Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03563 and H281DRAFT_03564 are separated by 69 nucleotides H281DRAFT_03564 and H281DRAFT_03565 are separated by 30 nucleotides H281DRAFT_03565 and H281DRAFT_03566 are separated by 244 nucleotides
H281DRAFT_03563: H281DRAFT_03563 - FAD/FMN-containing dehydrogenase, at 68,942 to 71,962
_03563
H281DRAFT_03564: H281DRAFT_03564 - 2-keto-4-pentenoate hydratase, at 72,032 to 72,790
_03564
H281DRAFT_03565: H281DRAFT_03565 - Sugar phosphate permease, at 72,821 to 74,107
_03565
H281DRAFT_03566: H281DRAFT_03566 - alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase, at 74,352 to 75,572
_03566
Position (kb) 72
73
74
75 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 71.869 kb on + strand at 71.869 kb on + strand at 71.870 kb on - strand at 71.963 kb on - strand at 72.036 kb on + strand at 72.118 kb on - strand, within H281DRAFT_03564 at 72.300 kb on + strand, within H281DRAFT_03564 at 72.454 kb on + strand, within H281DRAFT_03564 at 72.454 kb on + strand, within H281DRAFT_03564 at 72.455 kb on - strand, within H281DRAFT_03564 at 72.456 kb on + strand, within H281DRAFT_03564 at 72.456 kb on + strand, within H281DRAFT_03564 at 72.456 kb on + strand, within H281DRAFT_03564 at 72.457 kb on - strand, within H281DRAFT_03564 at 72.812 kb on - strand at 72.812 kb on - strand at 72.823 kb on - strand at 72.823 kb on - strand at 72.932 kb on - strand at 73.146 kb on + strand at 73.147 kb on - strand, within H281DRAFT_03565 at 73.147 kb on - strand, within H281DRAFT_03565 at 73.251 kb on + strand, within H281DRAFT_03565 at 73.251 kb on + strand, within H281DRAFT_03565 at 73.252 kb on - strand, within H281DRAFT_03565 at 73.365 kb on + strand, within H281DRAFT_03565 at 73.365 kb on + strand, within H281DRAFT_03565 at 73.366 kb on - strand, within H281DRAFT_03565 at 73.408 kb on - strand, within H281DRAFT_03565 at 73.416 kb on + strand, within H281DRAFT_03565 at 73.416 kb on + strand, within H281DRAFT_03565 at 73.426 kb on + strand, within H281DRAFT_03565 at 73.496 kb on + strand, within H281DRAFT_03565 at 73.520 kb on - strand at 73.599 kb on + strand, within H281DRAFT_03565 at 73.600 kb on - strand, within H281DRAFT_03565 at 73.873 kb on + strand, within H281DRAFT_03565 at 73.874 kb on - strand at 73.897 kb on + strand, within H281DRAFT_03565 at 73.929 kb on + strand, within H281DRAFT_03565 at 73.929 kb on + strand, within H281DRAFT_03565 at 73.930 kb on - strand, within H281DRAFT_03565 at 73.930 kb on - strand, within H281DRAFT_03565 at 74.012 kb on - strand at 74.034 kb on + strand at 74.034 kb on + strand at 74.034 kb on + strand at 74.046 kb on + strand at 74.047 kb on - strand at 74.066 kb on + strand at 74.066 kb on + strand at 74.067 kb on - strand at 74.074 kb on + strand at 74.174 kb on + strand at 74.581 kb on + strand, within H281DRAFT_03566 at 74.582 kb on - strand, within H281DRAFT_03566 at 74.648 kb on + strand, within H281DRAFT_03566 at 74.649 kb on - strand, within H281DRAFT_03566 at 74.650 kb on + strand, within H281DRAFT_03566 at 74.651 kb on - strand, within H281DRAFT_03566 at 74.652 kb on + strand, within H281DRAFT_03566 at 74.652 kb on + strand, within H281DRAFT_03566 at 74.653 kb on - strand, within H281DRAFT_03566 at 74.653 kb on - strand, within H281DRAFT_03566 at 74.653 kb on - strand, within H281DRAFT_03566
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) remove 71,869 + +0.2 71,869 + -0.0 71,870 - +0.5 71,963 - -0.6 72,036 + -1.2 72,118 - H281DRAFT_03564 0.11 -0.9 72,300 + H281DRAFT_03564 0.35 -0.7 72,454 + H281DRAFT_03564 0.56 -1.5 72,454 + H281DRAFT_03564 0.56 +2.3 72,455 - H281DRAFT_03564 0.56 +0.3 72,456 + H281DRAFT_03564 0.56 +0.5 72,456 + H281DRAFT_03564 0.56 -0.5 72,456 + H281DRAFT_03564 0.56 +0.5 72,457 - H281DRAFT_03564 0.56 -0.2 72,812 - -1.1 72,812 - -0.0 72,823 - -0.9 72,823 - -0.3 72,932 - -0.6 73,146 + +1.7 73,147 - H281DRAFT_03565 0.25 +1.4 73,147 - H281DRAFT_03565 0.25 +0.7 73,251 + H281DRAFT_03565 0.33 +0.4 73,251 + H281DRAFT_03565 0.33 -0.9 73,252 - H281DRAFT_03565 0.33 +2.9 73,365 + H281DRAFT_03565 0.42 +2.1 73,365 + H281DRAFT_03565 0.42 -0.4 73,366 - H281DRAFT_03565 0.42 +1.5 73,408 - H281DRAFT_03565 0.46 +0.3 73,416 + H281DRAFT_03565 0.46 +0.5 73,416 + H281DRAFT_03565 0.46 -0.4 73,426 + H281DRAFT_03565 0.47 +0.1 73,496 + H281DRAFT_03565 0.52 +1.3 73,520 - +0.5 73,599 + H281DRAFT_03565 0.60 +0.4 73,600 - H281DRAFT_03565 0.61 +0.8 73,873 + H281DRAFT_03565 0.82 +3.7 73,874 - -0.2 73,897 + H281DRAFT_03565 0.84 -1.8 73,929 + H281DRAFT_03565 0.86 +0.9 73,929 + H281DRAFT_03565 0.86 +2.2 73,930 - H281DRAFT_03565 0.86 -0.1 73,930 - H281DRAFT_03565 0.86 -0.6 74,012 - +0.1 74,034 + -1.3 74,034 + -0.4 74,034 + +0.4 74,046 + -0.1 74,047 - +0.6 74,066 + +0.2 74,066 + -0.8 74,067 - -0.0 74,074 + -0.9 74,174 + +0.3 74,581 + H281DRAFT_03566 0.19 -0.4 74,582 - H281DRAFT_03566 0.19 +0.7 74,648 + H281DRAFT_03566 0.24 -0.8 74,649 - H281DRAFT_03566 0.24 +0.4 74,650 + H281DRAFT_03566 0.24 +0.5 74,651 - H281DRAFT_03566 0.24 -0.2 74,652 + H281DRAFT_03566 0.25 +0.3 74,652 + H281DRAFT_03566 0.25 +0.7 74,653 - H281DRAFT_03566 0.25 +0.4 74,653 - H281DRAFT_03566 0.25 +0.0 74,653 - H281DRAFT_03566 0.25 +0.6
Or see this region's nucleotide sequence