Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1925 and Dsui_1926 are separated by 1 nucleotides Dsui_1926 and Dsui_1927 are separated by 743 nucleotides
Dsui_1925: Dsui_1925 - acetolactate synthase, large subunit, biosynthetic type, at 2,035,028 to 2,036,746
_1925
Dsui_1926: Dsui_1926 - acetolactate synthase, small (regulatory) subunit, at 2,036,748 to 2,037,065
_1926
Dsui_1927: Dsui_1927 - hypothetical protein, at 2,037,809 to 2,038,468
_1927
Position (kb)
2036
2037
2038 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2035.778 kb on + strand, within Dsui_1925 at 2035.793 kb on + strand, within Dsui_1925 at 2035.816 kb on - strand at 2035.860 kb on + strand at 2035.891 kb on + strand, within Dsui_1925 at 2035.958 kb on + strand, within Dsui_1925 at 2035.986 kb on + strand, within Dsui_1925 at 2036.004 kb on - strand at 2036.012 kb on + strand, within Dsui_1925 at 2036.029 kb on - strand at 2036.088 kb on + strand, within Dsui_1925 at 2036.088 kb on + strand, within Dsui_1925 at 2036.176 kb on + strand, within Dsui_1925 at 2036.204 kb on - strand at 2036.245 kb on - strand at 2036.252 kb on + strand, within Dsui_1925 at 2036.257 kb on + strand, within Dsui_1925 at 2036.265 kb on - strand, within Dsui_1925 at 2036.358 kb on - strand, within Dsui_1925 at 2036.446 kb on + strand, within Dsui_1925 at 2036.506 kb on + strand, within Dsui_1925 at 2036.506 kb on + strand, within Dsui_1925 at 2036.506 kb on + strand, within Dsui_1925 at 2036.594 kb on + strand at 2036.700 kb on - strand at 2036.710 kb on + strand at 2036.778 kb on + strand at 2036.778 kb on + strand at 2036.783 kb on + strand, within Dsui_1926 at 2036.835 kb on + strand, within Dsui_1926 at 2036.861 kb on - strand at 2036.976 kb on - strand at 2036.986 kb on + strand, within Dsui_1926 at 2036.996 kb on + strand, within Dsui_1926 at 2037.101 kb on - strand at 2037.248 kb on + strand at 2037.254 kb on + strand at 2037.254 kb on + strand at 2037.254 kb on + strand at 2037.276 kb on - strand at 2037.287 kb on + strand at 2037.294 kb on - strand at 2037.310 kb on - strand at 2037.380 kb on + strand at 2037.380 kb on + strand at 2037.403 kb on + strand at 2037.461 kb on + strand at 2037.469 kb on - strand at 2037.471 kb on + strand at 2037.471 kb on + strand at 2037.479 kb on - strand at 2037.481 kb on + strand at 2037.481 kb on + strand at 2037.481 kb on + strand at 2037.489 kb on - strand at 2037.489 kb on - strand at 2037.489 kb on - strand at 2037.489 kb on - strand at 2037.489 kb on - strand at 2037.489 kb on - strand at 2037.489 kb on - strand at 2037.491 kb on + strand at 2037.513 kb on - strand at 2037.536 kb on - strand at 2037.600 kb on - strand at 2037.602 kb on + strand at 2037.602 kb on + strand at 2037.607 kb on + strand at 2037.607 kb on + strand at 2037.610 kb on - strand at 2037.610 kb on - strand at 2037.615 kb on - strand at 2037.619 kb on + strand at 2037.643 kb on + strand at 2037.650 kb on - strand at 2037.667 kb on + strand at 2037.668 kb on + strand at 2037.668 kb on + strand at 2037.676 kb on - strand at 2037.715 kb on + strand at 2037.734 kb on + strand at 2037.747 kb on - strand at 2037.747 kb on - strand at 2037.775 kb on - strand at 2037.777 kb on + strand at 2037.793 kb on + strand at 2037.793 kb on + strand at 2037.793 kb on + strand at 2037.801 kb on - strand at 2037.906 kb on - strand at 2037.907 kb on + strand, within Dsui_1927 at 2037.910 kb on + strand, within Dsui_1927 at 2037.910 kb on + strand at 2037.912 kb on + strand, within Dsui_1927 at 2037.912 kb on + strand, within Dsui_1927 at 2037.912 kb on + strand, within Dsui_1927 at 2037.912 kb on + strand at 2037.912 kb on + strand, within Dsui_1927 at 2037.920 kb on - strand, within Dsui_1927 