Strain Fitness in Dechlorosoma suillum PS around Dsui_1574

Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1572 and Dsui_1573 are separated by 141 nucleotidesDsui_1573 and Dsui_1574 are separated by 82 nucleotidesDsui_1574 and Dsui_1575 are separated by 64 nucleotides Dsui_1572: Dsui_1572 - hypothetical protein, at 1,644,889 to 1,645,296 _1572 Dsui_1573: Dsui_1573 - phosphate transport system regulatory protein PhoU, at 1,645,438 to 1,646,148 _1573 Dsui_1574: Dsui_1574 - ribose 5-phosphate isomerase, at 1,646,231 to 1,646,902 _1574 Dsui_1575: Dsui_1575 - hypothetical protein, at 1,646,967 to 1,648,655 _1575 Position (kb) 1646 1647Strain fitness (log2 ratio) -1 0 1at 1645.408 kb on + strandat 1646.174 kb on - strandat 1646.236 kb on + strandat 1646.254 kb on + strandat 1647.083 kb on + strandat 1647.127 kb on - strandat 1647.259 kb on + strand, within Dsui_1575at 1647.262 kb on - strand, within Dsui_1575at 1647.267 kb on - strand, within Dsui_1575at 1647.342 kb on - strand, within Dsui_1575at 1647.423 kb on + strand, within Dsui_1575at 1647.529 kb on + strand, within Dsui_1575at 1647.566 kb on + strand, within Dsui_1575at 1647.567 kb on + strand, within Dsui_1575at 1647.689 kb on + strand, within Dsui_1575at 1647.726 kb on + strand, within Dsui_1575at 1647.786 kb on + strand, within Dsui_1575at 1647.823 kb on - strand, within Dsui_1575at 1647.884 kb on + strand, within Dsui_1575

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Per-strain Table

Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
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1,645,408 + +0.0
1,646,174 - +1.1
1,646,236 + +0.2
1,646,254 + -0.3
1,647,083 + +0.1
1,647,127 - +1.2
1,647,259 + Dsui_1575 0.17 -0.4
1,647,262 - Dsui_1575 0.17 +1.1
1,647,267 - Dsui_1575 0.18 +1.2
1,647,342 - Dsui_1575 0.22 +0.7
1,647,423 + Dsui_1575 0.27 +0.6
1,647,529 + Dsui_1575 0.33 -0.4
1,647,566 + Dsui_1575 0.35 -1.3
1,647,567 + Dsui_1575 0.36 +1.1
1,647,689 + Dsui_1575 0.43 +0.0
1,647,726 + Dsui_1575 0.45 +0.4
1,647,786 + Dsui_1575 0.48 -0.2
1,647,823 - Dsui_1575 0.51 +0.5
1,647,884 + Dsui_1575 0.54 +1.6

Or see this region's nucleotide sequence