Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03595

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03594 and H281DRAFT_03595 are separated by 24 nucleotidesH281DRAFT_03595 and H281DRAFT_03596 are separated by 91 nucleotides H281DRAFT_03594: H281DRAFT_03594 - ParB family protein, at 103,667 to 104,725 _03594 H281DRAFT_03595: H281DRAFT_03595 - plasmid segregation oscillating ATPase ParF, at 104,750 to 105,412 _03595 H281DRAFT_03596: H281DRAFT_03596 - hypothetical protein, at 105,504 to 106,133 _03596 Position (kb) 104 105 106Strain fitness (log2 ratio) -1 0 1at 104.738 kb on - strandat 105.523 kb on + strandat 105.671 kb on + strand, within H281DRAFT_03596at 105.671 kb on + strand, within H281DRAFT_03596at 105.671 kb on + strand, within H281DRAFT_03596at 105.671 kb on + strand, within H281DRAFT_03596at 105.672 kb on - strand, within H281DRAFT_03596at 105.672 kb on - strand, within H281DRAFT_03596at 105.672 kb on - strand, within H281DRAFT_03596at 105.730 kb on - strand, within H281DRAFT_03596at 105.836 kb on + strand, within H281DRAFT_03596at 105.837 kb on - strand, within H281DRAFT_03596at 105.837 kb on - strand, within H281DRAFT_03596at 105.837 kb on - strand, within H281DRAFT_03596at 105.888 kb on + strand, within H281DRAFT_03596at 106.000 kb on - strand, within H281DRAFT_03596at 106.027 kb on - strand, within H281DRAFT_03596at 106.027 kb on - strand, within H281DRAFT_03596at 106.125 kb on + strandat 106.160 kb on + strandat 106.161 kb on - strandat 106.161 kb on - strandat 106.235 kb on + strandat 106.236 kb on - strandat 106.279 kb on - strandat 106.346 kb on + strandat 106.347 kb on - strandat 106.347 kb on - strandat 106.347 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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104,738 - -1.1
105,523 + -0.5
105,671 + H281DRAFT_03596 0.27 -1.5
105,671 + H281DRAFT_03596 0.27 -0.1
105,671 + H281DRAFT_03596 0.27 -0.6
105,671 + H281DRAFT_03596 0.27 +0.0
105,672 - H281DRAFT_03596 0.27 -0.8
105,672 - H281DRAFT_03596 0.27 -0.7
105,672 - H281DRAFT_03596 0.27 +0.5
105,730 - H281DRAFT_03596 0.36 +0.6
105,836 + H281DRAFT_03596 0.53 -0.6
105,837 - H281DRAFT_03596 0.53 +0.1
105,837 - H281DRAFT_03596 0.53 +0.1
105,837 - H281DRAFT_03596 0.53 +0.4
105,888 + H281DRAFT_03596 0.61 -0.1
106,000 - H281DRAFT_03596 0.79 +1.5
106,027 - H281DRAFT_03596 0.83 -1.4
106,027 - H281DRAFT_03596 0.83 +1.2
106,125 + +0.2
106,160 + +0.4
106,161 - +1.2
106,161 - -0.0
106,235 + -0.5
106,236 - -0.1
106,279 - -0.3
106,346 + -0.2
106,347 - -1.2
106,347 - +0.7
106,347 - +0.9

Or see this region's nucleotide sequence