Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2798 and Dsui_2799 are separated by 108 nucleotides Dsui_2799 and Dsui_2800 overlap by 1 nucleotides
Dsui_2798: Dsui_2798 - arabinose efflux permease family protein, at 2,967,161 to 2,968,381
_2798
Dsui_2799: Dsui_2799 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, at 2,968,490 to 2,970,502
_2799
Dsui_2800: Dsui_2800 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component, at 2,970,502 to 2,971,950
_2800
Position (kb)
2968
2969
2970
2971 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2967.789 kb on + strand, within Dsui_2798 at 2967.789 kb on + strand, within Dsui_2798 at 2968.041 kb on + strand, within Dsui_2798 at 2968.091 kb on - strand, within Dsui_2798 at 2968.116 kb on + strand, within Dsui_2798 at 2968.130 kb on + strand, within Dsui_2798 at 2968.149 kb on - strand at 2968.173 kb on - strand, within Dsui_2798 at 2968.218 kb on + strand, within Dsui_2798 at 2968.233 kb on + strand, within Dsui_2798 at 2968.233 kb on + strand, within Dsui_2798 at 2968.241 kb on - strand at 2968.297 kb on + strand at 2968.316 kb on + strand at 2968.418 kb on - strand at 2968.540 kb on - strand at 2968.615 kb on - strand at 2968.633 kb on + strand at 2968.710 kb on - strand, within Dsui_2799 at 2968.754 kb on + strand at 2968.764 kb on + strand at 2968.820 kb on + strand at 2968.844 kb on - strand, within Dsui_2799 at 2968.909 kb on + strand at 2968.953 kb on + strand, within Dsui_2799 at 2969.116 kb on + strand at 2969.116 kb on + strand, within Dsui_2799 at 2969.340 kb on - strand, within Dsui_2799 at 2969.381 kb on - strand, within Dsui_2799 at 2969.555 kb on - strand, within Dsui_2799 at 2969.563 kb on + strand at 2969.694 kb on + strand at 2969.868 kb on - strand, within Dsui_2799 at 2970.108 kb on - strand, within Dsui_2799 at 2970.263 kb on + strand at 2970.351 kb on - strand at 2970.396 kb on - strand at 2970.403 kb on - strand at 2970.436 kb on - strand at 2970.616 kb on - strand at 2970.630 kb on - strand at 2970.634 kb on - strand at 2970.635 kb on - strand at 2970.654 kb on + strand, within Dsui_2800 at 2970.662 kb on - strand at 2970.662 kb on - strand, within Dsui_2800 at 2970.678 kb on - strand, within Dsui_2800 at 2970.715 kb on - strand, within Dsui_2800 at 2970.721 kb on - strand, within Dsui_2800 at 2970.721 kb on - strand, within Dsui_2800 at 2970.721 kb on - strand, within Dsui_2800 at 2970.728 kb on - strand at 2970.767 kb on + strand at 2970.842 kb on + strand, within Dsui_2800 at 2970.861 kb on - strand, within Dsui_2800 at 2971.005 kb on + strand, within Dsui_2800 at 2971.037 kb on + strand at 2971.054 kb on - strand, within Dsui_2800 at 2971.062 kb on + strand, within Dsui_2800 at 2971.138 kb on + strand at 2971.138 kb on - strand, within Dsui_2800 at 2971.166 kb on - strand, within Dsui_2800 at 2971.198 kb on + strand, within Dsui_2800 at 2971.227 kb on - strand, within Dsui_2800 at 2971.232 kb on - strand, within Dsui_2800 at 2971.232 kb on - strand, within Dsui_2800 at 2971.232 kb on - strand, within Dsui_2800 at 2971.251 kb on + strand, within Dsui_2800 at 2971.441 kb on + strand, within Dsui_2800
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 2,967,789 + Dsui_2798 0.51 -0.7 2,967,789 + Dsui_2798 0.51 -2.5 2,968,041 + Dsui_2798 0.72 -0.7 2,968,091 - Dsui_2798 0.76 -0.8 2,968,116 + Dsui_2798 0.78 -0.1 2,968,130 + Dsui_2798 0.79 -0.1 2,968,149 - +0.2 2,968,173 - Dsui_2798 0.83 -0.2 2,968,218 + Dsui_2798 0.87 -0.1 2,968,233 + Dsui_2798 0.88 +0.0 2,968,233 + Dsui_2798 0.88 +1.2 2,968,241 - -0.3 2,968,297 + +0.8 2,968,316 + +0.9 2,968,418 - +0.7 2,968,540 - -0.8 2,968,615 - -0.3 2,968,633 + -0.8 2,968,710 - Dsui_2799 0.11 -2.2 2,968,754 + -3.5 2,968,764 + -1.9 2,968,820 + -3.1 2,968,844 - Dsui_2799 0.18 -2.2 2,968,909 + -4.0 2,968,953 + Dsui_2799 0.23 -2.2 2,969,116 + -1.2 2,969,116 + Dsui_2799 0.31 -0.4 2,969,340 - Dsui_2799 0.42 -1.8 2,969,381 - Dsui_2799 0.44 +0.1 2,969,555 - Dsui_2799 0.53 +0.3 2,969,563 + -2.6 2,969,694 + -2.3 2,969,868 - Dsui_2799 0.68 -1.3 2,970,108 - Dsui_2799 0.80 -2.0 2,970,263 + -2.8 2,970,351 - -0.0 2,970,396 - -4.7 2,970,403 - -2.4 2,970,436 - -2.1 2,970,616 - -1.9 2,970,630 - -0.3 2,970,634 - -1.4 2,970,635 - -3.3 2,970,654 + Dsui_2800 0.10 -4.8 2,970,662 - -2.9 2,970,662 - Dsui_2800 0.11 -0.2 2,970,678 - Dsui_2800 0.12 -1.6 2,970,715 - Dsui_2800 0.15 +0.1 2,970,721 - Dsui_2800 0.15 -1.5 2,970,721 - Dsui_2800 0.15 -0.8 2,970,721 - Dsui_2800 0.15 -3.2 2,970,728 - -2.1 2,970,767 + -0.3 2,970,842 + Dsui_2800 0.23 -0.6 2,970,861 - Dsui_2800 0.25 -0.8 2,971,005 + Dsui_2800 0.35 -2.8 2,971,037 + -1.2 2,971,054 - Dsui_2800 0.38 -2.3 2,971,062 + Dsui_2800 0.39 -2.2 2,971,138 + -1.8 2,971,138 - Dsui_2800 0.44 -0.0 2,971,166 - Dsui_2800 0.46 -1.6 2,971,198 + Dsui_2800 0.48 -0.8 2,971,227 - Dsui_2800 0.50 -1.2 2,971,232 - Dsui_2800 0.50 -0.3 2,971,232 - Dsui_2800 0.50 -0.1 2,971,232 - Dsui_2800 0.50 -1.1 2,971,251 + Dsui_2800 0.52 -2.3 2,971,441 + Dsui_2800 0.65 -2.9
Or see this region's nucleotide sequence