Strain Fitness in Dechlorosoma suillum PS around Dsui_1806

Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1803 and Dsui_1804 are separated by 237 nucleotidesDsui_1804 and Dsui_1805 are separated by 14 nucleotidesDsui_1805 and Dsui_1806 are separated by 228 nucleotidesDsui_1806 and Dsui_1807 are separated by 101 nucleotidesDsui_1807 and Dsui_1809 are separated by 385 nucleotides Dsui_1803: Dsui_1803 - 16S ribosomal RNA, at 1,901,384 to 1,902,805 _1803 Dsui_1804: Dsui_1804 - tRNA-Ile, at 1,903,043 to 1,903,119 _1804 Dsui_1805: Dsui_1805 - tRNA-Ala, at 1,903,134 to 1,903,209 _1805 Dsui_1806: Dsui_1806 - 23S ribosomal RNA, at 1,903,438 to 1,906,319 _1806 Dsui_1807: Dsui_1807 - 5S ribosomal RNA, at 1,906,421 to 1,906,534 _1807 Dsui_1809: Dsui_1809 - DNA polymerase III, subunit gamma/tau, at 1,906,920 to 1,908,566 _1809 Position (kb) 1903 1904 1905 1906 1907Strain fitness (log2 ratio) -1 0 1at 1906.553 kb on + strandat 1906.554 kb on + strandat 1906.564 kb on + strandat 1906.604 kb on + strandat 1906.658 kb on - strandat 1906.715 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
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1,906,553 + +0.3
1,906,554 + +0.8
1,906,564 + -0.4
1,906,604 + +0.8
1,906,658 - +0.9
1,906,715 - -0.6

Or see this region's nucleotide sequence