Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0970 and Dsui_0971 are separated by 73 nucleotides Dsui_0971 and Dsui_0972 are separated by 18 nucleotides
Dsui_0970: Dsui_0970 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 995,477 to 996,766
_0970
Dsui_0971: Dsui_0971 - poly(R)-hydroxyalkanoic acid synthase, class I, at 996,840 to 998,669
_0971
Dsui_0972: Dsui_0972 - Zn-dependent hydrolase, glyoxylase, at 998,688 to 999,722
_0972
Position (kb) 996
997
998
999 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 996.113 kb on + strand, within Dsui_0970 at 996.135 kb on + strand, within Dsui_0970 at 996.144 kb on - strand, within Dsui_0970 at 996.230 kb on - strand at 996.247 kb on - strand, within Dsui_0970 at 996.299 kb on - strand, within Dsui_0970 at 996.307 kb on - strand, within Dsui_0970 at 996.312 kb on - strand, within Dsui_0970 at 996.321 kb on + strand, within Dsui_0970 at 996.422 kb on + strand, within Dsui_0970 at 996.576 kb on + strand, within Dsui_0970 at 996.595 kb on - strand, within Dsui_0970 at 996.727 kb on + strand at 997.319 kb on + strand, within Dsui_0971 at 997.319 kb on + strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.332 kb on - strand, within Dsui_0971 at 997.344 kb on - strand, within Dsui_0971 at 997.418 kb on + strand, within Dsui_0971 at 997.452 kb on - strand, within Dsui_0971 at 997.509 kb on - strand, within Dsui_0971 at 997.570 kb on - strand, within Dsui_0971 at 997.630 kb on + strand, within Dsui_0971 at 997.643 kb on - strand, within Dsui_0971 at 997.660 kb on - strand, within Dsui_0971 at 997.821 kb on - strand, within Dsui_0971 at 997.862 kb on + strand, within Dsui_0971 at 997.862 kb on + strand, within Dsui_0971 at 997.902 kb on + strand, within Dsui_0971 at 997.944 kb on - strand, within Dsui_0971 at 997.949 kb on - strand, within Dsui_0971 at 998.020 kb on - strand, within Dsui_0971 at 998.102 kb on + strand, within Dsui_0971 at 998.110 kb on - strand, within Dsui_0971 at 998.123 kb on - strand, within Dsui_0971 at 998.172 kb on - strand, within Dsui_0971 at 998.252 kb on - strand, within Dsui_0971 at 998.278 kb on + strand, within Dsui_0971 at 998.288 kb on + strand, within Dsui_0971 at 998.325 kb on - strand, within Dsui_0971 at 998.595 kb on - strand at 998.608 kb on + strand at 998.723 kb on - strand at 998.746 kb on - strand at 998.770 kb on - strand at 999.104 kb on - strand, within Dsui_0972 at 999.141 kb on - strand, within Dsui_0972 at 999.141 kb on - strand, within Dsui_0972 at 999.172 kb on + strand, within Dsui_0972 at 999.208 kb on - strand, within Dsui_0972 at 999.281 kb on + strand, within Dsui_0972 at 999.305 kb on + strand, within Dsui_0972 at 999.333 kb on - strand, within Dsui_0972 at 999.411 kb on - strand, within Dsui_0972 at 999.431 kb on + strand, within Dsui_0972 at 999.508 kb on - strand, within Dsui_0972 at 999.510 kb on + strand, within Dsui_0972 at 999.632 kb on - strand at 999.635 kb on + strand at 999.643 kb on - strand at 999.662 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 996,113 + Dsui_0970 0.49 +0.1 996,135 + Dsui_0970 0.51 -1.0 996,144 - Dsui_0970 0.52 -1.6 996,230 - -1.8 996,247 - Dsui_0970 0.60 -0.7 996,299 - Dsui_0970 0.64 +0.5 996,307 - Dsui_0970 0.64 -1.9 996,312 - Dsui_0970 0.65 +0.5 996,321 + Dsui_0970 0.65 +1.0 996,422 + Dsui_0970 0.73 +0.3 996,576 + Dsui_0970 0.85 +0.4 996,595 - Dsui_0970 0.87 +0.4 996,727 + +0.4 997,319 + Dsui_0971 0.26 -0.7 997,319 + Dsui_0971 0.26 +0.0 997,327 - Dsui_0971 0.27 -3.3 997,327 - Dsui_0971 0.27 -1.0 997,327 - Dsui_0971 0.27 -0.8 997,327 - Dsui_0971 0.27 +0.3 997,327 - Dsui_0971 0.27 -1.4 997,327 - Dsui_0971 0.27 -3.5 997,327 - Dsui_0971 0.27 -4.3 997,327 - Dsui_0971 0.27 -2.0 997,332 - Dsui_0971 0.27 -2.9 997,344 - Dsui_0971 0.28 -2.8 997,418 + Dsui_0971 0.32 -0.3 997,452 - Dsui_0971 0.33 +1.0 997,509 - Dsui_0971 0.37 -3.9 997,570 - Dsui_0971 0.40 -3.1 997,630 + Dsui_0971 0.43 -1.8 997,643 - Dsui_0971 0.44 -2.8 997,660 - Dsui_0971 0.45 -2.0 997,821 - Dsui_0971 0.54 -1.7 997,862 + Dsui_0971 0.56 +0.1 997,862 + Dsui_0971 0.56 -1.1 997,902 + Dsui_0971 0.58 -2.3 997,944 - Dsui_0971 0.60 -1.0 997,949 - Dsui_0971 0.61 -3.1 998,020 - Dsui_0971 0.64 -1.5 998,102 + Dsui_0971 0.69 -1.9 998,110 - Dsui_0971 0.69 -0.2 998,123 - Dsui_0971 0.70 -0.6 998,172 - Dsui_0971 0.73 -1.1 998,252 - Dsui_0971 0.77 -1.5 998,278 + Dsui_0971 0.79 -3.3 998,288 + Dsui_0971 0.79 +0.6 998,325 - Dsui_0971 0.81 -0.9 998,595 - -3.1 998,608 + -1.4 998,723 - -0.0 998,746 - -1.0 998,770 - +0.0 999,104 - Dsui_0972 0.40 +0.9 999,141 - Dsui_0972 0.44 +2.0 999,141 - Dsui_0972 0.44 +1.0 999,172 + Dsui_0972 0.47 -3.4 999,208 - Dsui_0972 0.50 +1.3 999,281 + Dsui_0972 0.57 -2.6 999,305 + Dsui_0972 0.60 +0.2 999,333 - Dsui_0972 0.62 -2.2 999,411 - Dsui_0972 0.70 +0.6 999,431 + Dsui_0972 0.72 +1.0 999,508 - Dsui_0972 0.79 +0.4 999,510 + Dsui_0972 0.79 -1.8 999,632 - -3.9 999,635 + +0.1 999,643 - +1.6 999,662 + +0.2
Or see this region's nucleotide sequence