Strain Fitness in Dechlorosoma suillum PS around Dsui_1926

Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1925 and Dsui_1926 are separated by 1 nucleotidesDsui_1926 and Dsui_1927 are separated by 743 nucleotides Dsui_1925: Dsui_1925 - acetolactate synthase, large subunit, biosynthetic type, at 2,035,028 to 2,036,746 _1925 Dsui_1926: Dsui_1926 - acetolactate synthase, small (regulatory) subunit, at 2,036,748 to 2,037,065 _1926 Dsui_1927: Dsui_1927 - hypothetical protein, at 2,037,809 to 2,038,468 _1927 Position (kb) 2036 2037 2038Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2035.778 kb on + strand, within Dsui_1925at 2035.793 kb on + strand, within Dsui_1925at 2035.816 kb on - strandat 2035.860 kb on + strandat 2035.891 kb on + strand, within Dsui_1925at 2035.958 kb on + strand, within Dsui_1925at 2035.986 kb on + strand, within Dsui_1925at 2036.004 kb on - strandat 2036.012 kb on + strand, within Dsui_1925at 2036.029 kb on - strandat 2036.088 kb on + strand, within Dsui_1925at 2036.088 kb on + strand, within Dsui_1925at 2036.176 kb on + strand, within Dsui_1925at 2036.204 kb on - strandat 2036.245 kb on - strandat 2036.252 kb on + strand, within Dsui_1925at 2036.257 kb on + strand, within Dsui_1925at 2036.265 kb on - strand, within Dsui_1925at 2036.358 kb on - strand, within Dsui_1925at 2036.446 kb on + strand, within Dsui_1925at 2036.506 kb on + strand, within Dsui_1925at 2036.506 kb on + strand, within Dsui_1925at 2036.506 kb on + strand, within Dsui_1925at 2036.594 kb on + strandat 2036.700 kb on - strandat 2036.710 kb on + strandat 2036.778 kb on + strandat 2036.778 kb on + strandat 2036.783 kb on + strand, within Dsui_1926at 2036.835 kb on + strand, within Dsui_1926at 2036.861 kb on - strandat 2036.976 kb on - strandat 2036.986 kb on + strand, within Dsui_1926at 2036.996 kb on + strand, within Dsui_1926at 2037.101 kb on - strandat 2037.248 kb on + strandat 2037.254 kb on + strandat 2037.254 kb on + strandat 2037.254 kb on + strandat 2037.276 kb on - strandat 2037.287 kb on + strandat 2037.294 kb on - strandat 2037.310 kb on - strandat 2037.380 kb on + strandat 2037.380 kb on + strandat 2037.403 kb on + strandat 2037.461 kb on + strandat 2037.469 kb on - strandat 2037.471 kb on + strandat 2037.471 kb on + strandat 2037.479 kb on - strandat 2037.481 kb on + strandat 2037.481 kb on + strandat 2037.481 kb on + strandat 2037.489 kb on - strandat 2037.489 kb on - strandat 2037.489 kb on - strandat 2037.489 kb on - strandat 2037.489 kb on - strandat 2037.489 kb on - strandat 2037.489 kb on - strandat 2037.491 kb on + strandat 2037.513 kb on - strandat 2037.536 kb on - strandat 2037.600 kb on - strandat 2037.602 kb on + strandat 2037.602 kb on + strandat 2037.607 kb on + strandat 2037.607 kb on + strandat 2037.610 kb on - strandat 2037.610 kb on - strandat 2037.615 kb on - strandat 2037.619 kb on + strandat 2037.643 kb on + strandat 2037.650 kb on - strandat 2037.667 kb on + strandat 2037.668 kb on + strandat 2037.668 kb on + strandat 2037.676 kb on - strandat 2037.715 kb on + strandat 2037.734 kb on + strandat 2037.747 kb on - strandat 2037.747 kb on - strandat 2037.775 kb on - strandat 2037.777 kb on + strandat 2037.793 kb on + strandat 2037.793 kb on + strandat 2037.793 kb on + strandat 2037.801 kb on - strandat 2037.906 kb on - strandat 2037.907 kb on + strand, within Dsui_1927at 2037.910 kb on + strand, within Dsui_1927at 2037.910 kb on + strandat 2037.912 kb on + strand, within Dsui_1927at 2037.912 kb on + strand, within Dsui_1927at 2037.912 kb on + strand, within Dsui_1927at 2037.912 kb on + strandat 2037.912 kb on + strand, within Dsui_1927at 2037.920 kb on - strand, within Dsui_1927at 2037.920 kb on - strand, within Dsui_1927at 2037.920 kb on - strand, within Dsui_1927at 2037.920 kb on - strand, within Dsui_1927at 2037.920 kb on - strand, within Dsui_1927at 2037.920 kb on - strand, within Dsui_1927at 2037.920 kb on - strand, within Dsui_1927at 2037.920 kb on - strand, within Dsui_1927at 2037.925 kb on - strand, within Dsui_1927at 2037.927 kb on - strand, within Dsui_1927at 2037.929 kb on + strand, within Dsui_1927at 2037.931 kb on + strandat 2037.931 kb on + strand, within Dsui_1927at 2037.939 kb on - strand, within Dsui_1927at 2037.939 kb on - strand, within Dsui_1927at 2037.939 kb on - strand, within Dsui_1927at 2037.939 kb on - strand, within Dsui_1927at 2037.939 kb on - strand, within Dsui_1927at 2038.006 kb on - strand, within Dsui_1927at 2038.020 kb on - strand, within Dsui_1927at 2038.063 kb on + strand, within Dsui_1927

