Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1324 and Dsui_1325 are separated by 159 nucleotides Dsui_1325 and Dsui_1326 are separated by 54 nucleotides Dsui_1326 and Dsui_1327 are separated by 119 nucleotides Dsui_1327 and Dsui_1328 are separated by 21 nucleotides
Dsui_1324: Dsui_1324 - prolyl-tRNA synthetase, family II, at 1,383,669 to 1,385,381
_1324
Dsui_1325: Dsui_1325 - ADP-ribose pyrophosphatase, at 1,385,541 to 1,386,065
_1325
Dsui_1326: Dsui_1326 - putative signal-transduction protein containing cAMP-binding and CBS domains, at 1,386,120 to 1,386,731
_1326
Dsui_1327: Dsui_1327 - CNP1-like family, at 1,386,851 to 1,387,348
_1327
Dsui_1328: Dsui_1328 - ubiquinone biosynthesis protein COQ7, at 1,387,370 to 1,387,993
_1328
Position (kb)
1386
1387 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1385.442 kb on - strand at 1385.442 kb on - strand at 1385.541 kb on - strand at 1385.556 kb on + strand at 1385.645 kb on + strand, within Dsui_1325 at 1385.653 kb on - strand, within Dsui_1325 at 1385.656 kb on + strand, within Dsui_1325 at 1385.719 kb on - strand, within Dsui_1325 at 1385.894 kb on + strand, within Dsui_1325 at 1385.973 kb on - strand, within Dsui_1325 at 1386.009 kb on - strand, within Dsui_1325 at 1386.031 kb on + strand at 1386.031 kb on + strand at 1386.084 kb on + strand at 1386.084 kb on + strand at 1386.084 kb on + strand at 1386.092 kb on - strand at 1386.111 kb on - strand at 1386.112 kb on - strand at 1386.137 kb on + strand at 1386.137 kb on + strand at 1386.178 kb on + strand at 1386.215 kb on - strand, within Dsui_1326 at 1386.218 kb on + strand, within Dsui_1326 at 1386.218 kb on + strand, within Dsui_1326 at 1386.220 kb on - strand, within Dsui_1326 at 1386.220 kb on - strand, within Dsui_1326 at 1386.223 kb on + strand, within Dsui_1326 at 1386.239 kb on + strand, within Dsui_1326 at 1386.247 kb on - strand, within Dsui_1326 at 1386.274 kb on + strand, within Dsui_1326 at 1386.274 kb on + strand, within Dsui_1326 at 1386.274 kb on + strand, within Dsui_1326 at 1386.293 kb on + strand, within Dsui_1326 at 1386.305 kb on - strand, within Dsui_1326 at 1386.305 kb on - strand, within Dsui_1326 at 1386.311 kb on + strand, within Dsui_1326 at 1386.311 kb on + strand, within Dsui_1326 at 1386.311 kb on + strand, within Dsui_1326 at 1386.319 kb on - strand, within Dsui_1326 at 1386.319 kb on - strand, within Dsui_1326 at 1386.319 kb on - strand, within Dsui_1326 at 1386.330 kb on + strand, within Dsui_1326 at 1386.393 kb on + strand, within Dsui_1326 at 1386.425 kb on + strand, within Dsui_1326 at 1386.425 kb on + strand, within Dsui_1326 at 1386.448 kb on - strand, within Dsui_1326 at 1386.482 kb on - strand at 1386.660 kb on + strand, within Dsui_1326 at 1386.660 kb on + strand, within Dsui_1326 at 1386.668 kb on - strand, within Dsui_1326 at 1386.668 kb on - strand, within Dsui_1326 at 1386.678 kb on - strand at 1386.678 kb on - strand at 1386.678 kb on - strand at 1386.681 kb on + strand at 1386.741 kb on + strand at 1386.755 kb on + strand at 1386.760 kb on + strand at 