Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03066

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03065 and H281DRAFT_03066 are separated by 107 nucleotidesH281DRAFT_03066 and H281DRAFT_03067 are separated by 123 nucleotidesH281DRAFT_03067 and H281DRAFT_03068 are separated by 53 nucleotides H281DRAFT_03065: H281DRAFT_03065 - MFS transporter, DHA1 family, multidrug resistance protein, at 96,615 to 97,877 _03065 H281DRAFT_03066: H281DRAFT_03066 - transcriptional regulator, LysR family, at 97,985 to 98,911 _03066 H281DRAFT_03067: H281DRAFT_03067 - peroxiredoxin, Ohr subfamily, at 99,035 to 99,451 _03067 H281DRAFT_03068: H281DRAFT_03068 - hypothetical protein, at 99,505 to 99,732 _03068 Position (kb) 97 98 99Strain fitness (log2 ratio) -1 0 1 2 3at 97.058 kb on + strand, within H281DRAFT_03065at 97.059 kb on - strand, within H281DRAFT_03065at 97.059 kb on - strand, within H281DRAFT_03065at 97.442 kb on + strand, within H281DRAFT_03065at 97.555 kb on - strand, within H281DRAFT_03065at 97.711 kb on + strandat 97.712 kb on - strand, within H281DRAFT_03065at 97.924 kb on - strandat 98.243 kb on - strand, within H281DRAFT_03066at 98.263 kb on + strand, within H281DRAFT_03066at 98.782 kb on + strand, within H281DRAFT_03066at 98.783 kb on - strand, within H281DRAFT_03066at 98.953 kb on - strandat 98.977 kb on - strandat 98.993 kb on + strandat 99.017 kb on - strandat 99.017 kb on - strandat 99.085 kb on - strand, within H281DRAFT_03067at 99.467 kb on - strandat 99.469 kb on + strandat 99.507 kb on - strandat 99.507 kb on - strandat 99.507 kb on - strandat 99.724 kb on + strandat 99.850 kb on + strandat 99.866 kb on - strandat 99.908 kb on - strandat 99.908 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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97,058 + H281DRAFT_03065 0.35 +0.0
97,059 - H281DRAFT_03065 0.35 +3.2
97,059 - H281DRAFT_03065 0.35 +0.4
97,442 + H281DRAFT_03065 0.65 -0.6
97,555 - H281DRAFT_03065 0.74 -1.0
97,711 + -1.3
97,712 - H281DRAFT_03065 0.87 +1.0
97,924 - +0.4
98,243 - H281DRAFT_03066 0.28 +0.4
98,263 + H281DRAFT_03066 0.30 +1.1
98,782 + H281DRAFT_03066 0.86 +0.0
98,783 - H281DRAFT_03066 0.86 -0.1
98,953 - +0.3
98,977 - -0.1
98,993 + -0.5
99,017 - +0.9
99,017 - -1.3
99,085 - H281DRAFT_03067 0.12 -0.3
99,467 - +1.3
99,469 + +0.0
99,507 - -0.9
99,507 - +0.1
99,507 - -0.0
99,724 + +0.9
99,850 + -0.6
99,866 - +0.4
99,908 - -0.4
99,908 - +0.4

Or see this region's nucleotide sequence