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Per-strain Table

Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
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2,035,778 + Dsui_1925 0.44 -0.0
2,035,793 + Dsui_1925 0.45 +1.4
2,035,816 - -1.8
2,035,860 + -0.0
2,035,891 + Dsui_1925 0.50 +0.2
2,035,958 + Dsui_1925 0.54 -3.0
2,035,986 + Dsui_1925 0.56 -0.4
2,036,004 - -3.0
2,036,012 + Dsui_1925 0.57 +2.2
2,036,029 - +0.0
2,036,088 + Dsui_1925 0.62 -3.5
2,036,088 + Dsui_1925 0.62 +0.3
2,036,176 + Dsui_1925 0.67 -0.6
2,036,204 - -1.4
2,036,245 - -1.3
2,036,252 + Dsui_1925 0.71 +0.8
2,036,257 + Dsui_1925 0.71 +0.4
2,036,265 - Dsui_1925 0.72 -2.3
2,036,358 - Dsui_1925 0.77 -0.1
2,036,446 + Dsui_1925 0.82 +0.6
2,036,506 + Dsui_1925 0.86 +0.7
2,036,506 + Dsui_1925 0.86 +0.0
2,036,506 + Dsui_1925 0.86 -0.2
2,036,594 + -1.4
2,036,700 - -3.2
2,036,710 + +1.0
2,036,778 + +0.2
2,036,778 + -0.5
2,036,783 + Dsui_1926 0.11 +1.2
2,036,835 + Dsui_1926 0.27 +1.1
2,036,861 - -3.2
2,036,976 - -1.5
2,036,986 + Dsui_1926 0.75 +0.3
2,036,996 + Dsui_1926 0.78 +0.7
2,037,101 - +0.1
2,037,248 + -2.5
2,037,254 + +0.6
2,037,254 + -1.0
2,037,254 + +1.9
2,037,276 - +1.5
2,037,287 + +0.4
2,037,294 - -0.7
2,037,310 - +1.8
2,037,380 + -1.8
2,037,380 + -0.8
2,037,403 + -0.2
2,037,461 + +0.3
2,037,469 - +0.0
2,037,471 + +1.4
2,037,471 + -0.6
2,037,479 - -1.4
2,037,481 + +0.7
2,037,481 + -0.2
2,037,481 + +0.1
2,037,489 - -0.4
2,037,489 - +0.4
2,037,489 - -0.2
2,037,489 - +1.7
2,037,489 - -0.5
2,037,489 - +0.0
2,037,489 - +0.6
2,037,491 + +0.8
2,037,513 - +0.1
2,037,536 - +0.6
2,037,600 - +0.5
2,037,602 + +1.9
2,037,602 + +0.7
2,037,607 + +1.0
2,037,607 + +0.5
2,037,610 - +0.5
2,037,610 - +1.2
2,037,615 - +2.7
2,037,619 + -0.7
2,037,643 + -1.0
2,037,650 - +1.1
2,037,667 + -1.4
2,037,668 + +0.1
2,037,668 + -1.3
2,037,676 - -1.8
2,037,715 + -1.2
2,037,734 + +0.7
2,037,747 - -0.0
2,037,747 - -0.1
2,037,775 - +0.2
2,037,777 + +0.9
2,037,793 + -2.1
2,037,793 + -2.4
2,037,793 + -1.1
2,037,801 - +0.9
2,037,906 - -1.9
2,037,907 + Dsui_1927 0.15 -0.7
2,037,910 + Dsui_1927 0.15 +0.7
2,037,910 + +1.3
2,037,912 + Dsui_1927 0.16 -0.3
2,037,912 + Dsui_1927 0.16 +0.9
2,037,912 + Dsui_1927 0.16 +0.6
2,037,912 + -0.5
2,037,912 + Dsui_1927 0.16 +0.3
2,037,920 - Dsui_1927 0.17 +0.7
2,037,920 - Dsui_1927 0.17 -4.3
2,037,920 - Dsui_1927 0.17 -0.1
2,037,920 - Dsui_1927 0.17 -0.0
2,037,920 - Dsui_1927 0.17 -1.6
2,037,920 - Dsui_1927 0.17 +1.8
2,037,920 - Dsui_1927 0.17 +0.5
2,037,920 - Dsui_1927 0.17 +0.1
2,037,925 - Dsui_1927 0.18 +0.6
2,037,927 - Dsui_1927 0.18 +1.2
2,037,929 + Dsui_1927 0.18 +0.5
2,037,931 + +2.9
2,037,931 + Dsui_1927 0.18 -1.2
2,037,939 - Dsui_1927 0.20 +1.2
2,037,939 - Dsui_1927 0.20 +0.2
2,037,939 - Dsui_1927 0.20 -0.6
2,037,939 - Dsui_1927 0.20 -0.0
2,037,939 - Dsui_1927 0.20 -0.5
2,038,006 - Dsui_1927 0.30 +1.8
2,038,020 - Dsui_1927 0.32 +2.0
2,038,063 + Dsui_1927 0.38 -0.8

Or see this region's nucleotide sequence