1386.765 kb on + strand at 1386.766 kb on + strand at 1386.774 kb on - strand at 1386.821 kb on + strand at 1386.822 kb on + strand at 1386.829 kb on - strand at 1386.832 kb on + strand at 1386.842 kb on + strand at 1386.842 kb on - strand at 1386.848 kb on + strand at 1386.881 kb on + strand at 1386.881 kb on + strand at 1386.889 kb on - strand at 1386.893 kb on + strand at 1386.893 kb on + strand at 1386.893 kb on + strand at 1386.925 kb on + strand, within Dsui_1327 at 1386.937 kb on + strand, within Dsui_1327 at 1386.937 kb on + strand, within Dsui_1327 at 1386.967 kb on + strand, within Dsui_1327 at 1386.975 kb on - strand, within Dsui_1327 at 1386.991 kb on + strand, within Dsui_1327 at 1387.004 kb on + strand, within Dsui_1327 at 1387.004 kb on + strand, within Dsui_1327 at 1387.004 kb on + strand, within Dsui_1327 at 1387.013 kb on + strand, within Dsui_1327 at 1387.013 kb on - strand, within Dsui_1327 at 1387.013 kb on - strand, within Dsui_1327 at 1387.013 kb on - strand, within Dsui_1327 at 1387.013 kb on - strand, within Dsui_1327 at 1387.020 kb on + strand, within Dsui_1327 at 1387.047 kb on + strand, within Dsui_1327 at 1387.055 kb on - strand, within Dsui_1327 at 1387.085 kb on + strand, within Dsui_1327 at 1387.093 kb on - strand, within Dsui_1327 at 1387.110 kb on + strand, within Dsui_1327 at 1387.118 kb on + strand, within Dsui_1327 at 1387.126 kb on - strand, within Dsui_1327 at 1387.150 kb on - strand, within Dsui_1327 at 1387.169 kb on + strand, within Dsui_1327 at 1387.169 kb on + strand, within Dsui_1327 at 1387.177 kb on - strand, within Dsui_1327 at 1387.179 kb on + strand, within Dsui_1327 at 1387.186 kb on + strand, within Dsui_1327 at 1387.191 kb on + strand, within Dsui_1327 at 1387.199 kb on - strand, within Dsui_1327 at 1387.199 kb on - strand, within Dsui_1327 at 1387.204 kb on - strand, within Dsui_1327 at 1387.214 kb on - strand, within Dsui_1327 at 1387.219 kb on - strand, within Dsui_1327 at 1387.224 kb on - strand, within Dsui_1327 at 1387.292 kb on + strand, within Dsui_1327 at 1387.292 kb on + strand, within Dsui_1327 at 1387.292 kb on + strand, within Dsui_1327 at 1387.292 kb on + strand, within Dsui_1327 at 1387.292 kb on + strand, within Dsui_1327 at 1387.295 kb on - strand, within Dsui_1327 at 1387.298 kb on - strand, within Dsui_1327 at 1387.300 kb on - strand at 1387.300 kb on - strand at 1387.300 kb on - strand at 1387.300 kb on - strand at 1387.300 kb on - strand at 1387.300 kb on - strand at 1387.300 kb on - strand at 1387.300 kb on - strand at 1387.319 kb on - strand at 1387.326 kb on + strand at 1387.348 kb on + strand at 1387.355 kb on + strand at 1387.360 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 1,385,442 - -0.8 1,385,442 - -1.9 1,385,541 - -1.6 1,385,556 + -4.2 1,385,645 + Dsui_1325 0.20 -3.7 1,385,653 - Dsui_1325 0.21 -1.6 1,385,656 + Dsui_1325 0.22 +0.5 1,385,719 - Dsui_1325 0.34 -1.8 1,385,894 + Dsui_1325 0.67 -0.8 1,385,973 - Dsui_1325 0.82 -3.0 1,386,009 - Dsui_1325 0.89 -1.9 1,386,031 + +0.7 1,386,031 + +1.7 1,386,084 + +2.1 1,386,084 + +1.4 1,386,084 + +1.7 1,386,092 - +0.9 1,386,111 - -1.3 1,386,112 - -3.9 1,386,137 + +0.5 1,386,137 + +0.6 1,386,178 + +0.6 1,386,215 - Dsui_1326 0.16 -0.7 1,386,218 + Dsui_1326 0.16 +0.9 1,386,218 + Dsui_1326 0.16 +0.4 1,386,220 - Dsui_1326 0.16 +0.2 1,386,220 - Dsui_1326 0.16 -3.7 1,386,223 + Dsui_1326 0.17 +0.6 1,386,239 + Dsui_1326 0.19 +0.5 1,386,247 - Dsui_1326 0.21 -1.2 1,386,274 + Dsui_1326 0.25 +1.2 1,386,274 + Dsui_1326 0.25 +0.9 1,386,274 + Dsui_1326 0.25 +0.9 1,386,293 + Dsui_1326 0.28 -1.0 1,386,305 - Dsui_1326 0.30 -2.3 1,386,305 - Dsui_1326 0.30 -0.9 1,386,311 + Dsui_1326 0.31 +2.5 1,386,311 + Dsui_1326 0.31 +0.9 1,386,311 + Dsui_1326 0.31 +0.4 1,386,319 - Dsui_1326 0.33 -4.7 1,386,319 - Dsui_1326 0.33 -3.3 1,386,319 - Dsui_1326 0.33 -1.6 1,386,330 + Dsui_1326 0.34 -3.0 1,386,393 + Dsui_1326 0.45 +0.5 1,386,425 + Dsui_1326 0.50 +0.9 1,386,425 + Dsui_1326 0.50 +0.4 1,386,448 - Dsui_1326 0.54 -0.9 1,386,482 - -1.3 1,386,660 + Dsui_1326 0.88 +1.6 1,386,660 + Dsui_1326 0.88 +0.2 1,386,668 - Dsui_1326 0.90 -0.6 1,386,668 - Dsui_1326 0.90 -2.8 1,386,678 - -0.7 1,386,678 - -0.9 1,386,678 - -0.2 1,386,681 + +1.0 1,386,741 + -0.8 1,386,755 + +0.3 1,386,760 + +0.1 1,386,765 + +1.1 1,386,766 + +1.7 1,386,774 - -1.8 1,386,821 + +2.5 1,386,822 + +0.3 1,386,829 - -0.8 1,386,832 + +0.8 1,386,842 + -0.3 1,386,842 - -3.7 1,386,848 + +1.5 1,386,881 + +1.2 1,386,881 + +0.6 1,386,889 - +3.0 1,386,893 + +0.8 1,386,893 + +0.4 1,386,893 + +0.6 1,386,925 + Dsui_1327 0.15 +1.1 1,386,937 + Dsui_1327 0.17 +1.5 1,386,937 + Dsui_1327 0.17 +1.3 1,386,967 + Dsui_1327 0.23 +0.6 1,386,975 - Dsui_1327 0.25 -0.6 1,386,991 + Dsui_1327 0.28 +0.3 1,387,004 + Dsui_1327 0.31 -0.1 1,387,004 + Dsui_1327 0.31 +0.1 1,387,004 + Dsui_1327 0.31 -0.3 1,387,013 + Dsui_1327 0.33 +0.7 1,387,013 - Dsui_1327 0.33 -3.6 1,387,013 - Dsui_1327 0.33 -1.5 1,387,013 - Dsui_1327 0.33 -1.0 1,387,013 - Dsui_1327 0.33 -3.2 1,387,020 + Dsui_1327 0.34 +0.3 1,387,047 + Dsui_1327 0.39 -0.3 1,387,055 - Dsui_1327 0.41 -1.3 1,387,085 + Dsui_1327 0.47 +1.1 1,387,093 - Dsui_1327 0.49 -4.1 1,387,110 + Dsui_1327 0.52 +0.5 1,387,118 + Dsui_1327 0.54 +1.1 1,387,126 - Dsui_1327 0.55 -1.2 1,387,150 - Dsui_1327 0.60 -1.9 1,387,169 + Dsui_1327 0.64 +0.6 1,387,169 + Dsui_1327 0.64 +1.1 1,387,177 - Dsui_1327 0.65 -1.8 1,387,179 + Dsui_1327 0.66 +1.2 1,387,186 + Dsui_1327 0.67 +0.3 1,387,191 + Dsui_1327 0.68 +0.8 1,387,199 - Dsui_1327 0.70 +0.9 1,387,199 - Dsui_1327 0.70 -0.6 1,387,204 - Dsui_1327 0.71 +0.6 1,387,214 - Dsui_1327 0.73 +1.5 1,387,219 - Dsui_1327 0.74 -1.5 1,387,224 - Dsui_1327 0.75 -2.0 1,387,292 + Dsui_1327 0.89 +1.5 1,387,292 + Dsui_1327 0.89 +1.2 1,387,292 + Dsui_1327 0.89 +1.4 1,387,292 + Dsui_1327 0.89 +1.4 1,387,292 + Dsui_1327 0.89 -3.4 1,387,295 - Dsui_1327 0.89 -0.3 1,387,298 - Dsui_1327 0.90 -0.3 1,387,300 - +0.3 1,387,300 - -1.6 1,387,300 - -4.4 1,387,300 - +0.0 1,387,300 - -3.5 1,387,300 - -3.3 1,387,300 - -1.0 1,387,300 - -3.5 1,387,319 - +0.9 1,387,326 + +1.0 1,387,348 + +0.2 1,387,355 + +0.7 1,387,360 + +0.8
Or see this region's nucleotide sequence