 121.753 kb on + strand, within H281DRAFT_05536 at 121.754 kb on - strand, within H281DRAFT_05536 at 122.562 kb on + strand, within H281DRAFT_05537 at 123.001 kb on + strand at 123.002 kb on - strand at 123.053 kb on - strand at 123.059 kb on + strand at 123.060 kb on - strand at 123.060 kb on - strand at 123.241 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) remove 119,641 + H281DRAFT_05534 0.82 +1.0 119,873 + -0.7 119,970 - H281DRAFT_05535 0.22 +0.8 120,147 - H281DRAFT_05535 0.46 +0.7 120,301 - H281DRAFT_05535 0.67 -1.5 120,301 - H281DRAFT_05535 0.67 +0.3 120,505 + -0.2 120,721 - +2.3 120,985 + H281DRAFT_05536 0.25 +0.2 120,986 - H281DRAFT_05536 0.25 +1.4 121,293 + H281DRAFT_05536 0.43 +0.6 121,753 + H281DRAFT_05536 0.69 +0.9 121,754 - H281DRAFT_05536 0.69 +1.2 122,562 + H281DRAFT_05537 0.39 +0.6 123,001 + -1.1 123,002 - +0.1 123,053 - -1.0 123,059 + -0.1 123,060 - +3.0 123,060 - +0.2 123,241 - +0.8
Or see this region's nucleotide sequence