Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00282

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00281 and H281DRAFT_00282 are separated by 443 nucleotidesH281DRAFT_00282 and H281DRAFT_00283 overlap by 1 nucleotides H281DRAFT_00281: H281DRAFT_00281 - Spermidine synthase, at 301,365 to 302,276 _00281 H281DRAFT_00282: H281DRAFT_00282 - Protein of unknown function (DUF3311), at 302,720 to 302,959 _00282 H281DRAFT_00283: H281DRAFT_00283 - solute:Na+ symporter, SSS family, at 302,959 to 304,509 _00283 Position (kb) 302 303Strain fitness (log2 ratio) -1 0 1 2 3 4at 301.921 kb on - strand, within H281DRAFT_00281at 302.364 kb on - strandat 302.574 kb on + strandat 302.575 kb on - strandat 302.575 kb on - strandat 302.575 kb on - strandat 302.576 kb on + strandat 302.576 kb on + strandat 302.576 kb on + strandat 302.577 kb on - strandat 302.700 kb on - strandat 302.700 kb on - strandat 302.702 kb on + strandat 302.852 kb on + strand, within H281DRAFT_00282at 302.907 kb on - strand, within H281DRAFT_00282at 302.908 kb on + strand, within H281DRAFT_00282at 302.909 kb on - strand, within H281DRAFT_00282at 302.909 kb on - strand, within H281DRAFT_00282at 302.990 kb on + strandat 303.140 kb on - strand, within H281DRAFT_00283at 303.206 kb on - strand, within H281DRAFT_00283at 303.370 kb on + strand, within H281DRAFT_00283at 303.371 kb on - strand, within H281DRAFT_00283at 303.485 kb on - strand, within H281DRAFT_00283at 303.485 kb on - strand, within H281DRAFT_00283at 303.547 kb on + strand, within H281DRAFT_00283at 303.547 kb on + strand, within H281DRAFT_00283at 303.548 kb on - strand, within H281DRAFT_00283at 303.548 kb on - strand, within H281DRAFT_00283at 303.673 kb on + strand, within H281DRAFT_00283at 303.674 kb on - strand, within H281DRAFT_00283at 303.676 kb on - strand, within H281DRAFT_00283at 303.683 kb on - strand, within H281DRAFT_00283at 303.768 kb on + strand, within H281DRAFT_00283at 303.886 kb on + strand, within H281DRAFT_00283

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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301,921 - H281DRAFT_00281 0.61 -0.1
302,364 - -0.2
302,574 + +0.2
302,575 - -1.0
302,575 - +0.5
302,575 - +1.1
302,576 + +0.2
302,576 + +0.1
302,576 + +1.1
302,577 - -0.3
302,700 - -1.7
302,700 - +1.6
302,702 + +0.3
302,852 + H281DRAFT_00282 0.55 -0.5
302,907 - H281DRAFT_00282 0.78 -0.2
302,908 + H281DRAFT_00282 0.78 -0.9
302,909 - H281DRAFT_00282 0.79 +0.6
302,909 - H281DRAFT_00282 0.79 -0.9
302,990 + -0.1
303,140 - H281DRAFT_00283 0.12 -1.0
303,206 - H281DRAFT_00283 0.16 +0.5
303,370 + H281DRAFT_00283 0.26 -1.0
303,371 - H281DRAFT_00283 0.27 +0.4
303,485 - H281DRAFT_00283 0.34 -0.9
303,485 - H281DRAFT_00283 0.34 -0.3
303,547 + H281DRAFT_00283 0.38 +0.5
303,547 + H281DRAFT_00283 0.38 +3.9
303,548 - H281DRAFT_00283 0.38 -0.4
303,548 - H281DRAFT_00283 0.38 +1.0
303,673 + H281DRAFT_00283 0.46 +0.0
303,674 - H281DRAFT_00283 0.46 +1.1
303,676 - H281DRAFT_00283 0.46 +0.3
303,683 - H281DRAFT_00283 0.47 +0.6
303,768 + H281DRAFT_00283 0.52 +0.4
303,886 + H281DRAFT_00283 0.60 +0.3

Or see this region's nucleotide sequence