Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03226

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03225 and H281DRAFT_03226 are separated by 87 nucleotidesH281DRAFT_03226 and H281DRAFT_03227 are separated by 414 nucleotides H281DRAFT_03225: H281DRAFT_03225 - mannose ABC transporter membrane protein /fructose ABC transporter membrane protein /ribose ABC transporter membrane protein, at 275,784 to 276,770 _03225 H281DRAFT_03226: H281DRAFT_03226 - mannose-binding protein /fructose-binding protein /ribose-binding protein, at 276,858 to 277,862 _03226 H281DRAFT_03227: H281DRAFT_03227 - transcriptional regulator, LacI family, at 278,277 to 279,308 _03227 Position (kb) 276 277 278Strain fitness (log2 ratio) -1 0 1 2at 276.211 kb on + strand, within H281DRAFT_03225at 276.212 kb on - strandat 277.655 kb on + strand, within H281DRAFT_03226at 278.183 kb on - strandat 278.635 kb on + strand, within H281DRAFT_03227at 278.652 kb on - strand, within H281DRAFT_03227

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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276,211 + H281DRAFT_03225 0.43 +1.9
276,212 - -0.0
277,655 + H281DRAFT_03226 0.79 +0.7
278,183 - -1.5
278,635 + H281DRAFT_03227 0.35 +0.5
278,652 - H281DRAFT_03227 0.36 +0.5

Or see this region's nucleotide sequence