at 2037.920 kb on - strand, within Dsui_1927 at 2037.920 kb on - strand, within Dsui_1927 at 2037.920 kb on - strand, within Dsui_1927 at 2037.920 kb on - strand, within Dsui_1927 at 2037.920 kb on - strand, within Dsui_1927 at 2037.920 kb on - strand, within Dsui_1927 at 2037.920 kb on - strand, within Dsui_1927 at 2037.925 kb on - strand, within Dsui_1927 at 2037.927 kb on - strand, within Dsui_1927 at 2037.929 kb on + strand, within Dsui_1927 at 2037.931 kb on + strand at 2037.931 kb on + strand, within Dsui_1927 at 2037.939 kb on - strand, within Dsui_1927 at 2037.939 kb on - strand, within Dsui_1927 at 2037.939 kb on - strand, within Dsui_1927 at 2037.939 kb on - strand, within Dsui_1927 at 2037.939 kb on - strand, within Dsui_1927 at 2038.006 kb on - strand, within Dsui_1927 at 2038.020 kb on - strand, within Dsui_1927 at 2038.063 kb on + strand, within Dsui_1927
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 2,035,778 + Dsui_1925 0.44 -0.0 2,035,793 + Dsui_1925 0.45 +1.4 2,035,816 - -1.8 2,035,860 + -0.0 2,035,891 + Dsui_1925 0.50 +0.2 2,035,958 + Dsui_1925 0.54 -3.0 2,035,986 + Dsui_1925 0.56 -0.4 2,036,004 - -3.0 2,036,012 + Dsui_1925 0.57 +2.2 2,036,029 - +0.0 2,036,088 + Dsui_1925 0.62 -3.5 2,036,088 + Dsui_1925 0.62 +0.3 2,036,176 + Dsui_1925 0.67 -0.6 2,036,204 - -1.4 2,036,245 - -1.3 2,036,252 + Dsui_1925 0.71 +0.8 2,036,257 + Dsui_1925 0.71 +0.4 2,036,265 - Dsui_1925 0.72 -2.3 2,036,358 - Dsui_1925 0.77 -0.1 2,036,446 + Dsui_1925 0.82 +0.6 2,036,506 + Dsui_1925 0.86 +0.7 2,036,506 + Dsui_1925 0.86 +0.0 2,036,506 + Dsui_1925 0.86 -0.2 2,036,594 + -1.4 2,036,700 - -3.2 2,036,710 + +1.0 2,036,778 + +0.2 2,036,778 + -0.5 2,036,783 + Dsui_1926 0.11 +1.2 2,036,835 + Dsui_1926 0.27 +1.1 2,036,861 - -3.2 2,036,976 - -1.5 2,036,986 + Dsui_1926 0.75 +0.3 2,036,996 + Dsui_1926 0.78 +0.7 2,037,101 - +0.1 2,037,248 + -2.5 2,037,254 + +0.6 2,037,254 + -1.0 2,037,254 + +1.9 2,037,276 - +1.5 2,037,287 + +0.4 2,037,294 - -0.7 2,037,310 - +1.8 2,037,380 + -1.8 2,037,380 + -0.8 2,037,403 + -0.2 2,037,461 + +0.3 2,037,469 - +0.0 2,037,471 + +1.4 2,037,471 + -0.6 2,037,479 - -1.4 2,037,481 + +0.7 2,037,481 + -0.2 2,037,481 + +0.1 2,037,489 - -0.4 2,037,489 - +0.4 2,037,489 - -0.2 2,037,489 - +1.7 2,037,489 - -0.5 2,037,489 - +0.0 2,037,489 - +0.6 2,037,491 + +0.8 2,037,513 - +0.1 2,037,536 - +0.6 2,037,600 - +0.5 2,037,602 + +1.9 2,037,602 + +0.7 2,037,607 + +1.0 2,037,607 + +0.5 2,037,610 - +0.5 2,037,610 - +1.2 2,037,615 - +2.7 2,037,619 + -0.7 2,037,643 + -1.0 2,037,650 - +1.1 2,037,667 + -1.4 2,037,668 + +0.1 2,037,668 + -1.3 2,037,676 - -1.8 2,037,715 + -1.2 2,037,734 + +0.7 2,037,747 - -0.0 2,037,747 - -0.1 2,037,775 - +0.2 2,037,777 + +0.9 2,037,793 + -2.1 2,037,793 + -2.4 2,037,793 + -1.1 2,037,801 - +0.9 2,037,906 - -1.9 2,037,907 + Dsui_1927 0.15 -0.7 2,037,910 + Dsui_1927 0.15 +0.7 2,037,910 + +1.3 2,037,912 + Dsui_1927 0.16 -0.3 2,037,912 + Dsui_1927 0.16 +0.9 2,037,912 + Dsui_1927 0.16 +0.6 2,037,912 + -0.5 2,037,912 + Dsui_1927 0.16 +0.3 2,037,920 - Dsui_1927 0.17 +0.7 2,037,920 - Dsui_1927 0.17 -4.3 2,037,920 - Dsui_1927 0.17 -0.1 2,037,920 - Dsui_1927 0.17 -0.0 2,037,920 - Dsui_1927 0.17 -1.6 2,037,920 - Dsui_1927 0.17 +1.8 2,037,920 - Dsui_1927 0.17 +0.5 2,037,920 - Dsui_1927 0.17 +0.1 2,037,925 - Dsui_1927 0.18 +0.6 2,037,927 - Dsui_1927 0.18 +1.2 2,037,929 + Dsui_1927 0.18 +0.5 2,037,931 + +2.9 2,037,931 + Dsui_1927 0.18 -1.2 2,037,939 - Dsui_1927 0.20 +1.2 2,037,939 - Dsui_1927 0.20 +0.2 2,037,939 - Dsui_1927 0.20 -0.6 2,037,939 - Dsui_1927 0.20 -0.0 2,037,939 - Dsui_1927 0.20 -0.5 2,038,006 - Dsui_1927 0.30 +1.8 2,038,020 - Dsui_1927 0.32 +2.0 2,038,063 + Dsui_1927 0.38 -0.8
Or see this region's nucleotide sequence